Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0346131 Helianthus annuus HOM05D003018 ORTHO05D003402 9.1e-101 370.2 177 100.0
HanXRQChr11g0346471 Helianthus annuus HOM05D003018 ORTHO05D003402 4.6e-36 155.2 157 49.0
ECA248G0015 Erigeron canadensis HOM05D003018 ORTHO05D003402 4.8e-17 92.0 150 40.7
HanXRQChr10g0283991 Helianthus annuus HOM05D003018 ORTHO05D003402 1.2e-12 77.4 163 38.7
Lsat_1_v5_gn_2_135421 Lactuca sativa HOM05D003018 ORTHO05D003402 1.6e-12 77.0 161 36.0
HanXRQChr16g0499771 Helianthus annuus HOM05D003018 ORTHO05D003402 2.7e-12 76.3 163 38.7
Dinv17276 Davidia involucrata HOM05D003018 ORTHO05D003402 4.6e-12 75.5 156 36.5
Dinv29191 Davidia involucrata HOM05D003018 ORTHO05D003402 4.6e-12 75.5 155 36.8
ECA232G4756 Erigeron canadensis HOM05D003018 ORTHO05D003402 6.1e-12 75.1 156 37.8
SalBow4G0431 Salvia bowleyana HOM05D003018 ORTHO05D003402 7.9e-12 74.7 165 35.8
CSS0041512 Camellia sinensis var. sinensis HOM05D003018 ORTHO05D003402 1.8e-11 73.6 155 36.1
ECA248G1111 Erigeron canadensis HOM05D001208 ORTHO05D001593 2.3e-11 73.2 68 51.5
TAR374G1266 Trochodendron aralioides HOM05D003018 ORTHO05D003402 2.3e-11 73.2 159 36.5
ECA248G2250 Erigeron canadensis HOM05D003018 ORTHO05D003402 3.0e-11 72.8 68 50.0
Lj3C891T18 Lonicera japonica HOM05D003018 ORTHO05D003402 3.9e-11 72.4 156 36.5
Migut.F00968 Erythranthe guttata HOM05D003018 ORTHO05D003402 5.1e-11 72.0 157 35.0
Nn2g15903 Nelumbo nucifera HOM05D003018 ORTHO05D003402 5.1e-11 72.0 163 34.4
QL09p005993 Quercus lobata HOM05D003018 ORTHO05D003402 5.1e-11 72.0 155 35.5
Actinidia34288 Actinidia chinensis HOM05D003018 ORTHO05D003402 6.7e-11 71.6 163 35.0
Glyma.06G139200 Glycine max HOM05D003018 ORTHO05D003402 6.7e-11 71.6 173 33.5
SGA_v2.0_scaffold165G38214 Striga asiatica HOM05D003018 ORTHO05D003402 8.7e-11 71.2 164 33.5
CDE02G1646 Ceratophyllum demersum HOM05D003018 ORTHO05D003402 1.1e-10 70.9 171 35.1
Actinidia08721 Actinidia chinensis HOM05D003018 ORTHO05D003402 1.5e-10 70.5 163 35.0
Migut.F00122 Erythranthe guttata HOM05D003018 ORTHO05D003402 1.5e-10 70.5 156 34.0
Glyma.04G225600 Glycine max HOM05D003018 ORTHO05D003402 1.5e-10 70.5 173 32.9
Nitab4.5_0007121g0040 Nicotiana tabacum HOM05D003018 ORTHO05D003402 1.5e-10 70.5 179 34.1
TAR375G0624 Trochodendron aralioides HOM05D003018 ORTHO05D003402 1.5e-10 70.5 168 34.5
MSTRG.26952 Avicennia marina HOM05D003018 ORTHO05D003402 1.9e-10 70.1 163 32.5
RcHm_v2.0_Chr1g0383311 Rosa chinensis HOM05D003018 ORTHO05D003402 1.9e-10 70.1 156 35.9
Potri.012G004600 Populus trichocarpa HOM05D003018 ORTHO05D003402 2.5e-10 69.7 157 32.5
Duzib205G1477 Durio zibethinus HOM05D003018 ORTHO05D003402 3.3e-10 69.3 163 33.1
MD01G1231500 Malus domestica HOM05D003018 ORTHO05D003402 3.3e-10 69.3 156 35.3
Gohir.A12G244400 Gossypium hirsutum HOM05D003018 ORTHO05D003402 4.3e-10 68.9 163 34.4
HPP92_007053 Vanilla planifolia HOM05D003018 ORTHO05D003402 4.3e-10 68.9 155 34.2
GSVIVG01038683001 Vitis vinifera HOM05D003018 ORTHO05D003402 4.3e-10 68.9 84 47.6
Gohir.D12G245300 Gossypium hirsutum HOM05D003018 ORTHO05D003402 5.7e-10 68.6 163 34.4
Gorai.008G262900 Gossypium raimondii HOM05D003018 ORTHO05D003402 5.7e-10 68.6 163 34.4
PSO017G1017 Papaver somniferum HOM05D003018 ORTHO05D003402 5.7e-10 68.6 159 35.2
PSO478G2764 Papaver somniferum HOM05D003018 ORTHO05D003402 5.7e-10 68.6 159 35.2
Sed0009908 Sechium edule HOM05D003018 ORTHO05D003402 5.7e-10 68.6 155 34.8
CDE06G0409 Ceratophyllum demersum HOM05D003018 ORTHO05D003402 7.4e-10 68.2 167 32.9
Ciclev10021773m.g Citrus clementina HOM05D003018 ORTHO05D003402 7.4e-10 68.2 157 33.8
Prupe.2G322200 Prunus persica HOM05D003018 ORTHO05D003402 7.4e-10 68.2 156 35.3
Atru.chr12.2500 Acer truncatum HOM05D003018 ORTHO05D003402 9.7e-10 67.8 156 34.6
Atru.chr12.2524 Acer truncatum HOM05D003018 ORTHO05D003402 9.7e-10 67.8 156 34.6
MELO3C005915.2 Cucumis melo HOM05D003018 ORTHO05D003402 9.7e-10 67.8 155 35.5
DCAR_010557 Daucus carota HOM05D003018 ORTHO05D003402 9.7e-10 67.8 76 48.7
Duzib084G0455 Durio zibethinus HOM05D003018 ORTHO05D003402 9.7e-10 67.8 165 33.3
Lsat_1_v5_gn_0_9661 Lactuca sativa HOM05D003018 ORTHO05D003402 9.7e-10 67.8 157 34.4
Nitab4.5_0000021g0210 Nicotiana tabacum HOM05D003018 ORTHO05D003402 9.7e-10 67.8 99 42.4
ATR0582G341 Amborella trichopoda HOM05D003018 ORTHO05D003402 1.3e-09 67.4 155 34.2
CsaV3_5G000150 Cucumis sativus L. HOM05D003018 ORTHO05D003402 1.3e-09 67.4 156 35.3
Lsat_1_v5_gn_8_4220 Lactuca sativa HOM05D003018 ORTHO05D003402 1.3e-09 67.4 155 33.5
MD07G1303500 Malus domestica HOM05D003018 ORTHO05D003402 1.3e-09 67.4 155 34.8
Potri.015G000600 Populus trichocarpa HOM05D003018 ORTHO05D003402 1.3e-09 67.4 155 32.3
Sed0018717 Sechium edule HOM05D003018 ORTHO05D003402 1.3e-09 67.4 74 48.6
FAN10G1538 Fragaria x ananassa HOM05D003018 ORTHO05D003402 1.6e-09 67.0 87 43.7
PGR042G2079 Punica granatum HOM05D003018 ORTHO05D003402 1.6e-09 67.0 155 34.8
Cc02_g00590 Coffea canephora HOM05D003018 ORTHO05D003402 2.2e-09 66.6 79 46.8
Oeu017358.1 Olea europaea HOM05D003018 ORTHO05D003402 2.2e-09 66.6 155 34.2
CAN.G303.60 Capsicum annuum HOM05D003018 ORTHO05D003402 2.8e-09 66.2 84 45.2
Lalb_Chr23g0272051 Lupinus albus HOM05D003018 ORTHO05D003402 2.8e-09 66.2 179 31.3
Sabra15G0000400 Salix brachista HOM05D003018 ORTHO05D003402 2.8e-09 66.2 155 32.3
Solyc03g079940.3 Solanum lycopersicum HOM05D003018 ORTHO05D003402 2.8e-09 66.2 84 45.2
Sopen03g027480 Solanum pennellii HOM05D003018 ORTHO05D003402 2.8e-09 66.2 84 45.2
PGSC0003DMG400000572 Solanum tuberosum HOM05D003018 ORTHO05D003402 2.8e-09 66.2 84 45.2
Aqoxy5G02912 Aquilegia oxysepala HOM05D003018 ORTHO05D003402 3.7e-09 65.9 84 45.2
Eucgr.A00976 Eucalyptus grandis HOM05D003018 ORTHO05D003402 3.7e-09 65.9 76 47.4
Eucgr.K00480 Eucalyptus grandis HOM05D003018 ORTHO05D003402 3.7e-09 65.9 76 47.4
FvH4_7g33330 Fragaria vesca HOM05D003018 ORTHO05D003402 3.7e-09 65.9 87 42.5
FAN10G3922 Fragaria x ananassa HOM05D003018 ORTHO05D003402 3.7e-09 65.9 87 42.5
Rhsim03G0218500 Rhododendron simsii HOM05D003018 ORTHO05D003402 3.7e-09 65.9 76 47.4
Thecc.03G212100 Theobroma cacao HOM05D003018 ORTHO05D003402 3.7e-09 65.9 163 33.7
TPR.G35918 Trifolium pratense HOM05D003018 ORTHO05D003402 3.7e-09 65.9 72 44.4
vmacro06475 Vaccinium macrocarpon HOM05D003018 ORTHO05D003402 3.7e-09 65.9 76 47.4
Sc19g0000360 Simmondsia chinensis HOM05D003018 ORTHO05D003402 4.8e-09 65.5 74 47.3
CANSAT21G0709 Cannabis sativa HOM05D003018 ORTHO05D003402 8.2e-09 64.7 76 46.1
Duzib068G0518 Durio zibethinus HOM05D003018 ORTHO05D003402 8.2e-09 64.7 163 33.1
MBI07_g11061_MAGBIO Magnolia biondii HOM05D003018 ORTHO05D003402 8.2e-09 64.7 168 33.9
CDE02G1662 Ceratophyllum demersum HOM05D003018 ORTHO05D003402 1.1e-08 64.3 166 33.7
Ca_16839_v3 Cicer arietinum L. HOM05D003018 ORTHO05D003402 1.1e-08 64.3 84 44.0
FAN03G3459 Fragaria x ananassa HOM05D003018 ORTHO05D003402 1.1e-08 64.3 87 41.4
Peaxi162Scf01026g00260 Petunia axillaris HOM05D003018 ORTHO05D003402 1.1e-08 64.3 76 46.1
arahy.Tifrunner.gnm1.ann1.KA8TW6 Arachis hypogaea HOM05D003018 ORTHO05D003402 1.4e-08 63.9 164 32.3
arahy.Tifrunner.gnm1.ann1.SR3247 Arachis hypogaea HOM05D003018 ORTHO05D003402 1.4e-08 63.9 164 32.3
CiPaw.06G038200 Carya illinoinensis HOM05D003018 ORTHO05D003402 1.4e-08 63.9 89 41.6
PGR142G0210 Punica granatum HOM05D003018 ORTHO05D003402 1.4e-08 63.9 76 44.7
Gohir.D11G016900 Gossypium hirsutum HOM05D003018 ORTHO05D003402 1.8e-08 63.5 76 44.7
FAN01G2324 Fragaria x ananassa HOM05D003018 ORTHO05D003402 2.4e-08 63.2 87 40.2
Gohir.A09G187100 Gossypium hirsutum HOM05D003018 ORTHO05D003402 2.4e-08 63.2 77 42.9
Gohir.A11G017100 Gossypium hirsutum HOM05D003018 ORTHO05D003402 3.1e-08 62.8 76 44.7
Manes.05G197500 Manihot esculenta HOM05D003018 ORTHO05D003402 3.1e-08 62.8 163 31.9
Phvul.009G040400 Phaseolus vulgaris HOM05D003018 ORTHO05D003402 3.1e-08 62.8 76 43.4
Lj1g0024936 Lotus japonicus HOM05D003018 ORTHO05D003402 4.1e-08 62.4 93 37.6
Medtr3g093380 Medicago truncatula HOM05D003018 ORTHO05D003402 4.1e-08 62.4 84 40.5
TWI39G0588 Tripterygium wilfordii HOM05D003018 ORTHO05D003402 4.1e-08 62.4 84 42.9
VMungo1309G0595 Vigna mungo HOM05D003018 ORTHO05D003402 4.1e-08 62.4 156 32.7
Zm00001eb242440 Zea mays HOM05D003018 ORTHO05D003402 9.0e-08 61.2 76 43.4
Gorai.006G203900 Gossypium raimondii HOM05D003018 ORTHO05D003402 1.2e-07 60.8 77 41.6
Gorai.007G017700 Gossypium raimondii HOM05D003018 ORTHO05D003402 1.2e-07 60.8 72 44.4
EL10Ac3g05130 Beta vulgaris HOM05D003018 ORTHO05D003402 2.6e-07 59.7 76 42.1
Pp3c25_7060 Physcomitrium patens HOM05D003018 ORTHO05D003402 2.6e-07 59.7 77 46.8
unitig_62.g23859 Utricularia gibba HOM05D003018 ORTHO05D003402 2.6e-07 59.7 66 47.0
unitig_64.g29776 Utricularia gibba HOM05D000525 ORTHO05D001368 2.6e-07 59.7 66 47.0
AUR62005947 Chenopodium quinoa HOM05D003018 ORTHO05D003402 3.4e-07 59.3 76 43.4
Os04g0405100 Oryza sativa ssp. japonica HOM05D003018 ORTHO05D003402 3.4e-07 59.3 76 42.1
Zm00001eb181270 Zea mays HOM05D003018 ORTHO05D003402 3.4e-07 59.3 76 40.8
Ah.13g071050 Amaranthus hybridus HOM05D003018 ORTHO05D003402 4.5e-07 58.9 76 40.8
AUR62028118 Chenopodium quinoa HOM05D003018 ORTHO05D003402 4.5e-07 58.9 76 43.4
ECA232G1833 Erigeron canadensis HOM05D000455 ORTHO05D000434 4.5e-07 58.9 69 44.9
Lalb_Chr11g0067561 Lupinus albus HOM05D003018 ORTHO05D003402 5.9e-07 58.5 155 31.0
AL6G36250 Arabidopsis lyrata HOM05D003018 ORTHO05D003402 1.0e-06 57.8 73 46.6
Carub.0006s2250 Capsella rubella HOM05D003018 ORTHO05D003402 1.0e-06 57.8 73 46.6
CiPaw.05G208700 Carya illinoinensis HOM05D003018 ORTHO05D003402 1.7e-06 57.0 78 38.5
Sp2g22740 Schrenkiella parvula HOM05D003018 ORTHO05D003402 1.7e-06 57.0 156 31.4
AT5G24650 Arabidopsis thaliana HOM05D003018 ORTHO05D003402 2.2e-06 56.6 73 45.2
BcaNung01249 Brassica carinata HOM05D003018 ORTHO05D003402 2.2e-06 56.6 73 45.2
Haze_00335 Corylus avellana HOM05D003018 ORTHO05D003402 2.2e-06 56.6 103 37.9
Lsat_1_v5_gn_2_3400 Lactuca sativa HOM05D003018 ORTHO05D003402 2.2e-06 56.6 153 32.7
BcaNung02005 Brassica carinata HOM05D003018 ORTHO05D003402 2.9e-06 56.2 73 45.2
A06p35470 Brassica napus HOM05D003018 ORTHO05D003402 2.9e-06 56.2 73 45.2
C07p43070 Brassica napus HOM05D003018 ORTHO05D003402 2.9e-06 56.2 73 45.2
BolC7t44834H Brassica oleracea HOM05D003018 ORTHO05D003402 2.9e-06 56.2 73 45.2
BraA06t26470Z Brassica rapa HOM05D003018 ORTHO05D003402 2.9e-06 56.2 73 45.2
PSO782G4498 Papaver somniferum HOM05D003018 ORTHO05D003402 2.9e-06 56.2 86 39.5
Mapoly0083s0018 Marchantia polymorpha HOM05D003018 ORTHO05D003402 5.0e-06 55.5 75 41.3
Psat5g071120 Pisum sativum HOM05D003018 ORTHO05D003402 5.0e-06 55.5 77 40.3
THA.LOC104798993 Tarenaya hassleriana HOM05D003018 ORTHO05D003402 5.0e-06 55.5 73 43.8
Thhalv10004788m.g Eutrema salsugineum HOM05D003018 ORTHO05D003402 6.5e-06 55.1 156 31.4
Zm00001eb084410 Zea mays HOM05D003018 ORTHO05D003402 6.5e-06 55.1 71 42.3
SMO356G0102 Selaginella moellendorffii HOM05D003018 ORTHO05D003402 8.5e-06 54.7 97 36.1


User provided reference genes

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