Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0345871 Helianthus annuus HOM05D007233 ORTHO05D009043 1.5e-74 282.7 138 100.0
Lsat_1_v5_gn_1_61521 Lactuca sativa HOM05D007233 ORTHO05D009043 2.6e-63 245.4 138 87.0
ECA248G0451 Erigeron canadensis HOM05D007233 ORTHO05D009043 3.2e-53 211.8 138 73.9
SGA_v2.0_scaffold93G28323 Striga asiatica HOM05D007233 ORTHO05D009043 7.2e-45 184.1 142 60.6
CSS0019792 Camellia sinensis var. sinensis HOM05D007233 ORTHO05D009043 1.2e-44 183.3 139 64.7
SalBow3G1176 Salvia bowleyana HOM05D007233 ORTHO05D009043 1.2e-44 183.3 140 65.0
Thecc.09G294400 Theobroma cacao HOM05D007233 ORTHO05D009043 1.2e-44 183.3 136 69.1
EL10Ac9g21047 Beta vulgaris HOM05D007233 ORTHO05D009043 1.6e-44 183.0 141 63.8
TAR369G0714 Trochodendron aralioides HOM05D007233 ORTHO05D009043 4.7e-44 181.4 136 63.2
DCAR_015489 Daucus carota HOM05D007233 ORTHO05D009043 6.1e-44 181.0 137 63.5
Potri.004G190200 Populus trichocarpa HOM05D007233 ORTHO05D009043 1.0e-43 180.3 136 65.4
Cc01_g10010 Coffea canephora HOM05D007233 ORTHO05D009043 1.4e-43 179.9 142 62.0
GSVIVG01031420001 Vitis vinifera HOM05D007233 ORTHO05D009043 1.4e-43 179.9 136 60.3
Gohir.D13G228300 Gossypium hirsutum HOM05D007233 ORTHO05D009043 1.8e-43 179.5 136 67.6
Sabra04G0127900 Salix brachista HOM05D007233 ORTHO05D009043 1.8e-43 179.5 136 63.2
COL.COLO4_31139 Corchorus olitorius HOM05D007233 ORTHO05D009043 2.3e-43 179.1 136 67.6
unitig_699.g19183 Utricularia gibba HOM05D007233 ORTHO05D009043 3.0e-43 178.7 137 64.2
Migut.N02527 Erythranthe guttata HOM05D007233 ORTHO05D009043 6.8e-43 177.6 140 61.4
MSTRG.17742 Avicennia marina HOM05D007233 ORTHO05D009043 8.8e-43 177.2 140 63.6
Ciclev10030019m.g Citrus clementina HOM05D007233 ORTHO05D009043 1.2e-42 176.8 137 65.7
Peaxi162Scf00150g00710 Petunia axillaris HOM05D007233 ORTHO05D009043 2.6e-42 175.6 138 61.6
Lj3g0012043 Lotus japonicus HOM05D007233 ORTHO05D009043 3.4e-42 175.3 136 63.2
vmacro03232 Vaccinium macrocarpon HOM05D007233 ORTHO05D009043 3.4e-42 175.3 132 65.9
Manes.04G010800 Manihot esculenta HOM05D007233 ORTHO05D009043 9.8e-42 173.7 136 63.2
Phvul.011G088600 Phaseolus vulgaris HOM05D007233 ORTHO05D009043 1.7e-41 172.9 136 63.2
Rhsim13G0103700 Rhododendron simsii HOM05D007233 ORTHO05D009043 2.8e-41 172.2 132 65.9
VMungo1127G1048 Vigna mungo HOM05D007233 ORTHO05D009043 2.8e-41 172.2 136 61.8
ClCG01G013980 Citrullus lanatus HOM05D007233 ORTHO05D009043 6.3e-41 171.0 136 62.5
PGR119G2223 Punica granatum HOM05D007233 ORTHO05D009043 8.3e-41 170.6 135 63.0
Sp1g07040 Schrenkiella parvula HOM05D007233 ORTHO05D009043 1.1e-40 170.2 136 60.3
Ca_10766_v3 Cicer arietinum L. HOM05D007233 ORTHO05D009043 1.8e-40 169.5 136 62.5
AL1G18800 Arabidopsis lyrata HOM05D007233 ORTHO05D009043 3.1e-40 168.7 136 58.8
Glyma.11G190700 Glycine max HOM05D007233 ORTHO05D009043 3.1e-40 168.7 142 60.6
Lalb_Chr03g0027851 Lupinus albus HOM05D007233 ORTHO05D009043 3.1e-40 168.7 136 61.8
BcaB07g34087 Brassica carinata HOM05D007233 ORTHO05D009043 4.1e-40 168.3 136 59.6
C05p06530 Brassica napus HOM05D007233 ORTHO05D009043 4.1e-40 168.3 136 59.6
BolC5t29413H Brassica oleracea HOM05D007233 ORTHO05D009043 4.1e-40 168.3 136 59.6
CsaV3_1G014310 Cucumis sativus L. HOM05D007233 ORTHO05D009043 5.4e-40 167.9 136 61.0
THA.LOC104826400 Tarenaya hassleriana HOM05D007233 ORTHO05D009043 5.4e-40 167.9 137 59.9
Sed0016181 Sechium edule HOM05D007233 ORTHO05D009043 7.0e-40 167.5 136 61.0
CiPaw.14G104900 Carya illinoinensis HOM05D007233 ORTHO05D009043 9.1e-40 167.2 140 63.6
Hund07722 Selenicereus undatus HOM05D007233 ORTHO05D009043 9.1e-40 167.2 137 62.0
A06p05410 Brassica napus HOM05D007233 ORTHO05D009043 1.2e-39 166.8 136 58.8
BraA06t23750Z Brassica rapa HOM05D007233 ORTHO05D009043 1.2e-39 166.8 136 58.8
Aa31LG1G6480 Aethionema arabicum HOM05D007233 ORTHO05D009043 1.6e-39 166.4 139 58.3
CANSAT78G0435 Cannabis sativa HOM05D007233 ORTHO05D009043 1.6e-39 166.4 136 59.6
AUR62031769 Chenopodium quinoa HOM05D007233 ORTHO05D009043 2.7e-39 165.6 144 58.3
Thhalv10009077m.g Eutrema salsugineum HOM05D007233 ORTHO05D009043 2.7e-39 165.6 136 58.1
arahy.Tifrunner.gnm1.ann1.5NF9YD Arachis hypogaea HOM05D007233 ORTHO05D009043 3.5e-39 165.2 156 53.8
Carub.0001s0774 Capsella rubella HOM05D007233 ORTHO05D009043 3.5e-39 165.2 136 57.4
Nitab4.5_0000442g0180 Nicotiana tabacum HOM05D007233 ORTHO05D009043 4.5e-39 164.9 139 59.7
Prupe.6G116400 Prunus persica HOM05D007233 ORTHO05D009043 4.5e-39 164.9 138 59.4
QL01p014111 Quercus lobata HOM05D007233 ORTHO05D009043 4.5e-39 164.9 132 63.6
Haze_23494 Corylus avellana HOM05D007233 ORTHO05D009043 7.7e-39 164.1 140 62.9
CARHR008260 Cardamine hirsuta HOM05D007233 ORTHO05D009043 1.3e-38 163.3 139 57.6
MELO3C004843.2 Cucumis melo HOM05D007233 ORTHO05D009043 1.3e-38 163.3 136 58.8
Solyc11g066690.2 Solanum lycopersicum HOM05D007233 ORTHO05D009043 2.2e-38 162.5 138 56.5
Sopen11g026420 Solanum pennellii HOM05D007233 ORTHO05D009043 2.2e-38 162.5 138 56.5
Gohir.A13G223500 Gossypium hirsutum HOM05D007233 ORTHO05D009043 2.9e-38 162.2 136 64.0
Aqoxy1G01014 Aquilegia oxysepala HOM05D007233 ORTHO05D009043 6.5e-38 161.0 135 57.8
ATR0665G357 Amborella trichopoda HOM05D007233 ORTHO05D009043 1.1e-37 160.2 131 61.1
PGSC0003DMG400000464 Solanum tuberosum HOM05D007233 ORTHO05D009043 1.9e-37 159.5 138 55.1
AT1G08390 Arabidopsis thaliana HOM05D007233 ORTHO05D009043 2.5e-37 159.1 137 56.2
TPR.G32017 Trifolium pratense HOM05D007233 ORTHO05D009043 2.5e-37 159.1 137 62.8
SHI05395 Sapria himalayana HOM05D007233 ORTHO05D009043 3.2e-37 158.7 136 59.6
Medtr4g056300 Medicago truncatula HOM05D007233 ORTHO05D009043 4.2e-37 158.3 137 61.3
Duzib170G0414 Durio zibethinus HOM05D007233 ORTHO05D009043 5.5e-37 157.9 136 62.5
Dinv29405 Davidia involucrata HOM05D007233 ORTHO05D009043 7.2e-37 157.5 171 50.9
FvH4_3g30010 Fragaria vesca HOM05D007233 ORTHO05D009043 1.6e-36 156.4 137 55.5
FAN25G1956 Fragaria x ananassa HOM05D007233 ORTHO05D009043 3.6e-36 155.2 137 54.7
Eucgr.F03331 Eucalyptus grandis HOM05D007233 ORTHO05D009043 3.0e-35 152.1 144 55.6
FAN21G0394 Fragaria x ananassa HOM05D007233 ORTHO05D009043 5.2e-35 151.4 137 54.0
CAN.G644.46 Capsicum annuum HOM05D007233 ORTHO05D009043 6.8e-35 151.0 138 55.1
RcHm_v2.0_Chr5g0055931 Rosa chinensis HOM05D007233 ORTHO05D009043 3.4e-34 148.7 137 53.3
Ah.01g016160 Amaranthus hybridus HOM05D007233 ORTHO05D009043 1.3e-33 146.7 147 53.7
MBI04_g22192_MAGBIO Magnolia biondii HOM05D007233 ORTHO05D009043 1.6e-31 139.8 108 60.2
MD11G1153700 Malus domestica HOM05D007233 ORTHO05D009043 3.5e-31 138.7 135 53.3
PSO063G0378 Papaver somniferum HOM05D007233 ORTHO05D009043 4.5e-31 138.3 136 52.2
PSO339G4613 Papaver somniferum HOM05D007233 ORTHO05D009043 4.5e-31 138.3 136 51.5
Atru.chr3.3421 Acer truncatum HOM05D007233 ORTHO05D009043 1.3e-30 136.7 96 65.6
Nn6g35132 Nelumbo nucifera HOM05D007233 ORTHO05D009043 5.4e-24 114.8 84 58.3
Cpa.g.sc47.40 Carica papaya HOM05D007233 ORTHO05D009043 2.0e-23 112.8 117 52.1
Pp3c26_4940 Physcomitrium patens HOM05D007233 ORTHO05D009043 2.0e-23 112.8 137 43.8
Pp3c26_4950 Physcomitrium patens HOM05D007233 ORTHO05D009043 2.0e-23 112.8 137 43.8
Gorai.013G259000 Gossypium raimondii HOM05D007233 ORTHO05D009043 1.0e-22 110.5 101 58.4
ClCG08G000500 Citrullus lanatus HOM05D007233 ORTHO05D009043 1.3e-22 110.2 102 55.9
Os03g0684300 Oryza sativa ssp. japonica HOM05D007233 ORTHO05D009043 1.7e-22 109.8 142 47.9
Zm00001eb053200 Zea mays HOM05D007233 ORTHO05D009043 2.3e-22 109.4 142 47.2
Psat0s3169g0040 Pisum sativum HOM05D007233 ORTHO05D009043 3.9e-22 108.6 94 61.7
TWI31G0123 Tripterygium wilfordii HOM05D007233 ORTHO05D009043 1.1e-21 107.1 123 48.8
Cfa010203 Carpinus fangiana HOM05D007233 ORTHO05D009043 1.5e-21 106.7 98 58.2
Cfa020420 Carpinus fangiana HOM05D007233 ORTHO05D009043 2.5e-21 105.9 95 55.8
Mapoly0016s0182 Marchantia polymorpha HOM05D007233 ORTHO05D009043 3.3e-21 105.5 137 42.3
arahy.Tifrunner.gnm1.ann1.9UEW9D Arachis hypogaea HOM05D007233 ORTHO05D009043 9.5e-21 104.0 123 44.7
Haze_23479 Corylus avellana HOM05D007233 ORTHO05D009043 4.0e-19 98.6 115 47.0
Sc12g0003860 Simmondsia chinensis HOM05D007233 ORTHO05D009043 2.0e-18 96.3 81 58.0
Haze_23491 Corylus avellana HOM05D007233 ORTHO05D009043 2.2e-17 92.8 99 51.5
AagrBONN_evm.TU.Sc2ySwM_344.3909 Anthoceros agrestis HOM05D007233 ORTHO05D009043 6.4e-17 91.3 108 43.5
Haze_23472 Corylus avellana HOM05D007233 ORTHO05D009043 1.9e-16 89.7 100 49.0
Oeu035529.3 Olea europaea HOM05D007233 ORTHO05D009043 4.3e-13 78.6 81 51.9
CDE02G1642 Ceratophyllum demersum HOM05D007233 ORTHO05D009043 5.6e-13 78.2 84 52.4
Haze_23488 Corylus avellana HOM05D007233 ORTHO05D009043 8.9e-11 70.9 81 48.1
Oeu000616.2 Olea europaea HOM05D007233 ORTHO05D009043 3.7e-09 65.5 72 48.6
arahy.Tifrunner.gnm1.ann1.3ZRX2Z Arachis hypogaea HOM05D007233 ORTHO05D009043 5.4e-08 61.6 67 44.8
Duzib168G0428 Durio zibethinus HOM05D007233 ORTHO05D009043 2.7e-07 59.3 105 39.0


User provided reference genes

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