Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0345281 Helianthus annuus HOM05D002824 ORTHO05D007162 1.8e-60 235.7 118 100.0
HanXRQChr00c0394g0574541 Helianthus annuus HOM05D002824 ORTHO05D007162 8.6e-55 216.9 118 94.9
HanXRQChr01g0020211 Helianthus annuus HOM05D002824 ORTHO05D007162 8.6e-55 216.9 118 94.9
HanXRQChr10g0284391 Helianthus annuus HOM05D002824 ORTHO05D007162 8.6e-55 216.9 118 94.9
HanXRQChr10g0318051 Helianthus annuus HOM05D002824 ORTHO05D007162 8.6e-55 216.9 118 94.9
HanXRQChr11g0326971 Helianthus annuus HOM05D002824 ORTHO05D007162 8.6e-55 216.9 118 94.9
HanXRQChr12g0369861 Helianthus annuus HOM05D002824 ORTHO05D007162 8.6e-55 216.9 118 94.9
HanXRQCPg0580191 Helianthus annuus HOM05D002824 ORTHO05D007162 8.6e-55 216.9 118 94.9
HanXRQChr17g0554561 Helianthus annuus HOM05D002824 ORTHO05D007162 3.6e-53 211.5 117 93.2
DCAR_032521 Daucus carota HOM05D002824 ORTHO05D007162 2.4e-49 198.7 118 83.9
CAN.G1595.2 Capsicum annuum HOM05D002824 ORTHO05D007162 3.2e-49 198.4 118 85.6
Solyc00g500031.1 Solanum lycopersicum HOM05D002824 ORTHO05D007162 3.2e-49 198.4 118 85.6
Solyc00g500076.1 Solanum lycopersicum HOM05D002824 ORTHO05D007162 3.2e-49 198.4 118 85.6
CAN.G327.20 Capsicum annuum HOM05D002824 ORTHO05D007162 1.6e-48 196.1 118 85.6
PGR111G0083 Punica granatum HOM05D002824 ORTHO05D007162 4.6e-48 194.5 118 83.9
Migut.D01328 Erythranthe guttata HOM05D002824 ORTHO05D007162 2.5e-46 188.7 118 82.2
CARHR282250 Cardamine hirsuta HOM05D002824 ORTHO05D007162 1.6e-45 186.0 118 78.8
ATCG00770 Arabidopsis thaliana HOM05D002824 ORTHO05D007162 2.1e-45 185.7 118 78.0
BNapus_Darmor_BZH_scaffold_253p00350 Brassica napus HOM05D002824 ORTHO05D007162 2.1e-45 185.7 118 78.0
RcHm_v2.0_CPg0501871 Rosa chinensis HOM05D002824 ORTHO05D007162 2.8e-45 185.3 118 79.7
BolSC29t60529H Brassica oleracea HOM05D002824 ORTHO05D007162 6.2e-45 184.1 118 77.1
BolSC29t60610H Brassica oleracea HOM05D002824 ORTHO05D007162 6.2e-45 184.1 118 77.1
BolSC35t60729H Brassica oleracea HOM05D002824 ORTHO05D007162 6.2e-45 184.1 118 77.1
BraSC103t45445Z Brassica rapa HOM05D002824 ORTHO05D007162 6.2e-45 184.1 118 77.1
BraSC138t45553Z Brassica rapa HOM05D002824 ORTHO05D007162 6.2e-45 184.1 118 77.1
ClCG00G003160 Citrullus lanatus HOM05D002824 ORTHO05D007162 6.2e-45 184.1 118 78.8
AL2G20560 Arabidopsis lyrata HOM05D002824 ORTHO05D007162 8.1e-45 183.7 118 77.1
AL2G21720 Arabidopsis lyrata HOM05D002824 ORTHO05D007162 8.1e-45 183.7 118 77.1
BNapus_Darmor_BZH_scaffold_287p00270 Brassica napus HOM05D002824 ORTHO05D007162 3.1e-44 181.8 118 76.3
BraSC58t46441Z Brassica rapa HOM05D002824 ORTHO05D007162 3.1e-44 181.8 118 76.3
C02p60170 Brassica napus HOM05D002824 ORTHO05D007162 6.8e-44 180.6 118 76.3
Gohir.1Z050134 Gossypium hirsutum HOM05D002824 ORTHO05D007162 6.8e-44 180.6 118 77.1
Gohir.D11G307000 Gossypium hirsutum HOM05D002824 ORTHO05D007162 6.8e-44 180.6 118 76.3
Lalb_Chr25g0283371 Lupinus albus HOM05D002824 ORTHO05D007162 8.9e-44 180.3 118 78.0
PSO548G0051 Papaver somniferum HOM05D002824 ORTHO05D007162 1.2e-43 179.9 118 79.7
TAR375G0295 Trochodendron aralioides HOM05D002824 ORTHO05D007162 2.0e-43 179.1 118 78.8
Cpa.g.sc0.196 Carica papaya HOM05D002824 ORTHO05D007162 2.6e-43 178.7 113 81.4
Peaxi162Scf00299g00114 Petunia axillaris HOM05D002824 ORTHO05D007162 3.4e-43 178.3 108 85.2
Gohir.A12G024800 Gossypium hirsutum HOM05D002824 ORTHO05D007162 4.4e-43 177.9 118 76.3
Gohir.A05G396400 Gossypium hirsutum HOM05D002824 ORTHO05D007162 5.8e-43 177.6 114 76.3
Lalb_Chr03g0039321 Lupinus albus HOM05D002824 ORTHO05D007162 7.5e-43 177.2 118 77.1
Gohir.A06G056900 Gossypium hirsutum HOM05D002824 ORTHO05D007162 9.8e-43 176.8 118 75.4
Nn021s41522 Nelumbo nucifera HOM05D002824 ORTHO05D007162 9.8e-43 176.8 118 78.0
HanXRQChr00c0925g0577901 Helianthus annuus HOM05D002824 ORTHO05D007162 2.2e-42 175.6 96 95.8
Lsat_1_v5_gn_1_116300 Lactuca sativa HOM05D002824 ORTHO05D007162 4.9e-42 174.5 114 82.5
Medtr4g059910 Medicago truncatula HOM05D002824 ORTHO05D007162 9.2e-41 170.2 104 78.8
Hund04057 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.3e-39 166.4 112 79.5
Hund08802 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.3e-39 166.4 112 79.5
Hund12527 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.3e-39 166.4 112 79.5
Hund19320 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.3e-39 166.4 112 79.5
Hund27962 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.3e-39 166.4 112 79.5
Hund27985 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.3e-39 166.4 112 79.5
Hund28109 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.3e-39 166.4 112 79.5
Hund28268 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.3e-39 166.4 112 79.5
Hund28459 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.3e-39 166.4 112 79.5
Hund28519 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.3e-39 166.4 112 79.5
Hund28529 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.3e-39 166.4 112 79.5
Hund28632 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.3e-39 166.4 112 79.5
Hund28678 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.3e-39 166.4 112 79.5
Hund28746 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.3e-39 166.4 112 79.5
Hund28759 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.3e-39 166.4 112 79.5
Hund28778 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.3e-39 166.4 112 79.5
Hund28846 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.3e-39 166.4 112 79.5
Hund29022 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.3e-39 166.4 112 79.5
Hund29036 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.3e-39 166.4 112 79.5
Hund29164 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.3e-39 166.4 112 79.5
Hund29217 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.3e-39 166.4 112 79.5
Hund29505 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.3e-39 166.4 112 79.5
Hund29525 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.3e-39 166.4 112 79.5
Hund29537 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.3e-39 166.4 112 79.5
Hund29554 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.3e-39 166.4 112 79.5
Hund29593 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.3e-39 166.4 112 79.5
Hund29605 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.3e-39 166.4 112 79.5
Hund29612 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.3e-39 166.4 112 79.5
Hund29682 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.3e-39 166.4 112 79.5
Hund30031 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.3e-39 166.4 112 79.5
Hund30272 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.3e-39 166.4 112 79.5
Hund30490 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.3e-39 166.4 112 79.5
Hund30495 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.3e-39 166.4 112 79.5
Hund30544 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.3e-39 166.4 112 79.5
Hund31501 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.3e-39 166.4 112 79.5
Lalb_Chr23g0274241 Lupinus albus HOM05D002824 ORTHO05D007162 2.5e-38 162.2 116 72.4
Medtr4g034810 Medicago truncatula HOM05D002824 ORTHO05D007162 4.3e-38 161.4 109 75.2
Hund27578 Selenicereus undatus HOM05D002824 ORTHO05D007162 4.3e-38 161.4 110 79.1
BraA06t25384Z Brassica rapa HOM05D002824 ORTHO05D007162 7.3e-38 160.6 117 70.1
LjContig00319g0012184 Lotus japonicus HOM05D000964 ORTHO05D004047 9.5e-38 160.2 116 69.8
LjContig00319g0026138 Lotus japonicus HOM05D000964 ORTHO05D004047 9.5e-38 160.2 116 69.8
Gohir.D01G102138 Gossypium hirsutum HOM05D002824 ORTHO05D007162 2.6e-35 152.1 103 74.8
LjContig00318g0002732 Lotus japonicus HOM05D002824 ORTHO05D007162 4.4e-35 151.4 118 66.9
BolC9t57548H Brassica oleracea HOM05D002824 ORTHO05D007162 9.9e-35 150.2 100 75.0
Eucgr.E03558 Eucalyptus grandis HOM05D002824 ORTHO05D007162 1.7e-34 149.4 93 81.7
Gohir.A12G228400 Gossypium hirsutum HOM05D002824 ORTHO05D007162 6.4e-34 147.5 91 81.3
Gorai.003G111500 Gossypium raimondii HOM05D002824 ORTHO05D007162 1.4e-33 146.4 103 73.8
Hund29957 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.6e-32 142.9 98 78.6
Gohir.D03G105400 Gossypium hirsutum HOM05D002824 ORTHO05D007162 2.7e-32 142.1 103 70.9
Gorai.005G065900 Gossypium raimondii HOM05D002824 ORTHO05D007162 1.1e-30 136.7 99 69.7
Nitab4.5_0011882g0040 Nicotiana tabacum HOM05D002824 ORTHO05D007162 5.6e-30 134.4 82 82.9
SEGI_33981 Sequoiadendron giganteum HOM05D002824 ORTHO05D007162 1.4e-28 129.8 118 55.1
GSVIVG01014320001 Vitis vinifera HOM05D002824 ORTHO05D007162 1.7e-26 122.9 76 82.9
EL10As15g24111 Beta vulgaris HOM05D002824 ORTHO05D007162 3.5e-24 115.2 93 62.4
BolC7t41708H Brassica oleracea HOM05D002824 ORTHO05D007162 8.7e-23 110.5 77 72.7
Nitab4.5_0020737g0030 Nicotiana tabacum HOM05D002824 ORTHO05D007162 2.8e-21 105.5 79 72.2
Nitab4.5_0000173g0110 Nicotiana tabacum HOM05D002824 ORTHO05D007162 8.1e-21 104.0 68 79.4
Phvul.001G158000 Phaseolus vulgaris HOM05D002824 ORTHO05D007162 4.0e-20 101.7 80 63.8
Gohir.D08G194656 Gossypium hirsutum HOM05D002824 ORTHO05D007162 6.9e-20 100.9 118 50.0
Thhalv10027382m.g Eutrema salsugineum HOM05D002824 ORTHO05D007162 7.6e-19 97.4 70 70.0
Hund30069 Selenicereus undatus HOM05D002824 ORTHO05D008771 1.3e-18 96.7 63 81.0
Gohir.D08G062280 Gossypium hirsutum HOM05D002824 ORTHO05D007162 4.9e-18 94.7 118 48.3
SMO086G0055 Selaginella moellendorffii HOM05D002824 ORTHO05D007162 6.4e-18 94.4 115 44.3
C09p46990 Brassica napus HOM05D002824 ORTHO05D007162 3.2e-17 92.0 65 70.8
MBI05_g05353_MAGBIO Magnolia biondii HOM05D002824 ORTHO05D007162 3.3e-14 82.0 60 70.0
Medtr3g035490 Medicago truncatula HOM05D001133 ORTHO05D000941 5.6e-14 81.3 52 76.9
arahy.Tifrunner.gnm1.ann1.BAD1H7 Arachis hypogaea HOM05D002824 ORTHO05D007162 2.8e-13 79.0 73 60.3
Gorai.013G136400 Gossypium raimondii HOM05D002824 ORTHO05D007162 6.2e-13 77.8 53 71.7
HanXRQChr00c0593g0576371 Helianthus annuus HOM05D002824 ORTHO05D007162 1.1e-12 77.0 41 95.1
HanXRQChr04g0127481 Helianthus annuus HOM05D002824 ORTHO05D007162 1.1e-12 77.0 41 95.1
HanXRQChr11g0321101 Helianthus annuus HOM05D002824 ORTHO05D007162 1.1e-12 77.0 41 95.1
Lalb_Chr20g0114531 Lupinus albus HOM05D002824 ORTHO05D007162 2.0e-11 72.8 53 69.8
Hund08020 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.0e-11 72.8 78 52.6
Gohir.D13G121750 Gossypium hirsutum HOM05D002824 ORTHO05D007162 5.8e-11 71.2 53 69.8
MELO3C027652.2 Cucumis melo HOM05D002824 ORTHO05D007162 7.1e-09 64.3 43 72.1
arahy.Tifrunner.gnm1.ann1.TW2HF4 Arachis hypogaea HOM05D000216 ORTHO05D000634 7.9e-08 60.8 51 66.7
Nitab4.5_0000173g0100 Nicotiana tabacum HOM05D000964 ORTHO05D001488 7.9e-08 60.8 41 73.2
MELO3C026355.2 Cucumis melo HOM05D002824 ORTHO05D007162 1.3e-07 60.1 41 70.7
BolSC56t61248H Brassica oleracea HOM05D002824 ORTHO05D007162 1.8e-07 59.7 41 70.7
BraSC59t46570Z Brassica rapa HOM05D002824 ORTHO05D007162 1.8e-07 59.7 41 70.7
Gohir.A08G063166 Gossypium hirsutum HOM05D002824 ORTHO05D007162 6.7e-07 57.8 41 65.9
SGA_v2.0_scaffold208G41997 Striga asiatica HOM05D002824 ORTHO05D007162 6.7e-07 57.8 41 70.7
BolSC49t61163H Brassica oleracea HOM05D002824 ORTHO05D007162 9.6e-06 53.9 36 72.2


User provided reference genes

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