Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0344831 Helianthus annuus HOM05D006098 ORTHO05D007470 5.1e-66 254.2 123 100.0
HanXRQChr11g0344761 Helianthus annuus HOM05D006098 ORTHO05D007470 9.3e-36 153.7 78 93.6
ECA246G0847 Erigeron canadensis HOM05D006098 ORTHO05D007470 4.5e-30 134.8 78 83.3
HanXRQChr05g0158621 Helianthus annuus HOM05D006098 ORTHO05D007470 4.9e-29 131.3 79 84.8
HanXRQChr17g0537231 Helianthus annuus HOM05D006098 ORTHO05D007470 4.9e-29 131.3 79 84.8
Lsat_1_v5_gn_3_19721 Lactuca sativa HOM05D006098 ORTHO05D007470 6.5e-29 131.0 78 82.1
Actinidia32783 Actinidia chinensis HOM05D006098 ORTHO05D007470 9.3e-28 127.1 78 79.5
Nn7g37397 Nelumbo nucifera HOM05D006098 ORTHO05D007470 9.3e-28 127.1 78 78.2
Dinv41811 Davidia involucrata HOM05D006098 ORTHO05D007470 2.1e-27 125.9 78 79.5
Nn1g09368 Nelumbo nucifera HOM05D006098 ORTHO05D007470 1.0e-26 123.6 78 76.9
Actinidia01257 Actinidia chinensis HOM05D006098 ORTHO05D007470 1.3e-26 123.2 78 76.9
CSS0030969 Camellia sinensis var. sinensis HOM05D006098 ORTHO05D007470 1.8e-26 122.9 78 75.6
Cpa.g.sc71.63 Carica papaya HOM05D006098 ORTHO05D007470 3.0e-26 122.1 78 76.9
Duzib205G1615 Durio zibethinus HOM05D006098 ORTHO05D007470 3.0e-26 122.1 78 75.6
Gohir.A08G150000 Gossypium hirsutum HOM05D006098 ORTHO05D007470 3.0e-26 122.1 78 75.6
Thecc.03G318000 Theobroma cacao HOM05D006098 ORTHO05D007470 3.0e-26 122.1 78 75.6
DCAR_028369 Daucus carota HOM05D006098 ORTHO05D007470 2.5e-25 119.0 78 73.1
Gorai.004G178500 Gossypium raimondii HOM05D006098 ORTHO05D007470 4.3e-25 118.2 78 73.1
HanXRQChr03g0081041 Helianthus annuus HOM05D006098 ORTHO05D007470 4.3e-25 118.2 78 76.9
Potri.003G033300 Populus trichocarpa HOM05D006098 ORTHO05D007470 4.3e-25 118.2 78 73.1
EL10Ac5g12579 Beta vulgaris HOM05D006098 ORTHO05D007470 5.7e-25 117.9 78 73.1
Gohir.D12G205100 Gossypium hirsutum HOM05D006098 ORTHO05D007470 5.7e-25 117.9 78 73.1
ECA240G1264 Erigeron canadensis HOM05D006098 ORTHO05D007470 7.4e-25 117.5 78 75.6
Gorai.008G220000 Gossypium raimondii HOM05D006098 ORTHO05D007470 7.4e-25 117.5 78 73.1
HanXRQChr13g0411151 Helianthus annuus HOM05D006098 ORTHO05D007470 7.4e-25 117.5 78 75.6
MBI15_g33454_MAGBIO Magnolia biondii HOM05D006098 ORTHO05D007470 7.4e-25 117.5 78 73.1
Rhsim11G0034900 Rhododendron simsii HOM05D006098 ORTHO05D007470 9.7e-25 117.1 78 74.4
GSVIVG01036872001 Vitis vinifera HOM05D006098 ORTHO05D007470 1.3e-24 116.7 78 74.4
Atru.chr8.2640 Acer truncatum HOM05D006098 ORTHO05D007470 1.6e-24 116.3 78 70.5
Actinidia14735 Actinidia chinensis HOM05D006098 ORTHO05D007470 1.6e-24 116.3 78 74.4
FvH4_2g37220 Fragaria vesca HOM05D006098 ORTHO05D007470 1.6e-24 116.3 78 73.1
FAN20G1855 Fragaria x ananassa HOM05D006098 ORTHO05D007470 1.6e-24 116.3 78 73.1
FAN27G2650 Fragaria x ananassa HOM05D006098 ORTHO05D007470 1.6e-24 116.3 78 73.1
Nitab4.5_0011712g0010 Nicotiana tabacum HOM05D006098 ORTHO05D007470 2.2e-24 115.9 78 71.8
Rhsim11G0035500 Rhododendron simsii HOM05D006098 ORTHO05D007470 2.2e-24 115.9 78 74.4
Gohir.A12G202400 Gossypium hirsutum HOM05D006098 ORTHO05D007470 2.8e-24 115.5 78 71.8
Ah.12g058500 Amaranthus hybridus HOM05D006098 ORTHO05D007470 3.7e-24 115.2 78 71.8
Peaxi162Scf00045g00071 Petunia axillaris HOM05D006098 ORTHO05D007470 3.7e-24 115.2 78 70.5
Actinidia18166 Actinidia chinensis HOM05D006098 ORTHO05D007470 4.8e-24 114.8 78 73.1
Potri.001G193400 Populus trichocarpa HOM05D006098 ORTHO05D007470 4.8e-24 114.8 78 73.1
RcHm_v2.0_Chr6g0304491 Rosa chinensis HOM05D006098 ORTHO05D007470 4.8e-24 114.8 78 71.8
Sabra01G0135500 Salix brachista HOM05D006098 ORTHO05D007470 4.8e-24 114.8 82 72.0
AUR62030416 Chenopodium quinoa HOM05D006098 ORTHO05D007470 6.3e-24 114.4 78 70.5
Lj8A337G13 Lonicera japonica HOM05D006098 ORTHO05D007470 6.3e-24 114.4 78 73.1
FAN15G0890 Fragaria x ananassa HOM05D006098 ORTHO05D007470 8.2e-24 114.0 78 71.8
COL.COLO4_10360 Corchorus olitorius HOM05D006098 ORTHO05D007470 1.1e-23 113.6 78 70.5
AUR62010477 Chenopodium quinoa HOM05D006098 ORTHO05D007470 1.4e-23 113.2 78 69.2
Solyc08g075520.4 Solanum lycopersicum HOM05D006098 ORTHO05D007470 1.4e-23 113.2 78 73.1
CAN.G884.14 Capsicum annuum HOM05D006098 ORTHO05D007470 1.8e-23 112.8 77 71.4
Oeu057164.1 Olea europaea HOM05D006098 ORTHO05D007470 1.8e-23 112.8 78 69.2
TAR629G3250 Trochodendron aralioides HOM05D006098 ORTHO05D007470 1.8e-23 112.8 78 74.4
CAN.G1026.8 Capsicum annuum HOM05D006098 ORTHO05D007470 3.1e-23 112.1 78 71.8
SalBow8G2199 Salvia bowleyana HOM05D006098 ORTHO05D007470 3.1e-23 112.1 78 70.5
PGSC0003DMG400018483 Solanum tuberosum HOM05D006098 ORTHO05D007470 3.1e-23 112.1 77 70.1
CAN.G884.9 Capsicum annuum HOM05D006098 ORTHO05D007470 4.1e-23 111.7 78 69.2
Lsat_1_v5_gn_5_57121 Lactuca sativa HOM05D006098 ORTHO05D007470 4.1e-23 111.7 78 74.4
Oeu042191.1 Olea europaea HOM05D006098 ORTHO05D007470 5.3e-23 111.3 78 67.9
Oeu042192.1 Olea europaea HOM05D006098 ORTHO05D007470 5.3e-23 111.3 78 67.9
Eucgr.D02551 Eucalyptus grandis HOM05D006098 ORTHO05D007470 6.9e-23 110.9 78 69.2
Sopen08g001580 Solanum pennellii HOM05D006098 ORTHO05D007470 9.0e-23 110.5 77 68.8
Migut.A00537 Erythranthe guttata HOM05D006098 ORTHO05D007470 1.5e-22 109.8 78 70.5
Nitab4.5_0000985g0060 Nicotiana tabacum HOM05D006098 ORTHO05D007470 1.5e-22 109.8 78 70.5
Oeu046790.1 Olea europaea HOM05D006098 ORTHO05D007470 1.5e-22 109.8 78 67.9
vmacro00080 Vaccinium macrocarpon HOM05D006098 ORTHO05D007470 1.5e-22 109.8 78 69.2
Duzib068G0239 Durio zibethinus HOM05D006098 ORTHO05D007470 2.0e-22 109.4 78 69.2
Peaxi162Scf00053g00062 Petunia axillaris HOM05D006098 ORTHO05D007470 2.6e-22 109.0 78 70.5
Solyc08g005560.3 Solanum lycopersicum HOM05D006098 ORTHO05D007470 3.4e-22 108.6 77 67.5
Manes.15G184300 Manihot esculenta HOM05D006098 ORTHO05D007470 7.6e-22 107.5 78 65.4
THA.LOC104811082 Tarenaya hassleriana HOM05D006098 ORTHO05D007470 1.0e-21 107.1 78 69.2
CDE01G0744 Ceratophyllum demersum HOM05D006098 ORTHO05D007470 1.3e-21 106.7 78 67.9
Nitab4.5_0000030g0370 Nicotiana tabacum HOM05D006098 ORTHO05D007470 1.7e-21 106.3 79 72.2
Nitab4.5_0000898g0120 Nicotiana tabacum HOM05D006098 ORTHO05D007470 1.7e-21 106.3 79 72.2
Cc08_g05440 Coffea canephora HOM05D006098 ORTHO05D007470 2.9e-21 105.5 77 67.5
PGR031G3371 Punica granatum HOM05D006098 ORTHO05D007470 3.8e-21 105.1 78 69.2
SEGI_14227 Sequoiadendron giganteum HOM05D006098 ORTHO05D007470 3.8e-21 105.1 78 64.1
SGA_v2.0_scaffold111G31352 Striga asiatica HOM05D006098 ORTHO05D007470 3.8e-21 105.1 78 64.1
PSO541G2197 Papaver somniferum HOM05D006098 ORTHO05D007470 5.0e-21 104.8 78 65.4
Peaxi162Scf00876g00435 Petunia axillaris HOM05D006098 ORTHO05D007470 5.0e-21 104.8 79 65.8
SalBow4G1396 Salvia bowleyana HOM05D006098 ORTHO05D007470 5.0e-21 104.8 78 64.1
MSTRG.1762 Avicennia marina HOM05D006098 ORTHO05D007470 1.1e-20 103.6 78 69.2
PSO675G7908 Papaver somniferum HOM05D006098 ORTHO05D007470 1.4e-20 103.2 78 65.4
ATR0568G039 Amborella trichopoda HOM05D006098 ORTHO05D007470 2.5e-20 102.4 79 68.4
Dinv37422 Davidia involucrata HOM05D006098 ORTHO05D007470 1.6e-19 99.8 64 76.6
Nitab4.5_0001175g0140 Nicotiana tabacum HOM05D006098 ORTHO05D007470 1.6e-19 99.8 104 52.9
AL7G34930 Arabidopsis lyrata HOM05D006098 ORTHO05D007470 4.6e-19 98.2 78 65.4
AT4G19160 Arabidopsis thaliana HOM05D006098 ORTHO05D007470 4.6e-19 98.2 78 65.4
Carub.0007s2199 Capsella rubella HOM05D006098 ORTHO05D007470 6.1e-19 97.8 78 65.4
unitig_37.g12121 Utricularia gibba HOM05D006098 ORTHO05D007470 3.9e-18 95.1 78 64.1
Aa31LG6G1850 Aethionema arabicum HOM05D006098 ORTHO05D007470 2.5e-17 92.4 78 61.5
CARHR226030 Cardamine hirsuta HOM05D006098 ORTHO05D007470 4.3e-17 91.7 78 62.8
Sp7g17860 Schrenkiella parvula HOM05D006098 ORTHO05D007470 3.1e-15 85.5 78 59.0
Sabra03G0019100 Salix brachista HOM05D006098 ORTHO05D007470 9.1e-15 84.0 46 87.0
BcaNung04007 Brassica carinata HOM05D006098 ORTHO05D007470 2.0e-14 82.8 78 57.7
BcaC09g51434 Brassica carinata HOM05D006098 ORTHO05D007470 2.6e-14 82.4 78 56.4
Thhalv10025127m.g Eutrema salsugineum HOM05D006098 ORTHO05D007470 4.5e-14 81.6 57 70.2
BcaC01g00601 Brassica carinata HOM05D006098 ORTHO05D007470 7.7e-14 80.9 79 53.2
A01p11120 Brassica napus HOM05D006098 ORTHO05D007470 1.3e-13 80.1 82 58.5
C01p13160 Brassica napus HOM05D006098 ORTHO05D007470 1.3e-13 80.1 79 57.0
BolC1t01289H Brassica oleracea HOM05D006098 ORTHO05D007470 1.3e-13 80.1 79 57.0
BraA01t01058Z Brassica rapa HOM05D006098 ORTHO05D007470 1.3e-13 80.1 82 58.5
Rhsim11G0035700 Rhododendron simsii HOM05D006098 ORTHO05D007470 1.7e-13 79.7 46 84.8
C03p81800 Brassica napus HOM05D006098 ORTHO05D007470 3.8e-13 78.6 80 55.0
BolC3t20457H Brassica oleracea HOM05D006098 ORTHO05D007470 3.8e-13 78.6 80 55.0
A08p14200 Brassica napus HOM05D006098 ORTHO05D007470 6.5e-13 77.8 80 55.0
BraA08t33414Z Brassica rapa HOM05D006098 ORTHO05D007470 6.5e-13 77.8 80 55.0
BcaB04g18531 Brassica carinata HOM05D006098 ORTHO05D007470 8.5e-13 77.4 78 52.6
Oeu042198.1 Olea europaea HOM05D006098 ORTHO05D007470 1.9e-12 76.3 59 61.0
AagrBONN_evm.TU.Sc2ySwM_368.631 Anthoceros agrestis HOM05D006098 ORTHO05D007470 4.2e-12 75.1 77 49.4
SMO364G0549 Selaginella moellendorffii HOM05D006098 ORTHO05D007470 9.4e-12 73.9 58 62.1
Pp3c12_14620 Physcomitrium patens HOM05D006098 ORTHO05D007470 2.1e-11 72.8 54 61.1


User provided reference genes

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