Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0344761 Helianthus annuus HOM05D006098 ORTHO05D007470 2.3e-75 285.4 136 100.0
HanXRQChr05g0158621 Helianthus annuus HOM05D006098 ORTHO05D007470 1.8e-56 222.6 162 73.5
HanXRQChr17g0537231 Helianthus annuus HOM05D006098 ORTHO05D007470 1.8e-56 222.6 162 73.5
ECA246G0847 Erigeron canadensis HOM05D006098 ORTHO05D007470 5.2e-56 221.1 161 71.4
Lsat_1_v5_gn_3_19721 Lactuca sativa HOM05D006098 ORTHO05D007470 1.3e-54 216.5 161 70.8
Actinidia32783 Actinidia chinensis HOM05D006098 ORTHO05D007470 1.3e-49 199.9 131 77.1
Dinv41811 Davidia involucrata HOM05D006098 ORTHO05D007470 1.3e-49 199.9 160 67.5
Nn7g37397 Nelumbo nucifera HOM05D006098 ORTHO05D007470 8.1e-49 197.2 124 79.8
CSS0030969 Camellia sinensis var. sinensis HOM05D006098 ORTHO05D007470 1.1e-48 196.8 131 75.6
ECA240G1264 Erigeron canadensis HOM05D006098 ORTHO05D007470 1.4e-48 196.4 160 65.6
Actinidia01257 Actinidia chinensis HOM05D006098 ORTHO05D007470 9.0e-48 193.7 126 77.0
Cpa.g.sc71.63 Carica papaya HOM05D006098 ORTHO05D007470 9.0e-48 193.7 126 77.8
Thecc.03G318000 Theobroma cacao HOM05D006098 ORTHO05D007470 9.0e-48 193.7 161 65.2
HanXRQChr13g0411151 Helianthus annuus HOM05D006098 ORTHO05D007470 1.2e-47 193.4 160 65.6
Nn1g09368 Nelumbo nucifera HOM05D006098 ORTHO05D007470 1.5e-47 193.0 124 77.4
Duzib205G1615 Durio zibethinus HOM05D006098 ORTHO05D007470 4.5e-47 191.4 126 77.0
Gohir.D12G205100 Gossypium hirsutum HOM05D006098 ORTHO05D007470 4.5e-47 191.4 161 64.6
Gorai.008G220000 Gossypium raimondii HOM05D006098 ORTHO05D007470 5.8e-47 191.0 161 64.6
HanXRQChr03g0081041 Helianthus annuus HOM05D006098 ORTHO05D007470 7.6e-47 190.7 125 77.6
Rhsim11G0034900 Rhododendron simsii HOM05D006098 ORTHO05D007470 7.6e-47 190.7 131 74.8
Gohir.A12G202400 Gossypium hirsutum HOM05D006098 ORTHO05D007470 2.2e-46 189.1 161 64.0
Actinidia14735 Actinidia chinensis HOM05D006098 ORTHO05D007470 2.9e-46 188.7 125 77.6
Actinidia18166 Actinidia chinensis HOM05D006098 ORTHO05D007470 2.9e-46 188.7 125 77.6
DCAR_028369 Daucus carota HOM05D006098 ORTHO05D007470 2.9e-46 188.7 158 63.3
GSVIVG01036872001 Vitis vinifera HOM05D006098 ORTHO05D007470 4.9e-46 188.0 160 63.8
Gohir.A08G150000 Gossypium hirsutum HOM05D006098 ORTHO05D007470 8.4e-46 187.2 126 74.6
EL10Ac5g12579 Beta vulgaris HOM05D006098 ORTHO05D007470 1.1e-45 186.8 126 73.8
Potri.003G033300 Populus trichocarpa HOM05D006098 ORTHO05D007470 1.4e-45 186.4 160 63.8
Atru.chr8.2640 Acer truncatum HOM05D006098 ORTHO05D007470 2.4e-45 185.7 161 61.5
Lsat_1_v5_gn_5_57121 Lactuca sativa HOM05D006098 ORTHO05D007470 2.4e-45 185.7 125 77.6
COL.COLO4_10360 Corchorus olitorius HOM05D006098 ORTHO05D007470 3.2e-45 185.3 161 62.7
Lj8A337G13 Lonicera japonica HOM05D006098 ORTHO05D007470 3.2e-45 185.3 125 76.0
Rhsim11G0035500 Rhododendron simsii HOM05D006098 ORTHO05D007470 3.2e-45 185.3 131 73.3
Solyc08g075520.4 Solanum lycopersicum HOM05D006098 ORTHO05D007470 3.2e-45 185.3 125 74.4
Nitab4.5_0011712g0010 Nicotiana tabacum HOM05D006098 ORTHO05D007470 7.1e-45 184.1 125 72.8
Oeu057164.1 Olea europaea HOM05D006098 ORTHO05D007470 9.3e-45 183.7 160 61.9
Peaxi162Scf00045g00071 Petunia axillaris HOM05D006098 ORTHO05D007470 9.3e-45 183.7 125 72.8
CAN.G1026.8 Capsicum annuum HOM05D006098 ORTHO05D007470 1.2e-44 183.3 125 72.8
PGSC0003DMG400018483 Solanum tuberosum HOM05D006098 ORTHO05D007470 1.2e-44 183.3 126 71.4
Ah.12g058500 Amaranthus hybridus HOM05D006098 ORTHO05D007470 1.6e-44 183.0 126 73.0
AUR62030416 Chenopodium quinoa HOM05D006098 ORTHO05D007470 1.6e-44 183.0 126 71.4
MBI15_g33454_MAGBIO Magnolia biondii HOM05D006098 ORTHO05D007470 1.6e-44 183.0 124 74.2
Oeu042191.1 Olea europaea HOM05D006098 ORTHO05D007470 1.6e-44 183.0 160 60.6
Oeu042192.1 Olea europaea HOM05D006098 ORTHO05D007470 1.6e-44 183.0 160 60.6
CAN.G884.9 Capsicum annuum HOM05D006098 ORTHO05D007470 2.1e-44 182.6 126 71.4
FvH4_2g37220 Fragaria vesca HOM05D006098 ORTHO05D007470 2.1e-44 182.6 125 73.6
FAN20G1855 Fragaria x ananassa HOM05D006098 ORTHO05D007470 2.1e-44 182.6 125 73.6
FAN27G2650 Fragaria x ananassa HOM05D006098 ORTHO05D007470 2.1e-44 182.6 125 73.6
Oeu046790.1 Olea europaea HOM05D006098 ORTHO05D007470 2.1e-44 182.6 126 71.4
Sopen08g001580 Solanum pennellii HOM05D006098 ORTHO05D007470 2.1e-44 182.6 126 70.6
CAN.G884.14 Capsicum annuum HOM05D006098 ORTHO05D007470 3.5e-44 181.8 126 71.4
AUR62010477 Chenopodium quinoa HOM05D006098 ORTHO05D007470 3.5e-44 181.8 126 70.6
TAR629G3250 Trochodendron aralioides HOM05D006098 ORTHO05D007470 4.6e-44 181.4 124 75.8
vmacro00080 Vaccinium macrocarpon HOM05D006098 ORTHO05D007470 4.6e-44 181.4 131 71.0
Potri.001G193400 Populus trichocarpa HOM05D006098 ORTHO05D007470 6.0e-44 181.0 160 63.1
RcHm_v2.0_Chr6g0304491 Rosa chinensis HOM05D006098 ORTHO05D007470 6.0e-44 181.0 125 72.8
Sabra01G0135500 Salix brachista HOM05D006098 ORTHO05D007470 6.0e-44 181.0 164 62.8
FAN15G0890 Fragaria x ananassa HOM05D006098 ORTHO05D007470 1.0e-43 180.3 125 72.8
Gorai.004G178500 Gossypium raimondii HOM05D006098 ORTHO05D007470 1.0e-43 180.3 126 72.2
Nitab4.5_0000985g0060 Nicotiana tabacum HOM05D006098 ORTHO05D007470 1.0e-43 180.3 125 72.0
Peaxi162Scf00053g00062 Petunia axillaris HOM05D006098 ORTHO05D007470 2.3e-43 179.1 125 72.0
Nitab4.5_0000030g0370 Nicotiana tabacum HOM05D006098 ORTHO05D007470 3.0e-43 178.7 126 73.8
Solyc08g005560.3 Solanum lycopersicum HOM05D006098 ORTHO05D007470 8.7e-43 177.2 126 69.0
THA.LOC104811082 Tarenaya hassleriana HOM05D006098 ORTHO05D007470 8.7e-43 177.2 126 72.2
Nitab4.5_0000898g0120 Nicotiana tabacum HOM05D006098 ORTHO05D007470 1.5e-42 176.4 126 73.0
Cc08_g05440 Coffea canephora HOM05D006098 ORTHO05D007470 1.9e-42 176.0 158 59.5
Migut.A00537 Erythranthe guttata HOM05D006098 ORTHO05D007470 4.3e-42 174.9 125 71.2
Peaxi162Scf00876g00435 Petunia axillaris HOM05D006098 ORTHO05D007470 4.3e-42 174.9 126 70.6
SalBow4G1396 Salvia bowleyana HOM05D006098 ORTHO05D007470 7.4e-42 174.1 160 58.1
Duzib068G0239 Durio zibethinus HOM05D006098 ORTHO05D007470 9.6e-42 173.7 126 72.2
SGA_v2.0_scaffold111G31352 Striga asiatica HOM05D006098 ORTHO05D007470 9.6e-42 173.7 125 68.8
Manes.15G184300 Manihot esculenta HOM05D006098 ORTHO05D007470 1.3e-41 173.3 125 69.6
PGR031G3371 Punica granatum HOM05D006098 ORTHO05D007470 2.1e-41 172.6 125 72.0
MSTRG.1762 Avicennia marina HOM05D006098 ORTHO05D007470 2.8e-41 172.2 124 71.8
Nitab4.5_0001175g0140 Nicotiana tabacum HOM05D006098 ORTHO05D007470 5.3e-40 167.9 151 59.6
CDE01G0744 Ceratophyllum demersum HOM05D006098 ORTHO05D007470 6.9e-40 167.5 124 70.2
PSO541G2197 Papaver somniferum HOM05D006098 ORTHO05D007470 1.2e-39 166.8 124 67.7
PSO675G7908 Papaver somniferum HOM05D006098 ORTHO05D007470 3.4e-39 165.2 124 67.7
AT4G19160 Arabidopsis thaliana HOM05D006098 ORTHO05D007470 1.3e-38 163.3 125 68.0
AL7G34930 Arabidopsis lyrata HOM05D006098 ORTHO05D007470 1.7e-38 162.9 125 68.8
Dinv37422 Davidia involucrata HOM05D006098 ORTHO05D007470 2.2e-38 162.5 107 77.6
ATR0568G039 Amborella trichopoda HOM05D006098 ORTHO05D007470 2.9e-38 162.2 125 68.8
Carub.0007s2199 Capsella rubella HOM05D006098 ORTHO05D007470 6.4e-38 161.0 125 68.0
Aa31LG6G1850 Aethionema arabicum HOM05D006098 ORTHO05D007470 3.2e-37 158.7 126 65.9
unitig_37.g12121 Utricularia gibba HOM05D006098 ORTHO05D007470 1.6e-36 156.4 125 66.4
SEGI_14227 Sequoiadendron giganteum HOM05D006098 ORTHO05D007470 6.0e-36 154.5 124 62.1
HanXRQChr11g0344831 Helianthus annuus HOM05D006098 ORTHO05D007470 7.9e-36 154.1 78 93.6
CARHR226030 Cardamine hirsuta HOM05D006098 ORTHO05D007470 5.1e-35 151.4 126 65.1
SalBow8G2199 Salvia bowleyana HOM05D006098 ORTHO05D007470 1.1e-34 150.2 132 59.8
Sp7g17860 Schrenkiella parvula HOM05D006098 ORTHO05D007470 5.6e-34 147.9 132 61.4
Sabra03G0019100 Salix brachista HOM05D006098 ORTHO05D007470 2.8e-33 145.6 218 44.0
BcaNung04007 Brassica carinata HOM05D006098 ORTHO05D007470 6.9e-32 141.0 124 62.1
BcaC09g51434 Brassica carinata HOM05D006098 ORTHO05D007470 9.0e-32 140.6 124 61.3
Thhalv10025127m.g Eutrema salsugineum HOM05D006098 ORTHO05D007470 9.0e-32 140.6 124 62.9
A01p11120 Brassica napus HOM05D006098 ORTHO05D007470 3.4e-31 138.7 128 62.5
BraA01t01058Z Brassica rapa HOM05D006098 ORTHO05D007470 3.4e-31 138.7 128 62.5
C01p13160 Brassica napus HOM05D006098 ORTHO05D007470 4.5e-31 138.3 125 61.6
BolC1t01289H Brassica oleracea HOM05D006098 ORTHO05D007470 4.5e-31 138.3 125 61.6
BcaC01g00601 Brassica carinata HOM05D006098 ORTHO05D007470 4.9e-30 134.8 132 56.8
C03p81800 Brassica napus HOM05D006098 ORTHO05D007470 3.2e-29 132.1 123 60.2
BolC3t20457H Brassica oleracea HOM05D006098 ORTHO05D007470 3.2e-29 132.1 123 60.2
A08p14200 Brassica napus HOM05D006098 ORTHO05D007470 1.2e-28 130.2 133 57.1
BraA08t33414Z Brassica rapa HOM05D006098 ORTHO05D007470 1.2e-28 130.2 133 57.1
BcaB04g18531 Brassica carinata HOM05D006098 ORTHO05D007470 1.0e-27 127.1 122 57.4
Eucgr.D02551 Eucalyptus grandis HOM05D006098 ORTHO05D007470 7.4e-26 120.9 82 72.0
Oeu042198.1 Olea europaea HOM05D006098 ORTHO05D007470 9.0e-24 114.0 104 59.6
AagrBONN_evm.TU.Sc2ySwM_368.631 Anthoceros agrestis HOM05D006098 ORTHO05D007470 1.5e-23 113.2 122 48.4
HanXRQChr09g0271561 Helianthus annuus HOM05D006098 ORTHO05D007470 1.1e-21 107.1 61 83.6
Sopen08g024170 Solanum pennellii HOM05D006098 ORTHO05D007470 3.0e-19 99.0 80 62.5
PGSC0003DMG400016110 Solanum tuberosum HOM05D006098 ORTHO05D007470 3.0e-19 99.0 80 62.5
Pp3c12_14620 Physcomitrium patens HOM05D006098 ORTHO05D007470 3.9e-19 98.6 112 45.5
CAN.G947.35 Capsicum annuum HOM05D006098 ORTHO05D007470 1.9e-18 96.3 125 48.8
SMO364G0549 Selaginella moellendorffii HOM05D006098 ORTHO05D007470 7.4e-18 94.4 111 45.9
Manes.17G016300 Manihot esculenta HOM05D006098 ORTHO05D007470 1.3e-17 93.6 76 64.5
Rhsim11G0035700 Rhododendron simsii HOM05D006098 ORTHO05D007470 4.8e-17 91.7 54 81.5
FvH4_2g37180 Fragaria vesca HOM05D006098 ORTHO05D007470 1.8e-16 89.7 77 63.6
RcHm_v2.0_Chr4g0402301 Rosa chinensis HOM05D006098 ORTHO05D007470 3.2e-13 79.0 81 54.3
Gohir.D08G171101 Gossypium hirsutum HOM05D006098 ORTHO05D007470 2.3e-11 72.8 69 59.4
Prupe.1G352900 Prunus persica HOM05D006098 ORTHO05D007470 2.2e-09 66.2 46 71.7
Peaxi162Scf00527g00718 Petunia axillaris HOM05D006098 ORTHO05D007470 4.8e-09 65.1 50 64.0


User provided reference genes

Program Settings