Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0344611 Helianthus annuus HOM05D002759 ORTHO05D003290 5.7e-95 350.9 177 100.0
HanXRQChr10g0290421 Helianthus annuus HOM05D002759 ORTHO05D003290 8.7e-19 97.8 153 39.2
Lsat_1_v5_gn_5_109460 Lactuca sativa HOM05D002759 ORTHO05D003290 1.9e-18 96.7 183 32.8
Dinv24260 Davidia involucrata HOM05D002759 ORTHO05D003290 7.6e-15 84.7 196 33.2
ECA234G1843 Erigeron canadensis HOM05D002759 ORTHO05D003290 3.5e-12 75.9 118 39.0
CSS0015736 Camellia sinensis var. sinensis HOM05D002759 ORTHO05D003290 3.9e-11 72.4 148 37.2
Haze_21022 Corylus avellana HOM05D002759 ORTHO05D003290 3.3e-10 69.3 132 36.4
Atru.chr6.1027 Acer truncatum HOM05D002759 ORTHO05D003290 4.3e-10 68.9 121 35.5
Atru.chr6.1078 Acer truncatum HOM05D002759 ORTHO05D003290 5.7e-10 68.6 121 35.5
Thecc.02G041500 Theobroma cacao HOM05D002759 ORTHO05D003290 7.4e-10 68.2 221 29.4
GSVIVG01023021001 Vitis vinifera HOM05D002759 ORTHO05D003290 9.7e-10 67.8 205 28.8
AL7G30550 Arabidopsis lyrata HOM05D002759 ORTHO05D003290 1.3e-09 67.4 131 39.7
AT4G22970 Arabidopsis thaliana HOM05D002759 ORTHO05D003290 1.6e-09 67.0 131 39.7
Sp7g21060 Schrenkiella parvula HOM05D002759 ORTHO05D003290 2.8e-09 66.2 131 38.9
TWI59G0497 Tripterygium wilfordii HOM05D002759 ORTHO05D003290 2.8e-09 66.2 121 34.7
Actinidia39057 Actinidia chinensis HOM05D002759 ORTHO05D003290 3.7e-09 65.9 125 35.2
Cfa017189 Carpinus fangiana HOM05D002759 ORTHO05D003290 3.7e-09 65.9 137 35.8
Phvul.006G212401 Phaseolus vulgaris HOM05D002759 ORTHO05D003290 3.7e-09 65.9 121 36.4
arahy.Tifrunner.gnm1.ann1.YVTC7U Arachis hypogaea HOM05D002759 ORTHO05D003290 4.8e-09 65.5 146 32.2
Prupe.1G563000 Prunus persica HOM05D002759 ORTHO05D003290 6.3e-09 65.1 131 36.6
arahy.Tifrunner.gnm1.ann1.VDG0KY Arachis hypogaea HOM05D002759 ORTHO05D003290 1.1e-08 64.3 146 31.5
Ciclev10000008m.g Citrus clementina HOM05D002759 ORTHO05D003290 1.8e-08 63.5 123 35.0
Lj9C311G18 Lonicera japonica HOM05D002759 ORTHO05D003290 2.4e-08 63.2 165 32.1
BcaNung01007 Brassica carinata HOM05D002759 ORTHO05D003290 3.1e-08 62.8 132 37.9
ClCG08G010020 Citrullus lanatus HOM05D002759 ORTHO05D003290 4.1e-08 62.4 121 34.7
Sc19g0000800 Simmondsia chinensis HOM05D002759 ORTHO05D003290 4.1e-08 62.4 134 34.3
THA.LOC104814230 Tarenaya hassleriana HOM05D002759 ORTHO05D003290 4.1e-08 62.4 132 35.6
CAN.G1352.21 Capsicum annuum HOM05D002759 ORTHO05D003290 5.3e-08 62.0 160 31.2
Manes.07G013200 Manihot esculenta HOM05D002759 ORTHO05D003290 5.3e-08 62.0 119 33.6
Sopen01g046990 Solanum pennellii HOM05D002759 ORTHO05D003290 5.3e-08 62.0 189 29.6
Oeu008876.1 Olea europaea HOM05D002759 ORTHO05D003290 6.9e-08 61.6 183 28.4
Nitab4.5_0004005g0050 Nicotiana tabacum HOM05D002759 ORTHO05D003290 9.0e-08 61.2 173 30.6
Potri.003G021700 Populus trichocarpa HOM05D002759 ORTHO05D003290 9.0e-08 61.2 142 33.1
Rhsim11G0131800 Rhododendron simsii HOM05D002759 ORTHO05D003290 9.0e-08 61.2 132 34.8
Solyc01g104490.3 Solanum lycopersicum HOM05D002759 ORTHO05D003290 1.2e-07 60.8 189 29.1
Lalb_Chr20g0123401 Lupinus albus HOM05D002759 ORTHO05D003290 1.5e-07 60.5 147 32.7
BraA01t01371Z Brassica rapa HOM05D002759 ORTHO05D003290 2.0e-07 60.1 134 38.1
Nitab4.5_0005539g0020 Nicotiana tabacum HOM05D002759 ORTHO05D003290 2.0e-07 60.1 173 30.6
Carub.0007s1830 Capsella rubella HOM05D002759 ORTHO05D003290 2.6e-07 59.7 133 36.8
Aa31LG6G5020 Aethionema arabicum HOM05D002759 ORTHO05D003290 3.4e-07 59.3 131 37.4
CiPaw.05G042600 Carya illinoinensis HOM05D002759 ORTHO05D003290 3.4e-07 59.3 150 30.0
Lj6g0007416 Lotus japonicus HOM05D002759 ORTHO05D003290 3.4e-07 59.3 121 32.2
Peaxi162Scf00011g00138 Petunia axillaris HOM05D002759 ORTHO05D003290 3.4e-07 59.3 172 30.8
BcaC09g51048 Brassica carinata HOM05D002759 ORTHO05D003290 5.9e-07 58.5 134 37.3
COL.COLO4_08439 Corchorus olitorius HOM05D002759 ORTHO05D003290 5.9e-07 58.5 131 34.4
Lj1g0017629 Lotus japonicus HOM05D002759 ORTHO05D003290 7.7e-07 58.2 121 32.2
C07p52320 Brassica napus HOM05D002759 ORTHO05D003290 1.0e-06 57.8 142 36.6
BolC1t01691H Brassica oleracea HOM05D002759 ORTHO05D003290 1.0e-06 57.8 134 37.3
Thhalv10029518m.g Eutrema salsugineum HOM05D002759 ORTHO05D003290 1.3e-06 57.4 115 36.5
A01p14240 Brassica napus HOM05D002759 ORTHO05D003290 1.7e-06 57.0 134 37.3
A03p53910 Brassica napus HOM05D002759 ORTHO05D003290 1.7e-06 57.0 139 34.5
BraA03t14460Z Brassica rapa HOM05D002759 ORTHO05D003290 1.7e-06 57.0 140 34.3
BolC7t45725H Brassica oleracea HOM05D002759 ORTHO05D003290 2.2e-06 56.6 142 36.6
Thhalv10024187m.g Eutrema salsugineum HOM05D002759 ORTHO05D003290 2.2e-06 56.6 134 38.1
Hund11642 Selenicereus undatus HOM05D002759 ORTHO05D003290 2.2e-06 56.6 125 35.2
Aqoxy3G00692 Aquilegia oxysepala HOM05D002759 ORTHO05D003290 5.0e-06 55.5 126 33.3
CANSAT11G0811 Cannabis sativa HOM05D002759 ORTHO05D003290 5.0e-06 55.5 122 33.6
Glyma.15G048100 Glycine max HOM05D002759 ORTHO05D003290 5.0e-06 55.5 121 32.2
QL02p098685 Quercus lobata HOM05D002759 ORTHO05D003290 5.0e-06 55.5 134 35.1
MELO3C011463.2 Cucumis melo HOM05D002759 ORTHO05D003290 6.5e-06 55.1 145 33.1
C01p17510 Brassica napus HOM05D002759 ORTHO05D003290 8.5e-06 54.7 134 38.1


User provided reference genes

Program Settings