Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0343701 Helianthus annuus HOM05D006244 ORTHO05D007401 3.4e-161 571.6 293 100.0
ECA248G0275 Erigeron canadensis HOM05D006244 ORTHO05D007401 1.3e-123 446.8 305 73.4
Lsat_1_v5_gn_1_77900 Lactuca sativa HOM05D006244 ORTHO05D007401 3.8e-120 435.3 290 74.8
Hma1.2p1_0324F.1_g125510 Hydrangea macrophylla HOM05D006244 ORTHO05D007401 5.2e-101 371.7 293 62.5
Dinv22748 Davidia involucrata HOM05D006244 ORTHO05D007401 3.7e-99 365.5 294 63.3
TAR636G2962 Trochodendron aralioides HOM05D006244 ORTHO05D007401 7.7e-97 357.8 306 59.5
QL10p050150 Quercus lobata HOM05D006244 ORTHO05D007401 5.0e-96 355.1 305 58.4
CSS0032343 Camellia sinensis var. sinensis HOM05D006244 ORTHO05D007401 8.6e-96 354.4 307 58.3
QL05p011148 Quercus lobata HOM05D006244 ORTHO05D007401 1.5e-95 353.6 305 57.7
Manes.04G043800 Manihot esculenta HOM05D006244 ORTHO05D007401 9.5e-95 350.9 307 58.6
Actinidia11297 Actinidia chinensis HOM05D006244 ORTHO05D007401 1.2e-94 350.5 300 58.3
Cfa020094 Carpinus fangiana HOM05D006244 ORTHO05D007401 3.6e-94 349.0 307 59.6
CiPaw.02G053900 Carya illinoinensis HOM05D006244 ORTHO05D007401 1.0e-93 347.4 306 59.8
Atru.chr4.1240 Acer truncatum HOM05D006244 ORTHO05D007401 1.8e-93 346.7 294 60.5
MELO3C009823.2 Cucumis melo HOM05D006244 ORTHO05D007401 3.0e-93 345.9 304 58.2
Ciclev10021382m.g Citrus clementina HOM05D006244 ORTHO05D007401 1.5e-92 343.6 300 58.3
Gorai.011G141500 Gossypium raimondii HOM05D006244 ORTHO05D007401 2.8e-91 339.3 305 56.7
CsaV3_3G040880 Cucumis sativus L. HOM05D006244 ORTHO05D007401 1.4e-90 337.0 305 56.7
Duzib175G0007 Durio zibethinus HOM05D006244 ORTHO05D007401 1.4e-90 337.0 305 57.0
Potri.017G028900 Populus trichocarpa HOM05D006244 ORTHO05D007401 1.8e-90 336.7 301 56.5
Gohir.D10G128300 Gossypium hirsutum HOM05D006244 ORTHO05D007401 3.1e-90 335.9 305 56.1
Sp5g03670 Schrenkiella parvula HOM05D006244 ORTHO05D007401 4.1e-90 335.5 294 57.5
AT3G59490 Arabidopsis thaliana HOM05D006244 ORTHO05D007401 5.4e-90 335.1 294 57.1
Sc19g0002910 Simmondsia chinensis HOM05D006244 ORTHO05D007401 9.2e-90 334.3 306 54.6
Duzib151G0743 Durio zibethinus HOM05D006244 ORTHO05D007401 1.2e-89 334.0 305 56.7
Hund03170 Selenicereus undatus HOM05D006244 ORTHO05D007401 1.6e-89 333.6 302 55.0
CANSAT78G1025 Cannabis sativa HOM05D006244 ORTHO05D007401 2.7e-89 332.8 305 56.1
Rhsim09G0025200 Rhododendron simsii HOM05D006244 ORTHO05D007401 3.5e-89 332.4 363 48.2
Cpa.g.sc9.298 Carica papaya HOM05D006244 ORTHO05D007401 4.5e-89 332.0 304 56.2
PSO732G0675 Papaver somniferum HOM05D006244 ORTHO05D007401 1.3e-88 330.5 305 54.4
Sabra17G0017500 Salix brachista HOM05D006244 ORTHO05D007401 1.3e-88 330.5 301 56.5
THA.LOC104803749 Tarenaya hassleriana HOM05D006244 ORTHO05D007401 1.3e-88 330.5 312 55.4
RcHm_v2.0_Chr4g0406631 Rosa chinensis HOM05D006244 ORTHO05D007401 1.7e-88 330.1 304 55.3
Thhalv10006132m.g Eutrema salsugineum HOM05D006244 ORTHO05D007401 2.9e-88 329.3 294 56.8
Carub.0005s2622 Capsella rubella HOM05D006244 ORTHO05D007401 3.9e-88 328.9 293 56.3
ClCG10G015550 Citrullus lanatus HOM05D006244 ORTHO05D007401 3.9e-88 328.9 303 55.1
Gohir.A10G138500 Gossypium hirsutum HOM05D006244 ORTHO05D007401 3.9e-88 328.9 305 55.1
Sopen11g020640 Solanum pennellii HOM05D006244 ORTHO05D007401 3.9e-88 328.9 309 55.0
MD04G1042500 Malus domestica HOM05D006244 ORTHO05D007401 5.0e-88 328.6 303 57.4
Cc07_g21300 Coffea canephora HOM05D006244 ORTHO05D007401 6.6e-88 328.2 299 55.5
PSO675G8539 Papaver somniferum HOM05D006244 ORTHO05D007401 6.6e-88 328.2 315 53.7
PGSC0003DMG400022864 Solanum tuberosum HOM05D006244 ORTHO05D007401 6.6e-88 328.2 308 55.2
Lj3g0008901 Lotus japonicus HOM05D006244 ORTHO05D007401 8.6e-88 327.8 304 53.3
A04p02170 Brassica napus HOM05D006244 ORTHO05D007401 1.1e-87 327.4 294 56.8
SalBow3G2237 Salvia bowleyana HOM05D006244 ORTHO05D007401 1.1e-87 327.4 304 54.9
COL.COLO4_12977 Corchorus olitorius HOM05D006244 ORTHO05D007401 1.5e-87 327.0 329 52.9
Solyc11g045210.2 Solanum lycopersicum HOM05D006244 ORTHO05D007401 1.9e-87 326.6 309 54.0
Aqoxy2G04144 Aquilegia oxysepala HOM05D006244 ORTHO05D007401 3.3e-87 325.9 289 57.4
GSVIVG01010791001 Vitis vinifera HOM05D006244 ORTHO05D007401 3.3e-87 325.9 301 56.5
FAN07G2433 Fragaria x ananassa HOM05D006244 ORTHO05D007401 4.3e-87 325.5 304 54.6
Nitab4.5_0004117g0020 Nicotiana tabacum HOM05D006244 ORTHO05D007401 4.3e-87 325.5 306 55.2
BcaC07g40479 Brassica carinata HOM05D006244 ORTHO05D007401 5.6e-87 325.1 293 57.7
Lalb_Chr22g0352091 Lupinus albus HOM05D006244 ORTHO05D007401 5.6e-87 325.1 301 54.2
Nitab4.5_0008822g0040 Nicotiana tabacum HOM05D006244 ORTHO05D007401 5.6e-87 325.1 306 55.6
MSTRG.9759 Avicennia marina HOM05D006244 ORTHO05D007401 7.3e-87 324.7 302 55.0
EL10Ac3g05981 Beta vulgaris HOM05D006244 ORTHO05D007401 1.2e-86 323.9 307 53.4
Migut.G01000 Erythranthe guttata HOM05D006244 ORTHO05D007401 1.2e-86 323.9 301 55.1
AL5G41400 Arabidopsis lyrata HOM05D006244 ORTHO05D007401 2.1e-86 323.2 294 56.1
TPR.G18836 Trifolium pratense HOM05D006244 ORTHO05D007401 2.1e-86 323.2 296 53.7
BraA04t15944Z Brassica rapa HOM05D006244 ORTHO05D007401 2.8e-86 322.8 293 56.3
CAN.G31.8 Capsicum annuum HOM05D006244 ORTHO05D007401 2.8e-86 322.8 308 53.6
C08p34500 Brassica napus HOM05D006244 ORTHO05D007401 3.6e-86 322.4 294 56.5
BolC8t51051H Brassica oleracea HOM05D006244 ORTHO05D007401 3.6e-86 322.4 294 56.5
BcaNung05942 Brassica carinata HOM05D006244 ORTHO05D007401 1.0e-85 320.9 282 58.5
A09p51770 Brassica napus HOM05D006244 ORTHO05D007401 1.0e-85 320.9 293 56.3
Psat5g289400 Pisum sativum HOM05D006244 ORTHO05D007401 1.4e-85 320.5 296 54.1
Aa31LG10G13810 Aethionema arabicum HOM05D006244 ORTHO05D007401 2.3e-85 319.7 294 55.4
Peaxi162Scf00126g00623 Petunia axillaris HOM05D006244 ORTHO05D007401 6.8e-85 318.2 308 53.6
BcaB02g08221 Brassica carinata HOM05D006244 ORTHO05D007401 8.9e-85 317.8 294 55.8
CARHR169870 Cardamine hirsuta HOM05D006244 ORTHO05D007401 8.9e-85 317.8 294 54.4
AUR62023861 Chenopodium quinoa HOM05D006244 ORTHO05D007401 1.2e-84 317.4 303 52.1
Prupe.1G196900 Prunus persica HOM05D006244 ORTHO05D007401 2.0e-84 316.6 305 55.7
FvH4_4g10850 Fragaria vesca HOM05D006244 ORTHO05D007401 5.8e-84 315.1 296 54.4
FAN12G2117 Fragaria x ananassa HOM05D006244 ORTHO05D007401 5.8e-84 315.1 296 54.4
Medtr2g098960 Medicago truncatula HOM05D006244 ORTHO05D007401 5.8e-84 315.1 296 52.7
unitig_0.g2404 Utricularia gibba HOM05D006244 ORTHO05D007401 5.8e-84 315.1 293 53.6
BcaC07g40478 Brassica carinata HOM05D006244 ORTHO05D007401 1.7e-83 313.5 293 55.6
Eucgr.H00368 Eucalyptus grandis HOM05D006244 ORTHO05D007401 1.7e-83 313.5 311 52.7
Thecc.04G177000 Theobroma cacao HOM05D006244 ORTHO05D007401 3.7e-83 312.4 305 53.8
arahy.Tifrunner.gnm1.ann1.LPC3IP Arachis hypogaea HOM05D006244 ORTHO05D007401 8.3e-83 311.2 310 52.3
BraA09t40612Z Brassica rapa HOM05D006244 ORTHO05D007401 7.0e-82 308.1 290 54.5
TWI38G0370 Tripterygium wilfordii HOM05D006244 ORTHO05D007401 3.5e-81 305.8 297 52.5
Ah.07g202200 Amaranthus hybridus HOM05D006244 ORTHO05D007401 6.0e-81 305.1 302 52.0
Glyma.15G029700 Glycine max HOM05D006244 ORTHO05D007401 1.0e-80 304.3 301 51.2
arahy.Tifrunner.gnm1.ann1.IE55HN Arachis hypogaea HOM05D006244 ORTHO05D007401 3.3e-79 299.3 299 51.8
AUR62002326 Chenopodium quinoa HOM05D006244 ORTHO05D007401 8.0e-78 294.7 303 49.8
PGR142G0422 Punica granatum HOM05D006244 ORTHO05D007401 8.0e-78 294.7 306 50.0
MBI08_g33169_MAGBIO Magnolia biondii HOM05D006244 ORTHO05D007401 1.1e-77 294.3 277 55.6
BolC4t24903H Brassica oleracea HOM05D006244 ORTHO05D007401 1.1e-74 284.3 294 52.4
HPP92_001264 Vanilla planifolia HOM05D006244 ORTHO05D007401 9.2e-74 281.2 315 46.7
HPP92_001248 Vanilla planifolia HOM05D006244 ORTHO05D007401 2.1e-73 280.0 315 46.3
ATR0743G009 Amborella trichopoda HOM05D006244 ORTHO05D007401 1.1e-71 274.2 289 47.8
Nn3g18564 Nelumbo nucifera HOM05D006244 ORTHO05D007401 8.1e-70 268.1 305 47.5
VMungo1080G0762 Vigna mungo HOM05D006244 ORTHO05D007401 4.0e-69 265.8 261 50.6
DCAR_028445 Daucus carota HOM05D006244 ORTHO05D007401 2.5e-63 246.5 268 47.8
C04p33420 Brassica napus HOM05D006244 ORTHO05D007401 8.9e-61 238.0 294 49.0
Phvul.005G153400 Phaseolus vulgaris HOM05D006244 ORTHO05D007401 8.9e-61 238.0 307 43.0
Actinidia27645 Actinidia chinensis HOM05D006244 ORTHO05D007401 1.7e-59 233.8 210 57.1
Lju337A6T20 Lonicera japonica HOM05D006244 ORTHO05D007401 2.9e-59 233.0 264 49.6
Sed0026513 Sechium edule HOM05D006244 ORTHO05D007401 7.1e-58 228.4 234 51.3
vmacro00644 Vaccinium macrocarpon HOM05D006244 ORTHO05D007401 6.2e-54 215.3 201 56.2
FAN17G1708 Fragaria x ananassa HOM05D006244 ORTHO05D007401 5.1e-48 195.7 199 52.8
Zm00001eb318410 Zea mays HOM05D006244 ORTHO05D007401 1.0e-40 171.4 253 37.9
Cfa015178 Carpinus fangiana HOM05D006244 ORTHO05D007401 6.7e-40 168.7 171 54.4
vmacro00645 Vaccinium macrocarpon HOM05D006244 ORTHO05D007401 2.6e-36 156.8 105 65.7
MBI08_g09972_MAGBIO Magnolia biondii HOM05D006244 ORTHO05D007401 7.6e-36 155.2 193 46.6
C04p32460 Brassica napus HOM05D006244 ORTHO05D007401 1.1e-34 151.4 205 41.5
Pp3c9_3600 Physcomitrium patens HOM05D006244 ORTHO05D007401 2.6e-28 130.2 308 28.6
Psat5g289440 Pisum sativum HOM05D006244 ORTHO05D007401 5.0e-27 125.9 121 53.7
BcaC02g10138 Brassica carinata HOM05D006244 ORTHO05D007401 2.5e-23 113.6 237 37.1
Os09g0515300 Oryza sativa ssp. japonica HOM05D006244 ORTHO05D007401 3.3e-23 113.2 120 48.3
Lj6A77G23 Lonicera japonica HOM05D006244 ORTHO05D007401 6.3e-22 109.0 95 60.0
SMO364G0376 Selaginella moellendorffii HOM05D006244 ORTHO05D007401 1.4e-21 107.8 282 27.3
Lju337A6G22 Lonicera japonica HOM05D006244 ORTHO05D007401 2.0e-20 104.0 68 70.6
Lj6C77T3 Lonicera japonica HOM05D006244 ORTHO05D007401 4.5e-20 102.8 67 71.6
Peaxi162Scf01193g00009 Petunia axillaris HOM05D006244 ORTHO05D007401 1.1e-18 98.2 131 42.0
Peaxi162Scf00533g00611 Petunia axillaris HOM05D006244 ORTHO05D007401 1.4e-18 97.8 131 42.7
Sabra17G0062000 Salix brachista HOM05D006244 ORTHO05D007401 1.6e-17 94.4 120 46.7
Peaxi162Scf00066g02019 Petunia axillaris HOM05D006244 ORTHO05D007401 2.7e-17 93.6 131 41.2
Peaxi162Scf00272g00041 Petunia axillaris HOM05D006244 ORTHO05D007401 2.8e-14 83.6 120 40.8
Peaxi162Scf00627g00001 Petunia axillaris HOM05D006244 ORTHO05D007401 1.4e-13 81.3 120 40.0
Peaxi162Scf00404g00815 Petunia axillaris HOM05D006244 ORTHO05D007401 4.1e-13 79.7 134 38.8
Glyma.13G344600 Glycine max HOM05D006244 ORTHO05D007401 3.4e-12 76.6 68 51.5
Zm00001eb239190 Zea mays HOM05D001072 ORTHO05D007401 4.5e-12 76.3 64 50.0
AagrBONN_evm.TU.Sc2ySwM_228.3866 Anthoceros agrestis HOM05D006244 ORTHO05D007401 7.4e-07 58.9 101 33.7
Peaxi162Scf00255g00049 Petunia axillaris HOM05D006244 ORTHO05D007401 6.3e-06 55.8 85 38.8


User provided reference genes

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