Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0343631 Helianthus annuus HOM05D007372 ORTHO05D009318 2.8e-64 248.4 122 100.0
Lsat_1_v5_gn_9_42440 Lactuca sativa HOM05D007372 ORTHO05D009318 1.2e-35 153.3 124 66.1
Dinv02471 Davidia involucrata HOM05D007372 ORTHO05D009318 4.6e-19 98.2 123 50.4
ECA232G4628 Erigeron canadensis HOM05D007372 ORTHO05D009318 1.1e-17 93.6 120 50.8
Nitab4.5_0007403g0010 Nicotiana tabacum HOM05D007372 ORTHO05D009318 1.9e-17 92.8 122 48.4
Sabra02G0050700 Salix brachista HOM05D007372 ORTHO05D009318 5.6e-17 91.3 121 43.0
Sopen04g028150 Solanum pennellii HOM05D007372 ORTHO05D009318 5.6e-17 91.3 120 44.2
Solyc04g072040.1 Solanum lycopersicum HOM05D007372 ORTHO05D009318 9.6e-17 90.5 120 44.2
Oeu046069.1 Olea europaea HOM05D007372 ORTHO05D009318 1.3e-16 90.1 128 47.7
Migut.C00154 Erythranthe guttata HOM05D007372 ORTHO05D009318 3.1e-15 85.5 126 45.2
Potri.002G062800 Populus trichocarpa HOM05D007372 ORTHO05D009318 5.3e-15 84.7 122 43.4
CAN.G1183.23 Capsicum annuum HOM05D007372 ORTHO05D009318 5.8e-14 81.3 121 43.8
Gohir.D02G067900 Gossypium hirsutum HOM05D007372 ORTHO05D009318 6.4e-13 77.8 123 41.5
TAR381G1194 Trochodendron aralioides HOM05D007372 ORTHO05D009318 1.1e-12 77.0 118 39.8
COL.COLO4_24577 Corchorus olitorius HOM05D007372 ORTHO05D009318 1.9e-12 76.3 119 40.3
Gorai.005G076700 Gossypium raimondii HOM05D007372 ORTHO05D009318 1.9e-12 76.3 123 40.7
Nn5g28866 Nelumbo nucifera HOM05D007372 ORTHO05D009318 1.9e-12 76.3 116 42.2
Gohir.A02G062200 Gossypium hirsutum HOM05D007372 ORTHO05D009318 2.4e-12 75.9 123 40.7
vmacro22649 Vaccinium macrocarpon HOM05D007372 ORTHO05D009318 2.4e-12 75.9 120 43.3
Cc10_g06440 Coffea canephora HOM05D007372 ORTHO05D009318 3.2e-12 75.5 108 47.2
vmacro22532 Vaccinium macrocarpon HOM05D007372 ORTHO05D009318 5.4e-12 74.7 120 43.3
Aqoxy6G00438 Aquilegia oxysepala HOM05D007372 ORTHO05D009318 1.2e-11 73.6 136 39.7
Cfa018264 Carpinus fangiana HOM05D007372 ORTHO05D009318 1.2e-11 73.6 125 40.8
unitig_46.g18009 Utricularia gibba HOM05D007372 ORTHO05D009318 2.1e-11 72.8 96 49.0
PSO675G2246 Papaver somniferum HOM05D007372 ORTHO05D009318 2.7e-11 72.4 95 46.3
SalBow7G3614 Salvia bowleyana HOM05D007372 ORTHO05D009318 2.7e-11 72.4 134 40.3
Sed0016879 Sechium edule HOM05D007372 ORTHO05D009318 2.7e-11 72.4 118 38.1
PSO541G3596 Papaver somniferum HOM05D007372 ORTHO05D009318 6.0e-11 71.2 98 45.9
Rhsim06G0093000 Rhododendron simsii HOM05D007372 ORTHO05D009318 7.9e-11 70.9 95 53.7
Haze_17824 Corylus avellana HOM05D007372 ORTHO05D009318 1.0e-10 70.5 130 40.0
Aa31LG4G8880 Aethionema arabicum HOM05D007372 ORTHO05D009318 3.9e-10 68.6 130 34.6
PGSC0003DMG400025053 Solanum tuberosum HOM05D007372 ORTHO05D009318 3.9e-10 68.6 108 40.7
CiPaw.15G011400 Carya illinoinensis HOM05D007372 ORTHO05D009318 5.1e-10 68.2 133 36.8
MD05G1035800 Malus domestica HOM05D007372 ORTHO05D009318 5.1e-10 68.2 125 37.6
PGR042G0625 Punica granatum HOM05D007372 ORTHO05D009318 1.9e-09 66.2 130 36.9
QL02p037053 Quercus lobata HOM05D007372 ORTHO05D009318 3.3e-09 65.5 129 40.3
Eucgr.F02675 Eucalyptus grandis HOM05D007372 ORTHO05D009318 5.6e-09 64.7 124 39.5
Duzib093G1977 Durio zibethinus HOM05D007372 ORTHO05D009318 9.6e-09 63.9 157 35.0
Manes.02G185100 Manihot esculenta HOM05D007372 ORTHO05D009318 9.6e-09 63.9 125 40.8
THA.LOC104809747 Tarenaya hassleriana HOM05D007372 ORTHO05D009318 9.6e-09 63.9 122 36.9
Actinidia17763 Actinidia chinensis HOM05D007372 ORTHO05D009318 3.7e-08 62.0 116 37.9
Lj2g0008181 Lotus japonicus HOM05D007372 ORTHO05D009318 6.2e-08 61.2 125 35.2
Psat0ss32450g0040 Pisum sativum HOM05D007372 ORTHO05D009318 8.1e-08 60.8 115 41.7
CANSAT25G1084 Cannabis sativa HOM05D007372 ORTHO05D009318 1.1e-07 60.5 127 39.4
ClCG08G007220 Citrullus lanatus HOM05D007372 ORTHO05D009318 1.1e-07 60.5 132 34.8
MELO3C019965.2 Cucumis melo HOM05D007372 ORTHO05D009318 1.4e-07 60.1 123 39.0
TWI60G0690 Tripterygium wilfordii HOM05D007372 ORTHO05D009318 1.4e-07 60.1 121 36.4
Ah.05g168260 Amaranthus hybridus HOM05D007372 ORTHO05D009318 1.8e-07 59.7 135 33.3
Cpa.g.sc26.120 Carica papaya HOM05D007372 ORTHO05D009318 3.1e-07 58.9 124 37.1
Sc26g0002770 Simmondsia chinensis HOM05D007372 ORTHO05D009318 3.1e-07 58.9 123 35.0
SGA_v2.0_scaffold82G26208 Striga asiatica HOM05D007372 ORTHO05D009318 4.0e-07 58.5 121 38.0
arahy.Tifrunner.gnm1.ann1.1F4W04 Arachis hypogaea HOM05D007372 ORTHO05D009318 5.3e-07 58.2 126 35.7
arahy.Tifrunner.gnm1.ann1.CL5RXG Arachis hypogaea HOM05D007372 ORTHO05D009318 5.3e-07 58.2 126 35.7
C06p45810 Brassica napus HOM05D007372 ORTHO05D009318 5.3e-07 58.2 124 37.9
QL02p036533 Quercus lobata HOM05D007372 ORTHO05D009318 5.3e-07 58.2 125 36.0
EL10Ac1g01626 Beta vulgaris HOM05D007372 ORTHO05D009318 9.0e-07 57.4 130 36.2
A07p37910 Brassica napus HOM05D007372 ORTHO05D009318 1.2e-06 57.0 103 39.8
Hund17499 Selenicereus undatus HOM05D007372 ORTHO05D009318 1.2e-06 57.0 131 33.6
GSVIVG01013700001 Vitis vinifera HOM05D007372 ORTHO05D009318 1.2e-06 57.0 114 36.8
AT1G71760 Arabidopsis thaliana HOM05D007372 ORTHO05D009318 1.5e-06 56.6 134 32.8
BcaC08g46602 Brassica carinata HOM05D007372 ORTHO05D009318 1.5e-06 56.6 122 37.7
BolC6t39633H Brassica oleracea HOM05D007372 ORTHO05D009318 1.5e-06 56.6 124 37.9
Carub.0002s1852 Capsella rubella HOM05D007372 ORTHO05D009318 1.5e-06 56.6 131 35.9
Ca_04659_v3 Cicer arietinum L. HOM05D007372 ORTHO05D009318 1.5e-06 56.6 115 34.8
AUR62034913 Chenopodium quinoa HOM05D007372 ORTHO05D009318 2.0e-06 56.2 124 36.3
Peaxi162Scf00360g00916 Petunia axillaris HOM05D007372 ORTHO05D009318 2.0e-06 56.2 121 37.2
CsaV3_6G004890 Cucumis sativus L. HOM05D007372 ORTHO05D009318 5.8e-06 54.7 115 40.0
ATR1120G103 Amborella trichopoda HOM05D007372 ORTHO05D009318 7.6e-06 54.3 121 34.7


User provided reference genes

Program Settings