Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0343441 Helianthus annuus HOM05D011323 ORTHO05D010674 0.0e+00 2324.7 1937 100.0
ECA247G3667 Erigeron canadensis HOM05D011323 ORTHO05D010674 1.7e-75 289.7 921 34.0
Lsat_1_v5_gn_1_4921 Lactuca sativa HOM05D011323 ORTHO05D010674 9.1e-53 214.2 1594 27.4
DCAR_001148 Daucus carota HOM05D033900 ORTHO05D010674 4.4e-15 89.0 87 51.7
Cc10_g15040 Coffea canephora HOM05D011323 ORTHO05D010674 5.8e-15 88.6 195 38.5
Lj4C698G20 Lonicera japonica HOM05D011323 ORTHO05D010674 5.8e-15 88.6 516 26.6
Nn1g06053 Nelumbo nucifera HOM05D011323 ORTHO05D010674 2.9e-14 86.3 198 33.3
AUR62040588 Chenopodium quinoa HOM05D018884 ORTHO05D010674 6.4e-14 85.1 92 46.7
Sopen04g027650 Solanum pennellii HOM05D011323 ORTHO05D010674 8.4e-14 84.7 219 33.8
Solyc04g071660.3 Solanum lycopersicum HOM05D011323 ORTHO05D010674 1.1e-13 84.3 221 34.8
COL.COLO4_29877 Corchorus olitorius HOM05D013130 ORTHO05D022454 2.4e-13 83.2 174 33.9
CSS0012606 Camellia sinensis var. sinensis HOM05D033310 ORTHO05D010674 5.4e-13 82.0 86 50.0
Nitab4.5_0001344g0010 Nicotiana tabacum HOM05D011323 ORTHO05D010674 1.2e-12 80.9 205 33.2
AUR62026679 Chenopodium quinoa HOM05D018884 ORTHO05D010674 2.7e-12 79.7 92 43.5
Thecc.08G155200 Theobroma cacao HOM05D013130 ORTHO05D022454 2.7e-12 79.7 180 34.4
Nitab4.5_0001187g0020 Nicotiana tabacum HOM05D011323 ORTHO05D010674 4.6e-12 79.0 205 33.2
PGR044G2651 Punica granatum HOM05D012764 ORTHO05D010674 6.0e-12 78.6 198 30.8
Peaxi162Scf00079g00245 Petunia axillaris HOM05D011323 ORTHO05D010674 7.8e-12 78.2 183 36.6
CiPaw.16G010100 Carya illinoinensis HOM05D015223 ORTHO05D010674 1.0e-11 77.8 172 34.3
Lj7A375T60 Lonicera japonica HOM05D011323 ORTHO05D010674 3.9e-11 75.9 184 33.7
Cfa018307 Carpinus fangiana HOM05D015223 ORTHO05D010674 6.6e-11 75.1 171 35.1
PGSC0003DMG400006365 Solanum tuberosum HOM05D011323 ORTHO05D010674 6.6e-11 75.1 177 35.6
Duzib116G0432 Durio zibethinus HOM05D013130 ORTHO05D022454 8.7e-11 74.7 179 30.7
FAN24G2902 Fragaria x ananassa HOM05D012764 ORTHO05D017940 3.3e-10 72.8 214 33.6
FvH4_2g13370 Fragaria vesca HOM05D012764 ORTHO05D017940 5.6e-10 72.0 213 33.3
EL10Ac1g01580 Beta vulgaris HOM05D018884 ORTHO05D010674 3.6e-09 69.3 99 40.4
Dinv41063 Davidia involucrata HOM05D011323 ORTHO05D010674 3.6e-09 69.3 123 38.2
RcHm_v2.0_Chr6g0274911 Rosa chinensis HOM05D012764 ORTHO05D017940 6.2e-09 68.6 202 33.7
SGA_v2.0_scaffold108G30881 Striga asiatica HOM05D001241 ORTHO05D010674 6.2e-09 68.6 207 31.9
Hund26684 Selenicereus undatus HOM05D011323 ORTHO05D010674 8.1e-09 68.2 151 33.1
Gohir.A05G244401 Gossypium hirsutum HOM05D013130 ORTHO05D022454 1.1e-08 67.8 547 23.4
FAN20G3084 Fragaria x ananassa HOM05D012764 ORTHO05D017940 9.0e-08 64.7 157 36.3
CANSAT25G2759 Cannabis sativa HOM05D013130 ORTHO05D010674 1.2e-07 64.3 214 32.2
FAN27G3106 Fragaria x ananassa HOM05D012764 ORTHO05D017940 2.0e-07 63.5 228 32.0
Manes.02G181350 Manihot esculenta HOM05D015223 ORTHO05D010674 2.0e-07 63.5 149 31.5
Prupe.8G035200 Prunus persica HOM05D012764 ORTHO05D017940 3.4e-07 62.8 145 34.5
Aa31LG4G6810 Aethionema arabicum HOM05D010491 ORTHO05D012559 7.6e-07 61.6 90 36.7
MSTRG.1096 Avicennia marina HOM05D027784 ORTHO05D010674 7.6e-07 61.6 199 28.6
CARHR070280 Cardamine hirsuta HOM05D010491 ORTHO05D012559 1.7e-06 60.5 87 40.2
Oeu051274.3 Olea europaea HOM05D027784 ORTHO05D010674 2.2e-06 60.1 594 23.6
Phvul.004G092800 Phaseolus vulgaris HOM05D028233 ORTHO05D015681 2.2e-06 60.1 41 63.4
Atru.chr13.2071 Acer truncatum HOM05D036810 ORTHO05D030759 2.9e-06 59.7 193 30.1
Gohir.D05G245401 Gossypium hirsutum HOM05D013130 ORTHO05D022454 4.9e-06 58.9 626 25.4
THA.LOC104812032 Tarenaya hassleriana HOM05D010491 ORTHO05D010674 4.9e-06 58.9 93 36.6
PSO675G1109 Papaver somniferum HOM05D018639 ORTHO05D037265 6.4e-06 58.5 213 29.1


User provided reference genes

Program Settings