Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0343411 Helianthus annuus HOM05D004754 ORTHO05D005566 3.6e-82 308.1 148 100.0
HanXRQChr11g0343421 Helianthus annuus HOM05D004754 ORTHO05D005566 3.6e-82 308.1 148 100.0
HanXRQChr04g0094771 Helianthus annuus HOM05D004754 ORTHO05D005566 9.7e-72 273.5 138 95.7
HanXRQChr03g0076141 Helianthus annuus HOM05D004754 ORTHO05D005566 6.1e-66 254.2 136 89.7
HanXRQChr12g0360561 Helianthus annuus HOM05D004754 ORTHO05D005566 3.8e-52 208.4 136 75.0
ECA240G2987 Erigeron canadensis HOM05D004754 ORTHO05D005566 5.5e-51 204.5 136 73.5
Lsat_1_v5_gn_9_95240 Lactuca sativa HOM05D004754 ORTHO05D005566 6.8e-49 197.6 143 69.9
Dinv32196 Davidia involucrata HOM05D004754 ORTHO05D005566 7.7e-45 184.1 139 66.9
Lj1P1166T28 Lonicera japonica HOM05D004754 ORTHO05D005566 1.7e-44 183.0 138 65.2
CSS0007960 Camellia sinensis var. sinensis HOM05D004754 ORTHO05D005566 2.5e-43 179.1 138 65.9
CSS0038452 Camellia sinensis var. sinensis HOM05D004754 ORTHO05D005566 2.5e-43 179.1 138 65.9
COL.COLO4_17670 Corchorus olitorius HOM05D004754 ORTHO05D005566 9.5e-43 177.2 137 64.2
SalBow6G1352 Salvia bowleyana HOM05D004754 ORTHO05D005566 9.5e-43 177.2 136 63.2
Thecc.02G011000 Theobroma cacao HOM05D004754 ORTHO05D005566 1.6e-42 176.4 139 64.0
TAR626G0708 Trochodendron aralioides HOM05D004754 ORTHO05D005566 1.6e-42 176.4 140 65.0
MBI09_g11913_MAGBIO Magnolia biondii HOM05D004754 ORTHO05D005566 2.1e-42 176.0 138 63.8
Atru.chr10.946 Acer truncatum HOM05D004754 ORTHO05D005566 2.8e-42 175.6 136 62.5
Manes.10G102700 Manihot esculenta HOM05D004754 ORTHO05D005566 2.8e-42 175.6 139 62.6
Hma1.2p1_1418F.1_g282250 Hydrangea macrophylla HOM05D004754 ORTHO05D005566 4.7e-42 174.9 131 62.6
unitig_21.g20734 Utricularia gibba HOM05D004754 ORTHO05D005566 4.7e-42 174.9 138 58.7
Nitab4.5_0005392g0050 Nicotiana tabacum HOM05D004754 ORTHO05D005566 6.1e-42 174.5 134 65.7
DCAR_005794 Daucus carota HOM05D004754 ORTHO05D005566 1.0e-41 173.7 138 61.6
Sopen01g049820 Solanum pennellii HOM05D004754 ORTHO05D005566 1.0e-41 173.7 133 64.7
vmacro03406 Vaccinium macrocarpon HOM05D004754 ORTHO05D005566 1.0e-41 173.7 137 63.5
CAN.G1231.9 Capsicum annuum HOM05D004754 ORTHO05D005566 1.4e-41 173.3 133 63.9
CAN.G3385.2 Capsicum annuum HOM05D004754 ORTHO05D005566 1.4e-41 173.3 133 63.9
MBI10_g08558_MAGBIO Magnolia biondii HOM05D004754 ORTHO05D005566 1.4e-41 173.3 139 61.9
QL05p054004 Quercus lobata HOM05D004754 ORTHO05D005566 1.4e-41 173.3 138 61.6
Atru.chr10.952 Acer truncatum HOM05D004754 ORTHO05D005566 1.8e-41 172.9 136 61.8
Cpa.g.sc17.70 Carica papaya HOM05D004754 ORTHO05D005566 1.8e-41 172.9 140 61.4
Potri.017G048600 Populus trichocarpa HOM05D004754 ORTHO05D005566 1.8e-41 172.9 135 65.2
Gohir.A08G179300 Gossypium hirsutum HOM05D004754 ORTHO05D005566 3.0e-41 172.2 137 61.3
TWI53G1117 Tripterygium wilfordii HOM05D004754 ORTHO05D005566 4.0e-41 171.8 139 62.6
ClCG03G006380 Citrullus lanatus HOM05D004754 ORTHO05D005566 5.2e-41 171.4 136 62.5
Nitab4.5_0002815g0050 Nicotiana tabacum HOM05D004754 ORTHO05D005566 5.2e-41 171.4 134 64.2
Potri.007G112300 Populus trichocarpa HOM05D004754 ORTHO05D005566 5.2e-41 171.4 133 63.2
QL08p010099 Quercus lobata HOM05D004754 ORTHO05D005566 5.2e-41 171.4 138 60.9
PGSC0003DMG400025770 Solanum tuberosum HOM05D004754 ORTHO05D005566 5.2e-41 171.4 133 63.9
Gorai.004G208700 Gossypium raimondii HOM05D004754 ORTHO05D005566 8.9e-41 170.6 137 61.3
Haze_09498 Corylus avellana HOM05D004754 ORTHO05D005566 1.2e-40 170.2 131 63.4
MSTRG.16715 Avicennia marina HOM05D004754 ORTHO05D005566 1.5e-40 169.9 138 61.6
Cfa020535 Carpinus fangiana HOM05D004754 ORTHO05D005566 1.5e-40 169.9 138 60.9
Rhsim13G0119600 Rhododendron simsii HOM05D004754 ORTHO05D005566 1.5e-40 169.9 137 61.3
RcHm_v2.0_Chr5g0052721 Rosa chinensis HOM05D004754 ORTHO05D005566 1.5e-40 169.9 138 59.4
Manes.07G037300 Manihot esculenta HOM05D004754 ORTHO05D005566 2.0e-40 169.5 134 63.4
CDE02G1350 Ceratophyllum demersum HOM05D004754 ORTHO05D005566 2.6e-40 169.1 136 61.0
Duzib248G0043 Durio zibethinus HOM05D004754 ORTHO05D005566 2.6e-40 169.1 137 62.8
Gorai.013G128400 Gossypium raimondii HOM05D004754 ORTHO05D005566 3.4e-40 168.7 137 60.6
RcHm_v2.0_Chr5g0015381 Rosa chinensis HOM05D004754 ORTHO05D005566 3.4e-40 168.7 138 59.4
MD09G1087500 Malus domestica HOM05D004754 ORTHO05D005566 5.7e-40 167.9 132 61.4
TAR624G1057 Trochodendron aralioides HOM05D004754 ORTHO05D005566 5.7e-40 167.9 135 63.7
Gohir.D08G197900 Gossypium hirsutum HOM05D004754 ORTHO05D005566 9.8e-40 167.2 137 60.6
CiPaw.12G121800 Carya illinoinensis HOM05D004754 ORTHO05D005566 1.3e-39 166.8 133 61.7
Sc12g0003070 Simmondsia chinensis HOM05D004754 ORTHO05D005566 1.3e-39 166.8 139 57.6
Dinv15895 Davidia involucrata HOM05D004754 ORTHO05D005566 1.7e-39 166.4 138 60.1
Sabra07G0091800 Salix brachista HOM05D004754 ORTHO05D005566 2.2e-39 166.0 135 62.2
CANSAT64G0220 Cannabis sativa HOM05D004754 ORTHO05D005566 2.8e-39 165.6 136 58.8
Cc02_g19240 Coffea canephora HOM05D004754 ORTHO05D005566 2.8e-39 165.6 134 62.7
Migut.B00386 Erythranthe guttata HOM05D004754 ORTHO05D005566 2.8e-39 165.6 140 58.6
VMungo1309G0019 Vigna mungo HOM05D004754 ORTHO05D005566 3.7e-39 165.2 139 60.4
Ah.02g113940 Amaranthus hybridus HOM05D004754 ORTHO05D005566 6.3e-39 164.5 137 56.9
MELO3C015347.2 Cucumis melo HOM05D004754 ORTHO05D005566 6.3e-39 164.5 136 58.8
MD17G1076300 Malus domestica HOM05D004754 ORTHO05D005566 6.3e-39 164.5 133 58.6
Aqoxy7G03057 Aquilegia oxysepala HOM05D004754 ORTHO05D005566 8.3e-39 164.1 131 58.8
Eucgr.K03201 Eucalyptus grandis HOM05D004754 ORTHO05D005566 8.3e-39 164.1 136 59.6
PGR031G3887 Punica granatum HOM05D004754 ORTHO05D005566 8.3e-39 164.1 136 58.8
Eucgr.E02475 Eucalyptus grandis HOM05D004754 ORTHO05D005566 1.1e-38 163.7 136 57.4
Lj2g0020778 Lotus japonicus HOM05D004754 ORTHO05D005566 1.4e-38 163.3 137 59.9
Prupe.3G237900 Prunus persica HOM05D004754 ORTHO05D005566 1.4e-38 163.3 134 60.4
AUR62008508 Chenopodium quinoa HOM05D004754 ORTHO05D005566 1.8e-38 162.9 132 59.8
Ciclev10015850m.g Citrus clementina HOM05D004754 ORTHO05D005566 1.8e-38 162.9 138 59.4
Glyma.14G055800 Glycine max HOM05D004754 ORTHO05D005566 1.8e-38 162.9 137 57.7
Oeu018596.1 Olea europaea HOM05D004754 ORTHO05D005566 1.8e-38 162.9 138 60.9
Sed0000755 Sechium edule HOM05D004754 ORTHO05D005566 1.8e-38 162.9 136 58.8
Sc12g0003000 Simmondsia chinensis HOM05D004754 ORTHO05D005566 1.8e-38 162.9 138 55.8
AT4G05440 Arabidopsis thaliana HOM05D004754 ORTHO05D005566 2.4e-38 162.5 137 57.7
CARHR252140 Cardamine hirsuta HOM05D004754 ORTHO05D005566 2.4e-38 162.5 138 57.2
Sc10g0000250 Simmondsia chinensis HOM05D004754 ORTHO05D005566 2.4e-38 162.5 140 57.1
CsaV3_1G039230 Cucumis sativus L. HOM05D004754 ORTHO05D005566 3.1e-38 162.2 136 58.8
Rhsim01G0266600 Rhododendron simsii HOM05D004754 ORTHO05D005566 3.1e-38 162.2 137 59.9
Ca_02551_v3 Cicer arietinum L. HOM05D004754 ORTHO05D005566 4.1e-38 161.8 138 58.7
PSO210G1456 Papaver somniferum HOM05D004754 ORTHO05D005566 4.1e-38 161.8 138 55.8
BcaC04g23945 Brassica carinata HOM05D004754 ORTHO05D005566 7.0e-38 161.0 136 55.1
C09p03030 Brassica napus HOM05D004754 ORTHO05D005566 7.0e-38 161.0 136 55.1
PSO210G6921 Papaver somniferum HOM05D004754 ORTHO05D005566 7.0e-38 161.0 138 56.5
Sp6g03640 Schrenkiella parvula HOM05D004754 ORTHO05D005566 7.0e-38 161.0 137 56.9
Hund19582 Selenicereus undatus HOM05D004754 ORTHO05D005566 9.2e-38 160.6 137 59.1
AL6G49030 Arabidopsis lyrata HOM05D004754 ORTHO05D005566 1.2e-37 160.2 137 56.9
FAN15G1860 Fragaria x ananassa HOM05D004754 ORTHO05D005566 1.2e-37 160.2 138 55.8
Lsat_1_v5_gn_9_95201 Lactuca sativa HOM05D004754 ORTHO05D005566 1.2e-37 160.2 136 62.5
Psat5g233520 Pisum sativum HOM05D004754 ORTHO05D005566 1.2e-37 160.2 138 58.7
FvH4_2g14961 Fragaria vesca HOM05D004754 ORTHO05D005566 1.6e-37 159.8 138 56.5
FAN24G0458 Fragaria x ananassa HOM05D004754 ORTHO05D005566 1.6e-37 159.8 138 56.5
Ca_14146_v3 Cicer arietinum L. HOM05D004754 ORTHO05D005566 2.7e-37 159.1 136 58.8
Carub.0006s3335 Capsella rubella HOM05D004754 ORTHO05D005566 3.5e-37 158.7 137 56.9
Phvul.009G217100 Phaseolus vulgaris HOM05D004754 ORTHO05D005566 3.5e-37 158.7 137 57.7
Psat0s5166g0080 Pisum sativum HOM05D004754 ORTHO05D005566 3.5e-37 158.7 137 57.7
BcaB01g01919 Brassica carinata HOM05D004754 ORTHO05D005566 7.8e-37 157.5 136 55.1
TPR.G33233 Trifolium pratense HOM05D004754 ORTHO05D005566 7.8e-37 157.5 138 58.0
Lalb_Chr12g0204271 Lupinus albus HOM05D004754 ORTHO05D005566 1.7e-36 156.4 138 58.7
Lalb_Chr12g0204311 Lupinus albus HOM05D004754 ORTHO05D005566 1.7e-36 156.4 138 58.7
EL10Ac5g11113 Beta vulgaris HOM05D004754 ORTHO05D005566 2.3e-36 156.0 137 54.7
BolC9t53233H Brassica oleracea HOM05D004754 ORTHO05D005566 2.9e-36 155.6 136 53.7
AUR62004920 Chenopodium quinoa HOM05D004754 ORTHO05D005566 2.9e-36 155.6 137 55.5
Medtr0393s0030 Medicago truncatula HOM05D004754 ORTHO05D005566 2.9e-36 155.6 138 58.0
SGA_v2.0_scaffold172G38987 Striga asiatica HOM05D004754 ORTHO05D005566 2.9e-36 155.6 136 57.4
Oeu010398.1 Olea europaea HOM05D004754 ORTHO05D005566 3.8e-36 155.2 131 58.8
Prupe.1G099600 Prunus persica HOM05D004754 ORTHO05D005566 5.0e-36 154.8 134 56.7
AUR62001036 Chenopodium quinoa HOM05D004754 ORTHO05D005566 6.6e-36 154.5 137 55.5
THA.LOC104812357 Tarenaya hassleriana HOM05D004754 ORTHO05D005566 8.6e-36 154.1 138 55.1
Medtr3g010310 Medicago truncatula HOM05D004754 ORTHO05D005566 1.1e-35 153.7 138 58.0
AUR62021582 Chenopodium quinoa HOM05D004754 ORTHO05D005566 1.9e-35 152.9 120 61.7
TPR.G5080 Trifolium pratense HOM05D004754 ORTHO05D005566 2.5e-35 152.5 131 58.8
A09p02940 Brassica napus HOM05D004754 ORTHO05D005566 1.2e-34 150.2 137 54.0
BraA09t35937Z Brassica rapa HOM05D004754 ORTHO05D005566 1.2e-34 150.2 137 54.0
Zm00001eb126310 Zea mays HOM05D004754 ORTHO05D005566 1.5e-32 143.3 138 50.7
Aa31LG9G9140 Aethionema arabicum HOM05D004754 ORTHO05D005566 2.6e-32 142.5 137 54.7
vmacro08577 Vaccinium macrocarpon HOM05D004754 ORTHO05D005566 9.2e-30 134.0 101 66.3
Actinidia13483 Actinidia chinensis HOM05D004754 ORTHO05D005566 2.0e-29 132.9 118 57.6
Thhalv10028820m.g Eutrema salsugineum HOM05D004754 ORTHO05D005566 1.7e-28 129.8 136 48.5
Migut.N02733 Erythranthe guttata HOM05D004754 ORTHO05D005566 3.9e-28 128.6 125 52.8
AL6G49110 Arabidopsis lyrata HOM05D004754 ORTHO05D005566 5.0e-28 128.3 136 48.5
SMO144G0026 Selaginella moellendorffii HOM05D004754 ORTHO05D005566 6.6e-28 127.9 143 49.0
AagrBONN_evm.TU.Sc2ySwM_228.5754 Anthoceros agrestis HOM05D004754 ORTHO05D005566 2.5e-27 125.9 139 45.3
ATR0584G072 Amborella trichopoda HOM05D004754 ORTHO05D005566 6.2e-26 121.3 183 38.3
PSO675G6933 Papaver somniferum HOM05D004754 ORTHO05D005566 1.8e-25 119.8 108 53.7
GSVIVG01027347001 Vitis vinifera HOM05D004754 ORTHO05D005566 1.8e-25 119.8 136 50.7
SEGI_36860 Sequoiadendron giganteum HOM05D004754 ORTHO05D005566 2.3e-25 119.4 167 42.5
GSVIVG01021588001 Vitis vinifera HOM05D004754 ORTHO05D005566 1.2e-24 117.1 136 48.5
AagrBONN_evm.TU.Sc2ySwM_344.1746 Anthoceros agrestis HOM05D004754 ORTHO05D005566 1.7e-23 113.2 178 36.5
QL05p054023 Quercus lobata HOM05D004754 ORTHO05D005566 3.2e-22 109.0 88 56.8
RcHm_v2.0_Chr5g0052651 Rosa chinensis HOM05D004754 ORTHO05D005566 4.1e-22 108.6 108 51.9
Medtr2g048690 Medicago truncatula HOM05D004754 ORTHO05D005566 1.2e-21 107.1 136 44.9
Pp3c20_22950 Physcomitrium patens HOM05D004754 ORTHO05D005566 1.6e-21 106.7 135 44.4
Mapoly0049s0079 Marchantia polymorpha HOM05D004754 ORTHO05D005566 8.6e-20 100.9 91 54.9
Glyma.02G261200 Glycine max HOM05D004754 ORTHO05D005566 3.3e-19 99.0 90 55.6
CBR_g50844 Chara braunii HOM05D004754 ORTHO05D005566 1.6e-18 96.7 92 50.0
Medtr8g072370 Medicago truncatula HOM05D004754 ORTHO05D005566 4.4e-16 88.6 78 55.1
Haze_09496 Corylus avellana HOM05D004754 ORTHO05D005566 1.7e-15 86.7 74 56.8
MCO03G595 Micromonas commoda HOM05D004754 ORTHO05D005566 4.1e-14 82.0 94 44.7
PRCOL_00002688 Prasinoderma coloniale HOM05D004754 ORTHO05D005566 4.1e-14 82.0 156 34.6
HPP92_027351 Vanilla planifolia HOM05D004754 ORTHO05D005566 1.0e-12 77.4 74 44.6
Atru.chr10.956 Acer truncatum HOM05D004754 ORTHO05D005566 3.9e-12 75.5 74 51.4
Cre07.g312100 Chlamydomonas reinhardtii HOM05D004754 ORTHO05D005566 2.6e-08 62.8 97 38.1


User provided reference genes

Program Settings