Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0343091 Helianthus annuus HOM05D003922 ORTHO05D004492 2.9e-79 298.5 153 100.0
ECA248G0756 Erigeron canadensis HOM05D003922 ORTHO05D004492 3.2e-70 268.5 153 85.6
Lsat_1_v5_gn_1_74581 Lactuca sativa HOM05D003922 ORTHO05D004492 2.1e-69 265.8 152 86.8
Lj6A217G7 Lonicera japonica HOM05D003922 ORTHO05D004492 1.0e-60 236.9 148 75.7
Oeu050329.1 Olea europaea HOM05D003922 ORTHO05D004492 8.8e-60 233.8 147 77.6
Dinv18325 Davidia involucrata HOM05D003922 ORTHO05D004492 1.5e-59 233.0 148 78.4
GSVIVG01035132001 Vitis vinifera HOM05D003922 ORTHO05D004492 1.5e-59 233.0 148 75.7
Actinidia27120 Actinidia chinensis HOM05D003922 ORTHO05D004492 1.3e-58 229.9 147 76.9
DCAR_005455 Daucus carota HOM05D003922 ORTHO05D004492 8.2e-58 227.3 148 75.0
TAR633G0046 Trochodendron aralioides HOM05D003922 ORTHO05D004492 8.2e-58 227.3 149 72.5
CSS0002835 Camellia sinensis var. sinensis HOM05D003922 ORTHO05D004492 1.1e-57 226.9 147 71.4
Rhsim09G0008700 Rhododendron simsii HOM05D003922 ORTHO05D004492 1.4e-57 226.5 147 73.5
vmacro00688 Vaccinium macrocarpon HOM05D003922 ORTHO05D004492 2.4e-57 225.7 147 74.1
CSS0038398 Camellia sinensis var. sinensis HOM05D003922 ORTHO05D004492 5.3e-57 224.6 147 70.7
Nn2g13969 Nelumbo nucifera HOM05D003922 ORTHO05D004492 1.6e-56 223.0 148 70.9
Cpa.g.sc9.377 Carica papaya HOM05D003922 ORTHO05D004492 3.5e-56 221.9 147 71.4
CSS0049854 Camellia sinensis var. sinensis HOM05D003922 ORTHO05D004492 4.5e-56 221.5 147 72.8
Sc19g0002260 Simmondsia chinensis HOM05D003922 ORTHO05D004492 5.9e-56 221.1 147 74.1
PGSC0003DMG400016054 Solanum tuberosum HOM05D003922 ORTHO05D004492 7.7e-56 220.7 147 72.8
Cc03_g14390 Coffea canephora HOM05D003922 ORTHO05D004492 1.3e-55 219.9 146 74.0
Thecc.04G164400 Theobroma cacao HOM05D003922 ORTHO05D004492 1.3e-55 219.9 147 70.7
Duzib268G1060 Durio zibethinus HOM05D003922 ORTHO05D004492 2.2e-55 219.2 147 70.7
Solyc08g014300.4 Solanum lycopersicum HOM05D003922 ORTHO05D004492 2.9e-55 218.8 147 70.7
Sopen08g005210 Solanum pennellii HOM05D003922 ORTHO05D004492 2.9e-55 218.8 147 70.7
PGR142G3702 Punica granatum HOM05D003922 ORTHO05D004492 3.8e-55 218.4 147 72.1
THA.LOC104800922 Tarenaya hassleriana HOM05D003922 ORTHO05D004492 3.8e-55 218.4 147 70.1
Hund03208 Selenicereus undatus HOM05D003922 ORTHO05D004492 5.0e-55 218.0 149 72.5
EL10Ac3g06102 Beta vulgaris HOM05D003922 ORTHO05D004492 1.5e-54 216.5 151 70.2
Gohir.A09G213608 Gossypium hirsutum HOM05D003922 ORTHO05D004492 3.2e-54 215.3 147 70.1
Gohir.D09G212300 Gossypium hirsutum HOM05D003922 ORTHO05D004492 3.2e-54 215.3 147 70.1
Gorai.006G232100 Gossypium raimondii HOM05D003922 ORTHO05D004492 3.2e-54 215.3 147 70.1
THA.LOC104815872 Tarenaya hassleriana HOM05D003922 ORTHO05D004492 3.2e-54 215.3 147 68.7
PGSC0003DMG400016330 Solanum tuberosum HOM05D003922 ORTHO05D004492 9.4e-54 213.8 149 71.1
Sopen06g018570 Solanum pennellii HOM05D003922 ORTHO05D004492 1.2e-53 213.4 149 71.1
Aa31LG5G5270 Aethionema arabicum HOM05D003922 ORTHO05D004492 1.6e-53 213.0 149 65.8
BcaC07g42112 Brassica carinata HOM05D003922 ORTHO05D004492 2.1e-53 212.6 147 66.7
TWI63G0384 Tripterygium wilfordii HOM05D003922 ORTHO05D004492 2.1e-53 212.6 147 68.7
Manes.05G137000 Manihot esculenta HOM05D003922 ORTHO05D004492 2.7e-53 212.2 147 68.7
Eucgr.H00289 Eucalyptus grandis HOM05D003922 ORTHO05D004492 3.6e-53 211.8 147 68.7
Sp4g14200 Schrenkiella parvula HOM05D003922 ORTHO05D004492 6.1e-53 211.1 147 67.3
A09p67310 Brassica napus HOM05D003922 ORTHO05D004492 1.0e-52 210.3 147 66.0
Thhalv10017374m.g Eutrema salsugineum HOM05D003922 ORTHO05D004492 1.0e-52 210.3 147 66.7
Potri.013G127400 Populus trichocarpa HOM05D003922 ORTHO05D004492 1.4e-52 209.9 146 68.5
Migut.N03060 Erythranthe guttata HOM05D003922 ORTHO05D004492 1.8e-52 209.5 147 69.4
Peaxi162Scf00075g01329 Petunia axillaris HOM05D003922 ORTHO05D004492 1.8e-52 209.5 147 71.4
Ciclev10022699m.g Citrus clementina HOM05D003922 ORTHO05D004492 3.0e-52 208.8 147 68.0
Sp1g04550 Schrenkiella parvula HOM05D003922 ORTHO05D004492 3.0e-52 208.8 147 64.6
AT2G31725 Arabidopsis thaliana HOM05D003922 ORTHO05D004492 5.2e-52 208.0 147 65.3
MSTRG.22037 Avicennia marina HOM05D003922 ORTHO05D004492 5.2e-52 208.0 148 68.9
C04p18050 Brassica napus HOM05D003922 ORTHO05D004492 5.2e-52 208.0 147 66.0
BolC4t23353H Brassica oleracea HOM05D003922 ORTHO05D004492 5.2e-52 208.0 147 66.0
AL4G26980 Arabidopsis lyrata HOM05D003922 ORTHO05D004492 6.8e-52 207.6 147 64.6
ClCG11G013550 Citrullus lanatus HOM05D003922 ORTHO05D004492 6.8e-52 207.6 149 67.8
Os11g0256200 Oryza sativa ssp. japonica HOM05D003922 ORTHO05D004492 6.8e-52 207.6 148 64.9
Sabra13G0106500 Salix brachista HOM05D003922 ORTHO05D004492 6.8e-52 207.6 146 67.8
MD04G1037100 Malus domestica HOM05D003922 ORTHO05D004492 8.8e-52 207.2 148 66.9
PSO017G0931 Papaver somniferum HOM05D003922 ORTHO05D004492 8.8e-52 207.2 146 67.1
BcaC02g11282 Brassica carinata HOM05D003922 ORTHO05D004492 1.2e-51 206.8 147 66.0
MELO3C011855.2 Cucumis melo HOM05D003922 ORTHO05D004492 1.2e-51 206.8 147 68.0
CsaV3_5G030170 Cucumis sativus L. HOM05D003922 ORTHO05D004492 1.2e-51 206.8 147 68.7
DCAR_027517 Daucus carota HOM05D003922 ORTHO05D004492 1.2e-51 206.8 152 64.5
Thhalv10009017m.g Eutrema salsugineum HOM05D003922 ORTHO05D004492 1.2e-51 206.8 147 63.9
Sed0023559 Sechium edule HOM05D003922 ORTHO05D004492 1.2e-51 206.8 147 68.0
AL1G15640 Arabidopsis lyrata HOM05D003922 ORTHO05D004492 1.5e-51 206.5 147 64.6
Carub.0004s1303 Capsella rubella HOM05D003922 ORTHO05D004492 1.5e-51 206.5 152 65.8
CARHR005250 Cardamine hirsuta HOM05D003922 ORTHO05D004492 2.0e-51 206.1 147 63.9
PSO573G0028 Papaver somniferum HOM05D003922 ORTHO05D004492 2.0e-51 206.1 146 66.4
unitig_578.g16270 Utricularia gibba HOM05D003922 ORTHO05D004492 2.0e-51 206.1 143 69.2
AT1G05730 Arabidopsis thaliana HOM05D003922 ORTHO05D004492 2.6e-51 205.7 147 65.3
BcaB02g10413 Brassica carinata HOM05D003922 ORTHO05D004492 4.4e-51 204.9 147 64.6
CAN.G1401.2 Capsicum annuum HOM05D003922 ORTHO05D004492 4.4e-51 204.9 148 68.9
CANSAT56G1338 Cannabis sativa HOM05D003922 ORTHO05D004492 5.7e-51 204.5 146 66.4
SalBow6G3114 Salvia bowleyana HOM05D003922 ORTHO05D004492 7.5e-51 204.1 149 68.5
BraA09t42062Z Brassica rapa HOM05D003922 ORTHO05D004492 1.3e-50 203.4 154 63.0
CiPaw.01G168800 Carya illinoinensis HOM05D003922 ORTHO05D004492 1.3e-50 203.4 147 66.7
MSTRG.24564 Avicennia marina HOM05D003922 ORTHO05D004492 1.7e-50 203.0 147 66.7
Atru.chr4.1453 Acer truncatum HOM05D003922 ORTHO05D004492 2.8e-50 202.2 147 66.7
CARHR125410 Cardamine hirsuta HOM05D003922 ORTHO05D004492 2.8e-50 202.2 151 60.9
Aqoxy2G04156 Aquilegia oxysepala HOM05D003922 ORTHO05D004492 4.8e-50 201.4 149 65.1
Lj6A207G21 Lonicera japonica HOM05D003922 ORTHO05D004492 4.8e-50 201.4 191 57.1
BolC8t52690H Brassica oleracea HOM05D003922 ORTHO05D004492 8.3e-50 200.7 157 61.1
CAN.G759.3 Capsicum annuum HOM05D003922 ORTHO05D004492 8.3e-50 200.7 147 64.6
Cfa015673 Carpinus fangiana HOM05D003922 ORTHO05D004492 8.3e-50 200.7 147 66.7
Nitab4.5_0004700g0050 Nicotiana tabacum HOM05D003922 ORTHO05D004492 1.8e-49 199.5 169 61.5
Oeu015712.2 Olea europaea HOM05D003922 ORTHO05D004492 3.1e-49 198.7 219 51.6
RcHm_v2.0_Chr4g0405841 Rosa chinensis HOM05D003922 ORTHO05D004492 3.1e-49 198.7 149 63.1
Prupe.1G185700 Prunus persica HOM05D003922 ORTHO05D004492 5.4e-49 198.0 150 64.7
C08p51620 Brassica napus HOM05D003922 ORTHO05D004492 2.0e-48 196.1 158 60.8
BraA05t20315Z Brassica rapa HOM05D003922 ORTHO05D004492 2.0e-48 196.1 159 59.7
SGA_v2.0_scaffold25G11004 Striga asiatica HOM05D003922 ORTHO05D004492 3.5e-48 195.3 148 63.5
Phvul.005G007000 Phaseolus vulgaris HOM05D003922 ORTHO05D004492 1.0e-47 193.7 147 65.3
QL10p056544 Quercus lobata HOM05D003922 ORTHO05D004492 1.3e-47 193.4 149 61.7
SGA_v2.0_scaffold19G08849 Striga asiatica HOM05D003922 ORTHO05D004492 2.2e-47 192.6 159 60.4
Zm00001eb169120 Zea mays HOM05D003922 ORTHO05D004492 2.2e-47 192.6 140 62.1
FvH4_3g34590 Fragaria vesca HOM05D003922 ORTHO05D004492 3.8e-47 191.8 142 64.1
FAN11G1624 Fragaria x ananassa HOM05D003922 ORTHO05D004492 3.8e-47 191.8 142 64.1
FAN25G1394 Fragaria x ananassa HOM05D003922 ORTHO05D004492 3.8e-47 191.8 142 64.1
TPR.G16707 Trifolium pratense HOM05D003922 ORTHO05D004492 3.8e-47 191.8 151 62.9
AUR62002412 Chenopodium quinoa HOM05D003922 ORTHO05D004492 5.0e-47 191.4 147 63.3
FAN02G1921 Fragaria x ananassa HOM05D003922 ORTHO05D004492 5.0e-47 191.4 144 63.2
FAN06G3125 Fragaria x ananassa HOM05D003922 ORTHO05D004492 5.0e-47 191.4 144 63.2
Lalb_Chr18g0048821 Lupinus albus HOM05D003922 ORTHO05D004492 6.5e-47 191.0 151 62.9
FAN21G3935 Fragaria x ananassa HOM05D003922 ORTHO05D004492 8.5e-47 190.7 142 63.4
Glyma.06G319900 Glycine max HOM05D003922 ORTHO05D004492 8.5e-47 190.7 153 60.8
Carub.0001s0508 Capsella rubella HOM05D003922 ORTHO05D004492 1.1e-46 190.3 147 60.5
FAN16G1833 Fragaria x ananassa HOM05D003922 ORTHO05D004492 1.1e-46 190.3 142 63.4
CDE09G1276 Ceratophyllum demersum HOM05D003922 ORTHO05D004492 1.5e-46 189.9 147 62.6
COL.COLO4_38113 Corchorus olitorius HOM05D003922 ORTHO05D004492 2.5e-46 189.1 132 68.9
Glyma.02G058200 Glycine max HOM05D003922 ORTHO05D004492 3.2e-46 188.7 153 60.8
ATR0743G180 Amborella trichopoda HOM05D003922 ORTHO05D004492 4.2e-46 188.3 140 64.3
Duzib151G1155 Durio zibethinus HOM05D003922 ORTHO05D004492 4.2e-46 188.3 181 54.7
Lj3g0023756 Lotus japonicus HOM05D003922 ORTHO05D004492 7.2e-46 187.6 147 61.9
THA.LOC104804105 Tarenaya hassleriana HOM05D003922 ORTHO05D004492 7.2e-46 187.6 142 62.7
Glyma.04G117900 Glycine max HOM05D003922 ORTHO05D004492 9.4e-46 187.2 147 63.3
Peaxi162Scf00579g00013 Petunia axillaris HOM05D003922 ORTHO05D004492 2.1e-45 186.0 147 66.0
AT2G43720 Arabidopsis thaliana HOM05D003922 ORTHO05D004492 2.7e-45 185.7 141 61.7
Ca_14117_v3 Cicer arietinum L. HOM05D003922 ORTHO05D004492 2.7e-45 185.7 147 61.9
Psat5g230680 Pisum sativum HOM05D003922 ORTHO05D004492 3.6e-45 185.3 147 62.6
Zm00001eb169100 Zea mays HOM05D003922 ORTHO05D004492 3.6e-45 185.3 140 60.0
Medtr3g009130 Medicago truncatula HOM05D003922 ORTHO05D004492 8.0e-45 184.1 147 61.9
AL4G42550 Arabidopsis lyrata HOM05D003922 ORTHO05D004492 1.4e-44 183.3 143 58.7
VMungo1080G1004 Vigna mungo HOM05D003922 ORTHO05D004492 1.4e-44 183.3 147 61.2
Sp4g25790 Schrenkiella parvula HOM05D003922 ORTHO05D004492 4.0e-44 181.8 141 60.3
CARHR138910 Cardamine hirsuta HOM05D003922 ORTHO05D004492 5.2e-44 181.4 141 58.9
arahy.Tifrunner.gnm1.ann1.D9AT9V Arachis hypogaea HOM05D003922 ORTHO05D004492 8.8e-44 180.6 147 60.5
BcaC02g07156 Brassica carinata HOM05D000941 ORTHO05D004492 2.6e-43 179.1 147 56.5
BolC4t28571H Brassica oleracea HOM05D003922 ORTHO05D004492 2.6e-43 179.1 147 56.5
HPP92_023724 Vanilla planifolia HOM05D003922 ORTHO05D004492 1.3e-42 176.8 147 59.2
Carub.0004s2626 Capsella rubella HOM05D003922 ORTHO05D004492 3.7e-42 175.3 141 58.2
A04p33020 Brassica napus HOM05D003922 ORTHO05D004492 4.9e-42 174.9 140 57.9
C04p70710 Brassica napus HOM05D003922 ORTHO05D004492 4.9e-42 174.9 140 57.9
BraA04t18761Z Brassica rapa HOM05D003922 ORTHO05D004492 4.9e-42 174.9 140 57.9
Thhalv10001669m.g Eutrema salsugineum HOM05D003922 ORTHO05D004492 6.3e-42 174.5 141 58.9
BcaB06g29344 Brassica carinata HOM05D003922 ORTHO05D004492 2.4e-41 172.6 140 57.9
CiPaw.02G099200 Carya illinoinensis HOM05D003922 ORTHO05D004492 1.2e-40 170.2 137 60.6
MBI07_g11491_MAGBIO Magnolia biondii HOM05D003922 ORTHO05D004492 1.2e-40 170.2 144 59.0
Lj3P164T1 Lonicera japonica HOM05D003922 ORTHO05D004492 1.6e-40 169.9 105 74.3
Lju359P1T4 Lonicera japonica HOM05D003922 ORTHO05D004492 1.6e-40 169.9 105 74.3
BcaC07g42117 Brassica carinata HOM05D003922 ORTHO05D004492 1.5e-35 153.3 148 55.4
BcaC07g42114 Brassica carinata HOM05D003922 ORTHO05D004492 5.4e-33 144.8 105 61.9
arahy.Tifrunner.gnm1.ann1.1Q5EFH Arachis hypogaea HOM05D003922 ORTHO05D004492 7.0e-33 144.4 147 51.7
CDE04G0234 Ceratophyllum demersum HOM05D003922 ORTHO05D004492 2.7e-32 142.5 89 75.3
A05p13780 Brassica napus HOM05D003922 ORTHO05D004492 3.5e-32 142.1 104 60.6
Nitab4.5_0007474g0040 Nicotiana tabacum HOM05D003922 ORTHO05D004492 5.9e-32 141.4 132 53.8
Aa31LG1G25440 Aethionema arabicum HOM05D003922 ORTHO05D004492 7.8e-32 141.0 105 61.0
arahy.Tifrunner.gnm1.ann1.H4TYTD Arachis hypogaea HOM05D003922 ORTHO05D004492 1.1e-30 137.1 147 51.0
Glyma.06G288100 Glycine max HOM05D003922 ORTHO05D004492 1.1e-30 137.1 134 50.7
Glyma.06G288300 Glycine max HOM05D003922 ORTHO05D004492 1.1e-30 137.1 134 50.7
Haze_00850 Corylus avellana HOM05D003922 ORTHO05D004492 3.3e-30 135.6 99 64.6
Solyc06g053490.4 Solanum lycopersicum HOM05D003922 ORTHO05D004492 5.6e-30 134.8 89 73.0
Nitab4.5_0000013g0490 Nicotiana tabacum HOM05D003922 ORTHO05D004492 1.6e-29 133.3 89 73.0
Haze_00864 Corylus avellana HOM05D003922 ORTHO05D004492 2.3e-28 129.4 105 61.0
Glyma.06G320000 Glycine max HOM05D003922 ORTHO05D004492 2.6e-27 125.9 143 45.5
Carub.0001s0509 Capsella rubella HOM05D003922 ORTHO05D004492 9.2e-25 117.5 91 56.0
Glyma.06G288000 Glycine max HOM05D003922 ORTHO05D004492 9.2e-25 117.5 148 41.2
Lsat_1_v5_gn_3_36701 Lactuca sativa HOM05D003922 ORTHO05D004492 1.3e-23 113.6 107 57.0
Pp3c22_16840 Physcomitrium patens HOM05D003922 ORTHO05D004492 1.7e-23 113.2 137 45.3
SEGI_40113 Sequoiadendron giganteum HOM05D003922 ORTHO05D004492 1.7e-23 113.2 86 58.1
Psat3g002600 Pisum sativum HOM05D003321 ORTHO05D004492 3.0e-23 112.5 82 63.4
AagrBONN_evm.TU.Sc2ySwM_228.3693 Anthoceros agrestis HOM05D003922 ORTHO05D004492 1.1e-22 110.5 141 36.2
arahy.Tifrunner.gnm1.ann1.GG9VXM Arachis hypogaea HOM05D003922 ORTHO05D004492 1.6e-21 106.7 147 45.6
SMO174G0123 Selaginella moellendorffii HOM05D003922 ORTHO05D004492 7.5e-19 97.8 136 31.6
AT1G05740 Arabidopsis thaliana HOM05D003922 ORTHO05D004492 3.7e-18 95.5 138 37.0
SMO116G0121 Selaginella moellendorffii HOM05D003922 ORTHO05D004492 1.6e-16 90.1 107 37.4
SMO174G0129 Selaginella moellendorffii HOM05D003922 ORTHO05D004492 1.6e-16 90.1 139 30.9
Glyma.06G288200 Glycine max HOM05D003922 ORTHO05D004492 1.7e-15 86.7 148 35.1
arahy.Tifrunner.gnm1.ann1.V6LTI0 Arachis hypogaea HOM05D003922 ORTHO05D004492 3.0e-15 85.9 71 60.6
BcaB05g24674 Brassica carinata HOM05D001689 ORTHO05D004492 8.9e-12 74.3 52 63.5
CBR_g3774 Chara braunii HOM05D003922 ORTHO05D004492 1.2e-11 73.9 129 29.5
Mapoly0006s0297 Marchantia polymorpha HOM05D003922 ORTHO05D004492 2.0e-11 73.2 135 29.6
arahy.Tifrunner.gnm1.ann1.DMY77W Arachis hypogaea HOM05D003922 ORTHO05D004492 1.3e-10 70.5 87 42.5
CiPaw.16G066500 Carya illinoinensis HOM05D003922 ORTHO05D004492 2.9e-10 69.3 88 45.5
AL1G15650 Arabidopsis lyrata HOM05D003922 ORTHO05D004492 6.4e-10 68.2 82 46.3
AUR62023777 Chenopodium quinoa HOM05D003922 ORTHO05D004492 4.1e-09 65.5 46 67.4
Cre12.g551900 Chlamydomonas reinhardtii HOM05D003922 ORTHO05D004492 5.4e-09 65.1 132 29.5
BcaB05g25136 Brassica carinata HOM05D003922 ORTHO05D004492 1.0e-07 60.8 39 59.0
MCO09G689 Micromonas commoda HOM05D003922 ORTHO05D004492 2.5e-06 56.2 79 34.2


User provided reference genes

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