Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0341771 Helianthus annuus HOM05D005138 ORTHO05D006318 1.1e-69 266.5 132 100.0
Lsat_1_v5_gn_1_116501 Lactuca sativa HOM05D005138 ORTHO05D006318 5.6e-63 244.2 130 90.8
TAR362G0697 Trochodendron aralioides HOM05D005138 ORTHO05D006318 5.1e-56 221.1 133 80.5
Duzib114G0920 Durio zibethinus HOM05D005138 ORTHO05D006318 6.7e-56 220.7 133 82.0
Haze_03004 Corylus avellana HOM05D005138 ORTHO05D006318 8.7e-56 220.3 131 79.4
Dinv44706 Davidia involucrata HOM05D005138 ORTHO05D006318 8.7e-56 220.3 131 80.9
Hma1.2p1_0837F.1_g226140 Hydrangea macrophylla HOM05D005138 ORTHO05D006318 1.5e-55 219.5 133 80.5
Duzib128G1035 Durio zibethinus HOM05D005138 ORTHO05D006318 1.9e-55 219.2 133 80.5
Manes.11G007200 Manihot esculenta HOM05D005138 ORTHO05D006318 2.5e-55 218.8 133 81.2
Manes.04G157100 Manihot esculenta HOM05D005138 ORTHO05D006318 5.6e-55 217.6 133 79.7
Cfa010943 Carpinus fangiana HOM05D005138 ORTHO05D006318 7.4e-55 217.2 131 78.6
CiPaw.14G008900 Carya illinoinensis HOM05D005138 ORTHO05D006318 7.4e-55 217.2 133 80.5
PSO384G1335 Papaver somniferum HOM05D005138 ORTHO05D006318 9.6e-55 216.9 133 78.9
PGR044G2178 Punica granatum HOM05D005138 ORTHO05D006318 1.6e-54 216.1 133 78.9
Eucgr.G03216 Eucalyptus grandis HOM05D005138 ORTHO05D006318 2.1e-54 215.7 133 78.2
PSO135G0826 Papaver somniferum HOM05D005138 ORTHO05D006318 2.8e-54 215.3 133 78.9
Thecc.10G149000 Theobroma cacao HOM05D005138 ORTHO05D006318 2.8e-54 215.3 133 78.9
MD07G1047200 Malus domestica HOM05D005138 ORTHO05D006318 3.7e-54 214.9 133 78.9
DCAR_029715 Daucus carota HOM05D005138 ORTHO05D006318 6.2e-54 214.2 133 78.2
Sed0002262 Sechium edule HOM05D005138 ORTHO05D006318 6.2e-54 214.2 133 77.4
FAN03G2670 Fragaria x ananassa HOM05D005138 ORTHO05D006318 1.1e-53 213.4 133 77.4
FAN06G4838 Fragaria x ananassa HOM05D005138 ORTHO05D006318 1.1e-53 213.4 133 77.4
Gorai.011G218700 Gossypium raimondii HOM05D005138 ORTHO05D006318 1.4e-53 213.0 133 77.4
CiPaw.13G015300 Carya illinoinensis HOM05D005138 ORTHO05D006318 2.4e-53 212.2 131 78.6
Gohir.D10G195900 Gossypium hirsutum HOM05D005138 ORTHO05D006318 3.1e-53 211.8 133 76.7
MD02G1279300 Malus domestica HOM05D005138 ORTHO05D006318 3.1e-53 211.8 133 77.4
FvH4_7g03540 Fragaria vesca HOM05D005138 ORTHO05D006318 4.0e-53 211.5 133 76.7
FAN10G0593 Fragaria x ananassa HOM05D005138 ORTHO05D006318 4.0e-53 211.5 133 77.4
FAN10G2449 Fragaria x ananassa HOM05D005138 ORTHO05D006318 4.0e-53 211.5 133 77.4
Prupe.2G041500 Prunus persica HOM05D005138 ORTHO05D006318 5.3e-53 211.1 133 76.7
RcHm_v2.0_Chr1g0325871 Rosa chinensis HOM05D005138 ORTHO05D006318 6.9e-53 210.7 133 75.9
vmacro10390 Vaccinium macrocarpon HOM05D005138 ORTHO05D006318 9.0e-53 210.3 133 76.7
Gohir.A10G188000 Gossypium hirsutum HOM05D005138 ORTHO05D006318 1.2e-52 209.9 133 75.9
Hund13385 Selenicereus undatus HOM05D005138 ORTHO05D006318 1.5e-52 209.5 125 77.6
Hund15745 Selenicereus undatus HOM05D005138 ORTHO05D006318 1.5e-52 209.5 132 78.0
CDE04G1620 Ceratophyllum demersum HOM05D005138 ORTHO05D006318 2.0e-52 209.1 133 76.7
Actinidia34769 Actinidia chinensis HOM05D005138 ORTHO05D006318 9.9e-52 206.8 132 75.8
THA.LOC104826756 Tarenaya hassleriana HOM05D005138 ORTHO05D006318 9.9e-52 206.8 132 75.0
TWI74G0500 Tripterygium wilfordii HOM05D005138 ORTHO05D006318 1.3e-51 206.5 133 73.7
Cc07_g21240 Coffea canephora HOM05D005138 ORTHO05D006318 2.2e-51 205.7 131 74.8
MELO3C012486.2 Cucumis melo HOM05D005138 ORTHO05D006318 2.2e-51 205.7 141 72.3
Os07g0640100 Oryza sativa ssp. japonica HOM05D005138 ORTHO05D006318 2.2e-51 205.7 131 78.6
Cpa.g.sc169.49 Carica papaya HOM05D005138 ORTHO05D006318 2.9e-51 205.3 133 76.7
Sc10g0004520 Simmondsia chinensis HOM05D005138 ORTHO05D006318 2.9e-51 205.3 129 74.4
CANSAT56G0322 Cannabis sativa HOM05D005138 ORTHO05D006318 4.9e-51 204.5 133 75.9
Atru.chr12.1279 Acer truncatum HOM05D005138 ORTHO05D006318 8.4e-51 203.8 133 74.4
HPP92_021197 Vanilla planifolia HOM05D005138 ORTHO05D006318 1.9e-50 202.6 125 75.2
MBI13_g09225_MAGBIO Magnolia biondii HOM05D005138 ORTHO05D006318 3.2e-50 201.8 133 75.2
Solyc01g022750.3 Solanum lycopersicum HOM05D005138 ORTHO05D006318 4.2e-50 201.4 125 75.2
AUR62032630 Chenopodium quinoa HOM05D005138 ORTHO05D006318 5.5e-50 201.1 132 70.5
CsaV3_5G036890 Cucumis sativus L. HOM05D005138 ORTHO05D006318 5.5e-50 201.1 128 75.8
EL10Ac2g02769 Beta vulgaris HOM05D005138 ORTHO05D000392 7.1e-50 200.7 130 71.5
AUR62031745 Chenopodium quinoa HOM05D005138 ORTHO05D006318 7.1e-50 200.7 132 70.5
Ciclev10002826m.g Citrus clementina HOM05D005138 ORTHO05D006318 1.2e-49 199.9 133 72.2
Sopen01g016660 Solanum pennellii HOM05D005138 ORTHO05D006318 1.6e-49 199.5 124 75.0
Zm00001eb001400 Zea mays HOM05D005138 ORTHO05D006318 1.6e-49 199.5 133 72.2
PGSC0003DMG400004276 Solanum tuberosum HOM05D005138 ORTHO05D006318 2.7e-49 198.7 129 69.8
SGA_v2.0_scaffold43G16284 Striga asiatica HOM05D005138 ORTHO05D006318 2.7e-49 198.7 126 73.8
THA.LOC104799320 Tarenaya hassleriana HOM05D005138 ORTHO05D006318 2.7e-49 198.7 132 75.0
CSS0020361 Camellia sinensis var. sinensis HOM05D005138 ORTHO05D006318 3.5e-49 198.4 126 73.8
arahy.Tifrunner.gnm1.ann1.EVE7SV Arachis hypogaea HOM05D005138 ORTHO05D006318 7.9e-49 197.2 124 72.6
arahy.Tifrunner.gnm1.ann1.K7P4IE Arachis hypogaea HOM05D005138 ORTHO05D006318 7.9e-49 197.2 124 72.6
CAN.G1362.7 Capsicum annuum HOM05D005138 ORTHO05D006318 1.0e-48 196.8 125 72.8
VMungo1127G1184 Vigna mungo HOM05D005138 ORTHO05D006318 1.0e-48 196.8 133 72.2
Nitab4.5_0010402g0010 Nicotiana tabacum HOM05D005138 ORTHO05D006318 1.3e-48 196.4 131 71.0
Aqoxy2G00421 Aquilegia oxysepala HOM05D005138 ORTHO05D006318 1.8e-48 196.1 131 74.8
TWI38G0338 Tripterygium wilfordii HOM05D005138 ORTHO05D006318 1.8e-48 196.1 127 70.1
Aa31LG3G6480 Aethionema arabicum HOM05D005138 ORTHO05D006318 3.0e-48 195.3 127 75.6
QL04p018722 Quercus lobata HOM05D005138 ORTHO05D006318 3.0e-48 195.3 132 71.2
Thhalv10021751m.g Eutrema salsugineum HOM05D005138 ORTHO05D006318 5.1e-48 194.5 127 74.0
SGA_v2.0_scaffold232G43489 Striga asiatica HOM05D005138 ORTHO05D006318 5.1e-48 194.5 126 73.0
Ah.10g030100 Amaranthus hybridus HOM05D005138 ORTHO05D006318 6.7e-48 194.1 132 68.9
ATR1096G082 Amborella trichopoda HOM05D005138 ORTHO05D006318 6.7e-48 194.1 124 71.0
Medtr8g040150 Medicago truncatula HOM05D005138 ORTHO05D006318 6.7e-48 194.1 132 70.5
A03p37550 Brassica napus HOM05D005138 ORTHO05D006318 8.7e-48 193.7 127 73.2
Ah.12g059980 Amaranthus hybridus HOM05D005138 ORTHO05D006318 1.5e-47 193.0 132 70.5
Glyma.15G231900 Glycine max HOM05D005138 ORTHO05D006318 1.5e-47 193.0 126 71.4
Glyma.13G193600 Glycine max HOM05D005138 ORTHO05D006318 2.5e-47 192.2 126 71.4
Psat4g099920 Pisum sativum HOM05D005138 ORTHO05D006318 2.5e-47 192.2 132 68.9
BcaC09g48226 Brassica carinata HOM05D005138 ORTHO05D006318 3.3e-47 191.8 127 72.4
C01p53060 Brassica napus HOM05D005138 ORTHO05D006318 3.3e-47 191.8 127 72.4
C03p45540 Brassica napus HOM05D005138 ORTHO05D006318 3.3e-47 191.8 127 72.4
AT3G12260 Arabidopsis thaliana HOM05D005138 ORTHO05D006318 5.6e-47 191.0 131 71.8
BcaB04g18689 Brassica carinata HOM05D005138 ORTHO05D006318 7.4e-47 190.7 127 71.7
CARHR086810 Cardamine hirsuta HOM05D005138 ORTHO05D006318 7.4e-47 190.7 127 72.4
Sp3g10480 Schrenkiella parvula HOM05D005138 ORTHO05D006318 7.4e-47 190.7 127 72.4
AL3G23920 Arabidopsis lyrata HOM05D005138 ORTHO05D006318 1.3e-46 189.9 127 71.7
Glyma.09G091002 Glycine max HOM05D005138 ORTHO05D006318 1.6e-46 189.5 126 70.6
Carub.0003s1162 Capsella rubella HOM05D005138 ORTHO05D006318 2.1e-46 189.1 127 70.9
Phvul.011G203300 Phaseolus vulgaris HOM05D005138 ORTHO05D006318 2.1e-46 189.1 133 69.2
ECA248G2587 Erigeron canadensis HOM05D005138 ORTHO05D006318 3.7e-46 188.3 103 89.3
Nitab4.5_0004389g0010 Nicotiana tabacum HOM05D005138 ORTHO05D006318 3.7e-46 188.3 158 59.5
Migut.N01855 Erythranthe guttata HOM05D005138 ORTHO05D006318 6.2e-46 187.6 126 72.2
TPR.G8538 Trifolium pratense HOM05D005138 ORTHO05D006318 8.2e-46 187.2 132 66.7
unitig_899.g15579 Utricularia gibba HOM05D005138 ORTHO05D006318 8.2e-46 187.2 126 73.8
Lj3g0022103 Lotus japonicus HOM05D005138 ORTHO05D006318 1.1e-45 186.8 127 67.7
Lalb_Chr03g0032141 Lupinus albus HOM05D005138 ORTHO05D006318 1.1e-45 186.8 127 67.7
Aqoxy2G00420 Aquilegia oxysepala HOM05D000001 ORTHO05D007291 1.4e-45 186.4 125 75.2
Ca_23972_v3 Cicer arietinum L. HOM05D005138 ORTHO05D006318 1.4e-45 186.4 132 65.9
BolC3t16831H Brassica oleracea HOM05D005138 ORTHO05D006318 5.3e-45 184.5 136 67.6
BraA03t12909Z Brassica rapa HOM05D005138 ORTHO05D006318 9.0e-45 183.7 137 67.2
C05p55530 Brassica napus HOM05D005138 ORTHO05D006318 1.5e-44 183.0 136 66.2
BolC1t05249H Brassica oleracea HOM05D005138 ORTHO05D006318 2.0e-44 182.6 140 65.7
BolC5t34219H Brassica oleracea HOM05D005138 ORTHO05D006318 2.6e-44 182.2 136 66.2
A05p37100 Brassica napus HOM05D005138 ORTHO05D006318 1.0e-43 180.3 134 65.7
BraA05t22507Z Brassica rapa HOM05D005138 ORTHO05D006318 1.0e-43 180.3 134 65.7
Sabra01G0021400 Salix brachista HOM05D005138 ORTHO05D006318 4.9e-43 177.9 132 66.7
Potri.001G029900 Populus trichocarpa HOM05D005138 ORTHO05D006318 6.5e-43 177.6 132 65.9
Peaxi162Scf00062g02216 Petunia axillaris HOM05D005138 ORTHO05D006318 3.2e-42 175.3 133 65.4
MSTRG.5074 Avicennia marina HOM05D005138 ORTHO05D006318 6.0e-41 171.0 126 66.7
SalBow5G1163 Salvia bowleyana HOM05D005138 ORTHO05D006318 1.0e-40 170.2 165 53.3
Nitab4.5_0000254g0180 Nicotiana tabacum HOM05D005138 ORTHO05D006318 1.3e-40 169.9 131 64.9
Mapoly0055s0110 Marchantia polymorpha HOM05D005138 ORTHO05D006318 1.7e-35 152.9 123 58.5
Actinidia38920 Actinidia chinensis HOM05D005138 ORTHO05D006318 6.5e-35 151.0 130 60.8
Peaxi162Scf01042g00115 Petunia axillaris HOM05D005138 ORTHO05D006318 1.9e-34 149.4 124 58.9
PGSC0003DMG400005271 Solanum tuberosum HOM05D005138 ORTHO05D006318 5.5e-34 147.9 93 73.1
Pp3c1_37620 Physcomitrium patens HOM05D005138 ORTHO05D006318 3.6e-33 145.2 125 56.8
Pp3c2_3180 Physcomitrium patens HOM05D005138 ORTHO05D006318 6.1e-33 144.4 125 56.8
GSVIVG01036643001 Vitis vinifera HOM05D005138 ORTHO05D006318 1.8e-32 142.9 95 70.5
CBR_g52457 Chara braunii HOM05D005138 ORTHO05D006318 3.0e-32 142.1 135 53.3
COL.COLO4_20706 Corchorus olitorius HOM05D005138 ORTHO05D006318 2.3e-24 115.9 71 81.7
Lj2A602G38 Lonicera japonica HOM05D005138 ORTHO05D006318 1.1e-23 113.6 71 77.5
ClCG05G026950 Citrullus lanatus HOM05D005138 ORTHO05D006318 4.4e-23 111.7 76 71.1
ClCG00G004230 Citrullus lanatus HOM05D005138 ORTHO05D006318 5.7e-23 111.3 62 82.3
ClCG05G026940 Citrullus lanatus HOM05D005138 ORTHO05D006318 5.7e-23 111.3 62 82.3
Gorai.004G120800 Gossypium raimondii HOM05D005138 ORTHO05D006318 5.7e-23 111.3 75 72.0
Rhsim09G0131900 Rhododendron simsii HOM05D005138 ORTHO05D006318 1.7e-22 109.8 72 73.6
Gohir.A10G188200 Gossypium hirsutum HOM05D005138 ORTHO05D006318 4.8e-22 108.2 75 70.7
Lalb_Chr19g0132971 Lupinus albus HOM05D005138 ORTHO05D006318 6.3e-22 107.8 70 70.0
CAN.G575.4 Capsicum annuum HOM05D005138 ORTHO05D006318 3.1e-21 105.5 73 64.4
MD07G1046900 Malus domestica HOM05D005138 ORTHO05D006318 3.1e-21 105.5 62 77.4
RcHm_v2.0_Chr1g0325941 Rosa chinensis HOM05D005138 ORTHO05D006318 3.1e-21 105.5 69 71.0
COL.COLO4_20705 Corchorus olitorius HOM05D005138 ORTHO05D006318 4.1e-21 105.1 62 77.4
Nn7g36804 Nelumbo nucifera HOM05D005138 ORTHO05D006318 5.3e-21 104.8 65 75.4
PGSC0003DMG401025557 Solanum tuberosum HOM05D005138 ORTHO05D006318 6.9e-21 104.4 65 70.8
BcaC01g04057 Brassica carinata HOM05D005138 ORTHO05D006318 1.2e-20 103.6 66 72.7
Gohir.D03G123000 Gossypium hirsutum HOM05D005138 ORTHO05D006318 1.2e-20 103.6 71 71.8
SMO364G0517 Selaginella moellendorffii HOM05D005138 ORTHO05D006318 1.7e-19 99.8 118 41.5
Lalb_Chr19g0132981 Lupinus albus HOM05D005138 ORTHO05D006318 4.4e-15 85.1 64 64.1
Atru.chr10.1194 Acer truncatum HOM05D005527 ORTHO05D006480 2.2e-14 82.8 77 55.8
Oeu064133.1 Olea europaea HOM05D005138 ORTHO05D006318 2.8e-14 82.4 56 66.1
MCO10G366 Micromonas commoda HOM05D005138 ORTHO05D006318 1.6e-12 76.6 116 37.1
AUR62042115 Chenopodium quinoa HOM05D005138 ORTHO05D006318 2.6e-12 75.9 53 67.9
SEGI_36145 Sequoiadendron giganteum HOM05D005138 ORTHO05D006318 1.0e-11 73.9 62 50.0
VMungo0464G2031 Vigna mungo HOM05D005138 ORTHO05D011906 2.1e-09 66.2 58 56.9
Cre12.g555250 Chlamydomonas reinhardtii HOM05D005138 ORTHO05D006318 3.0e-08 62.4 111 28.8
SEGI_02182 Sequoiadendron giganteum HOM05D005138 ORTHO05D006318 6.7e-08 61.2 74 37.8
PGSC0003DMG400003395 Solanum tuberosum HOM05D005138 ORTHO05D006318 8.8e-08 60.8 49 53.1
PRCOL_00003180 Prasinoderma coloniale HOM05D000737 ORTHO05D000581 1.3e-06 57.0 76 31.6


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