Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0341541 Helianthus annuus HOM05D004975 ORTHO05D005963 2.7e-112 408.7 207 100.0
HanXRQChr01g0029381 Helianthus annuus HOM05D004975 ORTHO05D005963 3.0e-111 405.2 207 98.6
ECA248G0122 Erigeron canadensis HOM05D004975 ORTHO05D005963 1.4e-97 359.8 207 87.9
Lsat_1_v5_gn_1_49060 Lactuca sativa HOM05D004975 ORTHO05D005963 1.6e-96 356.3 202 88.1
ECA248G2823 Erigeron canadensis HOM05D004975 ORTHO05D005963 1.1e-94 350.1 207 87.0
CSS0002597 Camellia sinensis var. sinensis HOM05D004975 ORTHO05D005963 7.4e-86 320.9 212 77.8
Dinv30242 Davidia involucrata HOM05D004975 ORTHO05D005963 2.8e-85 318.9 217 75.6
Hma1.2p1_0140F.1_g063690 Hydrangea macrophylla HOM05D004975 ORTHO05D005963 2.6e-83 312.4 217 71.9
Actinidia13302 Actinidia chinensis HOM05D004975 ORTHO05D005963 5.5e-81 304.7 207 74.9
Cc08_g08560 Coffea canephora HOM05D004975 ORTHO05D005963 2.7e-80 302.4 200 73.5
Actinidia13417 Actinidia chinensis HOM05D004975 ORTHO05D005963 4.7e-80 301.6 214 73.4
Potri.018G006900 Populus trichocarpa HOM05D004975 ORTHO05D005963 4.7e-80 301.6 193 75.6
MSTRG.11721 Avicennia marina HOM05D004975 ORTHO05D005963 3.9e-79 298.5 220 68.6
Nitab4.5_0000250g0160 Nicotiana tabacum HOM05D004975 ORTHO05D005963 6.7e-79 297.7 213 70.4
Solyc08g065760.3 Solanum lycopersicum HOM05D004975 ORTHO05D005963 6.7e-79 297.7 213 71.8
Sopen10g033590 Solanum pennellii HOM05D004975 ORTHO05D005963 6.7e-79 297.7 213 71.8
Ciclev10009422m.g Citrus clementina HOM05D004975 ORTHO05D005963 4.4e-78 295.0 200 72.0
PGSC0003DMG400013829 Solanum tuberosum HOM05D004975 ORTHO05D005963 4.4e-78 295.0 213 70.9
Peaxi162Scf00105g00510 Petunia axillaris HOM05D004975 ORTHO05D005963 9.7e-78 293.9 213 70.0
Gorai.001G069100 Gossypium raimondii HOM05D004975 ORTHO05D005963 1.3e-77 293.5 214 71.0
SGA_v2.0_scaffold229G43318 Striga asiatica HOM05D004975 ORTHO05D005963 1.7e-77 293.1 195 73.8
CiPaw.08G019900 Carya illinoinensis HOM05D004975 ORTHO05D005963 2.2e-77 292.7 222 67.1
Nitab4.5_0002393g0070 Nicotiana tabacum HOM05D004975 ORTHO05D005963 2.2e-77 292.7 208 69.7
CiPaw.01G062200 Carya illinoinensis HOM05D004975 ORTHO05D005963 3.7e-77 292.0 222 67.1
Gohir.A07G060900 Gossypium hirsutum HOM05D004975 ORTHO05D005963 3.7e-77 292.0 214 71.0
DCAR_007697 Daucus carota HOM05D004975 ORTHO05D005963 6.3e-77 291.2 210 70.0
Duzib187G1289 Durio zibethinus HOM05D004975 ORTHO05D005963 6.3e-77 291.2 218 68.3
CsaV3_3G001030 Cucumis sativus L. HOM05D004975 ORTHO05D005963 1.1e-76 290.4 197 73.1
TAR383G0773 Trochodendron aralioides HOM05D004975 ORTHO05D005963 1.1e-76 290.4 200 74.0
TAR625G0147 Trochodendron aralioides HOM05D004975 ORTHO05D005963 1.4e-76 290.0 200 74.0
SGA_v2.0_scaffold27G11528 Striga asiatica HOM05D004975 ORTHO05D005963 1.8e-76 289.7 213 69.5
Thecc.09G007400 Theobroma cacao HOM05D004975 ORTHO05D005963 2.4e-76 289.3 197 73.1
COL.COLO4_19031 Corchorus olitorius HOM05D004975 ORTHO05D005963 5.3e-76 288.1 221 67.4
Sc24g0001980 Simmondsia chinensis HOM05D004975 ORTHO05D005963 5.3e-76 288.1 220 68.6
Cpa.g.sc6.221 Carica papaya HOM05D004975 ORTHO05D005963 9.1e-76 287.3 222 68.0
Gohir.D07G065600 Gossypium hirsutum HOM05D004975 ORTHO05D005963 1.5e-75 286.6 214 70.6
QL12p025158 Quercus lobata HOM05D004975 ORTHO05D005963 2.0e-75 286.2 200 71.0
MELO3C013792.2 Cucumis melo HOM05D004975 ORTHO05D005963 5.9e-75 284.6 201 71.6
ClCG10G000990 Citrullus lanatus HOM05D004975 ORTHO05D005963 2.9e-74 282.3 190 74.2
CANSAT25G3538 Cannabis sativa HOM05D004975 ORTHO05D005963 5.0e-74 281.6 200 70.0
CANSAT64G0033 Cannabis sativa HOM05D004975 ORTHO05D005963 8.5e-74 280.8 200 70.0
Eucgr.H01931 Eucalyptus grandis HOM05D004975 ORTHO05D005963 8.5e-74 280.8 200 70.0
Duzib168G2230 Durio zibethinus HOM05D004975 ORTHO05D005963 1.9e-73 279.6 219 66.2
PGR044G1665 Punica granatum HOM05D004975 ORTHO05D005963 2.5e-73 279.3 209 67.5
TAR383G0873 Trochodendron aralioides HOM05D004975 ORTHO05D005963 2.5e-73 279.3 178 79.2
TWI63G0658 Tripterygium wilfordii HOM05D004975 ORTHO05D005963 3.2e-73 278.9 211 67.8
Migut.A00251 Erythranthe guttata HOM05D004975 ORTHO05D005963 4.2e-73 278.5 192 69.3
Atru.chr7.2646 Acer truncatum HOM05D004975 ORTHO05D005963 5.5e-73 278.1 191 70.2
EL10Ac2g04836 Beta vulgaris HOM05D004975 ORTHO05D005963 9.4e-73 277.3 211 67.3
TWI34G1428 Tripterygium wilfordii HOM05D004975 ORTHO05D005963 2.1e-72 276.2 208 66.8
Manes.17G086700 Manihot esculenta HOM05D004975 ORTHO05D005963 3.6e-72 275.4 189 72.0
Sopen08g019440 Solanum pennellii HOM05D004975 ORTHO05D005963 3.6e-72 275.4 179 75.4
GSVIVG01009932001 Vitis vinifera HOM05D004975 ORTHO05D005963 6.1e-72 274.6 193 72.0
Hund22233 Selenicereus undatus HOM05D004975 ORTHO05D005963 8.0e-72 274.2 215 65.6
Hund06848 Selenicereus undatus HOM05D004975 ORTHO05D005963 1.8e-71 273.1 187 73.8
unitig_46.g18530 Utricularia gibba HOM05D004975 ORTHO05D005963 1.8e-71 273.1 179 72.6
Psat6g036480 Pisum sativum HOM05D004975 ORTHO05D005963 5.2e-71 271.6 197 68.0
Sed0019969 Sechium edule HOM05D004975 ORTHO05D005963 5.2e-71 271.6 211 64.0
Ah.06g191340 Amaranthus hybridus HOM05D004975 ORTHO05D005963 6.7e-71 271.2 215 65.6
MBI16_g41808_MAGBIO Magnolia biondii HOM05D004975 ORTHO05D005963 1.1e-70 270.4 195 71.3
THA.LOC104803875 Tarenaya hassleriana HOM05D004975 ORTHO05D005963 1.5e-70 270.0 216 63.4
ATR0580G184 Amborella trichopoda HOM05D004975 ORTHO05D005963 2.0e-70 269.6 195 71.3
arahy.Tifrunner.gnm1.ann1.KS8K1P Arachis hypogaea HOM05D004975 ORTHO05D005963 4.4e-70 268.5 205 65.4
Medtr1g007480 Medicago truncatula HOM05D004975 ORTHO05D005963 9.7e-70 267.3 195 67.2
arahy.Tifrunner.gnm1.ann1.1NF0KF Arachis hypogaea HOM05D004975 ORTHO05D005963 1.3e-69 266.9 205 64.9
TPR.G24523 Trifolium pratense HOM05D004975 ORTHO05D005963 2.8e-69 265.8 206 65.5
Lj3g0002799 Lotus japonicus HOM05D004975 ORTHO05D005963 8.2e-69 264.2 207 64.3
Lj3g0015990 Lotus japonicus HOM05D004975 ORTHO05D005963 1.1e-68 263.8 207 64.3
Sabra18G0014600 Salix brachista HOM05D004975 ORTHO05D005963 1.8e-68 263.1 283 51.6
Rhsim04G0150100 Rhododendron simsii HOM05D004975 ORTHO05D005963 2.4e-68 262.7 207 67.6
Ca_12771_v3 Cicer arietinum L. HOM05D004975 ORTHO05D005963 1.6e-67 260.0 194 64.9
Lalb_Chr18g0045061 Lupinus albus HOM05D004975 ORTHO05D005963 1.6e-67 260.0 205 63.4
arahy.Tifrunner.gnm1.ann1.GL41SS Arachis hypogaea HOM05D004975 ORTHO05D005963 4.5e-67 258.5 205 62.4
Glyma.12G071700 Glycine max HOM05D004975 ORTHO05D005963 4.5e-67 258.5 195 65.6
Phvul.011G072600 Phaseolus vulgaris HOM05D004975 ORTHO05D005963 4.5e-67 258.5 196 65.8
Aqoxy7G00181 Aquilegia oxysepala HOM05D004975 ORTHO05D005963 1.0e-66 257.3 189 67.2
VMungo1127G2243 Vigna mungo HOM05D004975 ORTHO05D005963 1.0e-66 257.3 178 70.8
Aa31LG2G18860 Aethionema arabicum HOM05D004975 ORTHO05D005963 1.7e-66 256.5 209 65.6
Glyma.11G153169 Glycine max HOM05D004975 ORTHO05D005963 1.7e-66 256.5 195 64.6
AL7G20600 Arabidopsis lyrata HOM05D004975 ORTHO05D005963 2.2e-66 256.1 203 64.0
CARHR239350 Cardamine hirsuta HOM05D004975 ORTHO05D005963 2.2e-66 256.1 179 69.3
RcHm_v2.0_Chr6g0305011 Rosa chinensis HOM05D004975 ORTHO05D005963 6.5e-66 254.6 227 60.8
CDE05G0021 Ceratophyllum demersum HOM05D004975 ORTHO05D005963 8.5e-66 254.2 207 62.3
FvH4_2g36661 Fragaria vesca HOM05D004975 ORTHO05D005963 8.5e-66 254.2 227 59.9
EL10Ac4g08846 Beta vulgaris HOM05D004975 ORTHO05D005963 1.1e-65 253.8 196 65.3
AT4G31460 Arabidopsis thaliana HOM05D004975 ORTHO05D005963 7.2e-65 251.1 175 70.9
FAN20G1154 Fragaria x ananassa HOM05D007251 ORTHO05D009266 7.2e-65 251.1 227 59.5
CDE02G4585 Ceratophyllum demersum HOM05D004975 ORTHO05D005963 9.4e-65 250.8 174 70.1
Zm00001eb323470 Zea mays HOM05D004975 ORTHO05D005963 3.6e-64 248.8 204 61.3
A01p06810 Brassica napus HOM05D004975 ORTHO05D005963 1.8e-63 246.5 170 71.8
BraA01t00633Z Brassica rapa HOM05D004975 ORTHO05D005963 1.8e-63 246.5 170 71.8
BraA08t33823Z Brassica rapa HOM05D004975 ORTHO05D005963 3.0e-63 245.7 170 71.2
Os07g0544900 Oryza sativa ssp. japonica HOM05D004975 ORTHO05D005963 3.0e-63 245.7 175 69.7
BcaB03g12697 Brassica carinata HOM05D004975 ORTHO05D005963 4.0e-63 245.4 170 71.2
C01p07550 Brassica napus HOM05D004975 ORTHO05D005963 4.0e-63 245.4 170 71.2
BolC1t00736H Brassica oleracea HOM05D004975 ORTHO05D005963 4.0e-63 245.4 170 71.2
Thhalv10026230m.g Eutrema salsugineum HOM05D004975 ORTHO05D005963 4.0e-63 245.4 205 62.0
A08p18600 Brassica napus HOM05D004975 ORTHO05D005963 6.7e-63 244.6 169 71.0
BcaC09g51928 Brassica carinata HOM05D004975 ORTHO05D005963 8.8e-63 244.2 170 70.6
Sp7g29320 Schrenkiella parvula HOM05D004975 ORTHO05D005963 1.2e-62 243.8 170 70.6
BcaNung04586 Brassica carinata HOM05D004975 ORTHO05D005963 1.5e-62 243.4 169 70.4
Carub.0007s0909 Capsella rubella HOM05D004975 ORTHO05D005963 1.5e-62 243.4 170 69.4
BcaC01g01087 Brassica carinata HOM05D004975 ORTHO05D005963 2.6e-62 242.7 170 70.6
C03p87960 Brassica napus HOM05D004975 ORTHO05D005963 2.6e-62 242.7 170 70.6
BolC3t21107H Brassica oleracea HOM05D004975 ORTHO05D005963 2.6e-62 242.7 170 70.6
HPP92_011116 Vanilla planifolia HOM05D004975 ORTHO05D005963 5.7e-62 241.5 175 68.0
arahy.Tifrunner.gnm1.ann1.57HDZK Arachis hypogaea HOM05D004975 ORTHO05D005963 1.3e-61 240.4 205 61.0
SHI04272 Sapria himalayana HOM05D004975 ORTHO05D005963 2.2e-61 239.6 216 56.9
MD08G1128100 Malus domestica HOM05D004975 ORTHO05D005963 1.2e-59 233.8 240 53.8
Prupe.1G459900 Prunus persica HOM05D004975 ORTHO05D005963 1.2e-59 233.8 241 53.5
Zm00001eb106440 Zea mays HOM05D004975 ORTHO05D005963 4.5e-59 231.9 175 64.6
MD15G1107600 Malus domestica HOM05D004975 ORTHO05D005963 3.8e-58 228.8 240 52.9
Haze_21744 Corylus avellana HOM05D004975 ORTHO05D005963 2.3e-55 219.5 286 44.1
PSO063G2087 Papaver somniferum HOM05D004975 ORTHO05D005963 1.2e-54 217.2 218 56.4
PSO170G1562 Papaver somniferum HOM05D004975 ORTHO05D005963 1.5e-54 216.9 218 56.4
PSO063G4606 Papaver somniferum HOM05D004975 ORTHO05D005963 2.6e-54 216.1 204 56.9
FAN06G0478 Fragaria x ananassa HOM05D004975 ORTHO05D005963 3.7e-53 212.2 189 58.7
Lj7C709T7 Lonicera japonica HOM05D004975 ORTHO05D005963 8.3e-53 211.1 147 70.7
SEGI_29047 Sequoiadendron giganteum HOM05D004975 ORTHO05D005963 5.4e-52 208.4 167 61.7
PSO782G1312 Papaver somniferum HOM05D004975 ORTHO05D005963 3.8e-50 202.2 141 69.5
FvH4_7g03740 Fragaria vesca HOM05D004975 ORTHO05D005963 1.9e-49 199.9 135 70.4
CAN.G886.9 Capsicum annuum HOM05D004975 ORTHO05D005963 2.8e-48 196.1 148 66.9
Manes.15G137600 Manihot esculenta HOM05D004975 ORTHO05D005963 3.6e-48 195.7 192 54.7
Oeu031567.1 Olea europaea HOM05D004975 ORTHO05D005963 1.2e-46 190.7 151 62.9
Nn2g12690 Nelumbo nucifera HOM05D004975 ORTHO05D005963 1.3e-45 187.2 134 70.1
AUR62027460 Chenopodium quinoa HOM05D004975 ORTHO05D005963 2.4e-44 183.0 151 62.9
Ca_29761_v3 Cicer arietinum L. HOM05D004975 ORTHO05D005963 2.3e-42 176.4 131 64.1
vmacro05353 Vaccinium macrocarpon HOM05D004975 ORTHO05D005963 1.1e-41 174.1 137 65.7
HPP92_011121 Vanilla planifolia HOM05D004975 ORTHO05D005963 6.1e-40 168.3 126 69.8
Cfa013273 Carpinus fangiana HOM05D004975 ORTHO05D005963 3.0e-39 166.0 145 58.6
AagrBONN_evm.TU.Sc2ySwM_117.1642 Anthoceros agrestis HOM05D004975 ORTHO05D005963 4.0e-39 165.6 131 62.6
Solyc10g038060.2 Solanum lycopersicum HOM05D004975 ORTHO05D005963 5.8e-38 161.8 173 53.8
Mapoly0026s0002 Marchantia polymorpha HOM05D004975 ORTHO05D005963 9.2e-36 154.5 114 61.4
Pp3c2_35700 Physcomitrium patens HOM05D004975 ORTHO05D005963 2.3e-34 149.8 108 63.9
SMO367G1088 Selaginella moellendorffii HOM05D004975 ORTHO05D005963 1.9e-33 146.7 113 61.9
BcaC01g01097 Brassica carinata HOM05D004975 ORTHO05D005963 1.1e-28 131.0 94 68.1
C03p88060 Brassica napus HOM05D004975 ORTHO05D005963 1.9e-28 130.2 92 68.5
BcaNung01521 Brassica carinata HOM05D004975 ORTHO05D005963 9.2e-28 127.9 115 60.0
BcaNung04139 Brassica carinata HOM05D004975 ORTHO05D005963 9.2e-28 127.9 115 60.0
Aqoxy3G03669 Aquilegia oxysepala HOM05D004975 ORTHO05D005963 3.2e-20 102.8 89 60.7
AUR62027459 Chenopodium quinoa HOM05D004975 ORTHO05D005963 5.6e-17 92.0 67 67.2
Oeu033208.1 Olea europaea HOM05D004975 ORTHO05D005963 5.6e-17 92.0 99 50.5
BcaB03g12699 Brassica carinata HOM05D004975 ORTHO05D005963 1.4e-15 87.4 87 51.7
PRCOL_00000323 Prasinoderma coloniale HOM05D004975 ORTHO05D005963 1.8e-15 87.0 101 42.6
Sopen10g011390 Solanum pennellii HOM05D004975 ORTHO05D005963 2.0e-14 83.6 59 67.8
Cfa025056 Carpinus fangiana HOM05D004975 ORTHO05D005963 1.7e-13 80.5 78 50.0
CBR_g8145 Chara braunii HOM05D004975 ORTHO05D005963 7.1e-12 75.1 54 63.0
AagrBONN_evm.TU.Sc2ySwM_368.1480 Anthoceros agrestis HOM05D001654 ORTHO05D002773 1.9e-09 67.0 45 62.2
CiPaw.07G212300 Carya illinoinensis HOM05D004975 ORTHO05D005963 7.3e-09 65.1 48 64.6


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