Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0341301 Helianthus annuus HOM05D005878 ORTHO05D007433 2.4e-113 412.5 271 100.0
ECA248G2695 Erigeron canadensis HOM05D005878 ORTHO05D007433 2.6e-75 286.2 205 73.7
Lsat_1_v5_gn_9_74980 Lactuca sativa HOM05D005878 ORTHO05D007433 2.1e-72 276.6 184 79.3
Dinv02557 Davidia involucrata HOM05D005878 ORTHO05D007433 7.5e-62 241.5 204 65.2
Nitab4.5_0002838g0030 Nicotiana tabacum HOM05D005878 ORTHO05D007433 6.3e-61 238.4 199 66.3
Peaxi162Scf00220g00235 Petunia axillaris HOM05D005878 ORTHO05D007433 8.3e-61 238.0 205 66.3
Nitab4.5_0004168g0090 Nicotiana tabacum HOM05D005878 ORTHO05D007433 3.1e-60 236.1 220 63.2
PGSC0003DMG400003288 Solanum tuberosum HOM05D005878 ORTHO05D007433 7.0e-60 235.0 215 63.3
Solyc01g096660.3 Solanum lycopersicum HOM05D005878 ORTHO05D007433 1.6e-59 233.8 215 64.7
Ciclev10002378m.g Citrus clementina HOM05D005878 ORTHO05D007433 2.0e-59 233.4 210 60.5
Sopen01g040380 Solanum pennellii HOM05D005878 ORTHO05D007433 4.5e-59 232.3 215 63.7
CiPaw.14G010200 Carya illinoinensis HOM05D005878 ORTHO05D007433 1.7e-58 230.3 209 59.3
COL.COLO4_05616 Corchorus olitorius HOM05D005878 ORTHO05D007433 2.3e-58 229.9 217 58.5
TWI38G1150 Tripterygium wilfordii HOM05D005878 ORTHO05D007433 3.8e-58 229.2 209 60.8
EL10Ac2g02748 Beta vulgaris HOM05D005878 ORTHO05D007433 6.6e-58 228.4 200 60.0
Prupe.2G044200 Prunus persica HOM05D005878 ORTHO05D007433 8.6e-58 228.0 208 61.5
GSVIVG01036595001 Vitis vinifera HOM05D005878 ORTHO05D007433 8.6e-58 228.0 194 67.5
Cfa010961 Carpinus fangiana HOM05D005878 ORTHO05D007433 1.1e-57 227.6 205 59.5
Eucgr.G03205 Eucalyptus grandis HOM05D005878 ORTHO05D007433 1.5e-57 227.3 206 60.2
arahy.Tifrunner.gnm1.ann1.7Y8XE1 Arachis hypogaea HOM05D005878 ORTHO05D007433 1.9e-57 226.9 203 61.6
Dinv32002 Davidia involucrata HOM05D005878 ORTHO05D007433 1.9e-57 226.9 216 60.2
PGR031G0581 Punica granatum HOM05D005878 ORTHO05D007433 1.9e-57 226.9 219 58.4
Lalb_Chr01g0007451 Lupinus albus HOM05D005878 ORTHO05D007433 3.3e-57 226.1 203 61.6
Hund13399 Selenicereus undatus HOM05D005878 ORTHO05D007433 3.3e-57 226.1 203 63.1
Gohir.A05G398900 Gossypium hirsutum HOM05D005878 ORTHO05D007433 4.2e-57 225.7 217 57.6
QL04p021553 Quercus lobata HOM05D005878 ORTHO05D007433 4.2e-57 225.7 206 59.2
Gorai.012G019700 Gossypium raimondii HOM05D005878 ORTHO05D007433 7.2e-57 224.9 217 57.6
Aqoxy2G00498 Aquilegia oxysepala HOM05D005878 ORTHO05D007433 1.2e-56 224.2 208 58.7
arahy.Tifrunner.gnm1.ann1.RJ91AH Arachis hypogaea HOM05D005878 ORTHO05D007433 1.2e-56 224.2 212 60.4
Gohir.D04G017000 Gossypium hirsutum HOM05D005878 ORTHO05D007433 1.2e-56 224.2 217 57.1
Nn7g36933 Nelumbo nucifera HOM05D005878 ORTHO05D007433 1.2e-56 224.2 214 61.2
Manes.11G008200 Manihot esculenta HOM05D005878 ORTHO05D007433 1.6e-56 223.8 208 60.1
Glyma.06G309000 Glycine max HOM05D005878 ORTHO05D007433 2.8e-56 223.0 202 64.9
TWI15G0528 Tripterygium wilfordii HOM05D005878 ORTHO05D007433 2.8e-56 223.0 231 53.7
Cc00_g09800 Coffea canephora HOM05D005878 ORTHO05D007433 3.6e-56 222.6 215 60.5
CANSAT01G2833 Cannabis sativa HOM05D005878 ORTHO05D007433 4.7e-56 222.2 214 59.8
Thecc.10G140600 Theobroma cacao HOM05D005878 ORTHO05D007433 4.7e-56 222.2 211 56.4
MSTRG.16973 Avicennia marina HOM05D005878 ORTHO05D007433 6.1e-56 221.9 207 61.8
ClCG05G027000 Citrullus lanatus HOM05D005878 ORTHO05D007433 1.0e-55 221.1 206 60.2
RcHm_v2.0_Chr1g0327631 Rosa chinensis HOM05D005878 ORTHO05D007433 1.4e-55 220.7 209 61.7
Actinidia01690 Actinidia chinensis HOM05D005878 ORTHO05D007433 2.3e-55 219.9 212 60.8
TAR636G2836 Trochodendron aralioides HOM05D005878 ORTHO05D007433 2.3e-55 219.9 214 57.0
SalBow2G2419 Salvia bowleyana HOM05D005878 ORTHO05D007433 3.0e-55 219.5 213 59.6
FAN01G0732 Fragaria x ananassa HOM05D005878 ORTHO05D007433 4.0e-55 219.2 212 62.7
Glyma.04G132400 Glycine max HOM05D005878 ORTHO05D007433 4.0e-55 219.2 211 63.0
MELO3C012494.2 Cucumis melo HOM05D005878 ORTHO05D007433 5.2e-55 218.8 206 60.2
Phvul.005G018300 Phaseolus vulgaris HOM05D005878 ORTHO05D007433 5.2e-55 218.8 212 60.4
TAR633G2731 Trochodendron aralioides HOM05D005878 ORTHO05D007433 5.2e-55 218.8 210 60.5
Lj3g0011478 Lotus japonicus HOM05D005878 ORTHO05D007433 6.8e-55 218.4 217 58.5
AUR62032609 Chenopodium quinoa HOM05D005878 ORTHO05D007433 8.9e-55 218.0 186 59.7
Duzib114G0830 Durio zibethinus HOM05D005878 ORTHO05D007433 8.9e-55 218.0 210 58.1
SalBow2G0433 Salvia bowleyana HOM05D005878 ORTHO05D007433 1.5e-54 217.2 213 59.2
VMungo1080G0593 Vigna mungo HOM05D005878 ORTHO05D007433 1.5e-54 217.2 202 61.9
Migut.B01182 Erythranthe guttata HOM05D005878 ORTHO05D007433 2.0e-54 216.9 200 60.0
Oeu006783.1 Olea europaea HOM05D005878 ORTHO05D007433 2.0e-54 216.9 201 62.2
CsaV3_5G036960 Cucumis sativus L. HOM05D005878 ORTHO05D007433 3.4e-54 216.1 206 58.3
MBI03_g46805_MAGBIO Magnolia biondii HOM05D005878 ORTHO05D007433 4.4e-54 215.7 204 60.3
Haze_02979 Corylus avellana HOM05D005878 ORTHO05D007433 7.5e-54 214.9 223 54.3
MBI03_g45113_MAGBIO Magnolia biondii HOM05D005878 ORTHO05D007433 7.5e-54 214.9 204 60.3
Rhsim10G0180100 Rhododendron simsii HOM05D005878 ORTHO05D007433 7.5e-54 214.9 185 65.4
BcaB05g21633 Brassica carinata HOM05D005878 ORTHO05D007433 1.7e-53 213.8 166 70.5
Ca_14245_v3 Cicer arietinum L. HOM05D005878 ORTHO05D007433 1.7e-53 213.8 166 72.3
BcaC06g32524 Brassica carinata HOM05D005878 ORTHO05D007433 2.2e-53 213.4 166 69.3
Actinidia01520 Actinidia chinensis HOM05D005878 ORTHO05D007433 3.7e-53 212.6 214 60.3
BraA10t44928Z Brassica rapa HOM05D005878 ORTHO05D007433 6.3e-53 211.8 176 67.6
FAN06G2676 Fragaria x ananassa HOM05D005878 ORTHO05D007433 6.3e-53 211.8 215 59.1
THA.LOC104799332 Tarenaya hassleriana HOM05D005878 ORTHO05D007433 6.3e-53 211.8 212 59.9
A10p28810 Brassica napus HOM05D005878 ORTHO05D007433 8.3e-53 211.5 176 68.2
MD00G1152600 Malus domestica HOM05D005878 ORTHO05D007433 8.3e-53 211.5 207 61.4
MD07G1043600 Malus domestica HOM05D005878 ORTHO05D007433 8.3e-53 211.5 206 59.2
PSO339G1146 Papaver somniferum HOM05D005878 ORTHO05D007433 8.3e-53 211.5 214 55.1
BcaNung04204 Brassica carinata HOM05D005878 ORTHO05D007433 1.4e-52 210.7 166 68.7
C09p69150 Brassica napus HOM05D005878 ORTHO05D007433 1.4e-52 210.7 166 68.7
BolC9t59659H Brassica oleracea HOM05D005878 ORTHO05D007433 1.4e-52 210.7 166 68.7
DCAR_006594 Daucus carota HOM05D005878 ORTHO05D007433 1.4e-52 210.7 219 57.5
Potri.003G192800 Populus trichocarpa HOM05D005878 ORTHO05D007433 3.1e-52 209.5 209 61.7
BcaB05g21635 Brassica carinata HOM05D005878 ORTHO05D007433 4.1e-52 209.1 164 68.3
BcaC03g13174 Brassica carinata HOM05D005878 ORTHO05D007433 4.1e-52 209.1 164 68.3
C02p02970 Brassica napus HOM05D005878 ORTHO05D007433 4.1e-52 209.1 166 68.1
BolC2t06258H Brassica oleracea HOM05D005878 ORTHO05D007433 4.1e-52 209.1 164 68.3
FvH4_7g03940 Fragaria vesca HOM05D005878 ORTHO05D007433 5.4e-52 208.8 215 58.6
Sed0004070 Sechium edule HOM05D005878 ORTHO05D007433 1.2e-51 207.6 210 56.2
ATR1136G020 Amborella trichopoda HOM05D005878 ORTHO05D007433 1.6e-51 207.2 192 60.4
Sp6g35860 Schrenkiella parvula HOM05D005878 ORTHO05D007433 2.0e-51 206.8 174 65.5
AT5G07020 Arabidopsis thaliana HOM05D005878 ORTHO05D007433 2.7e-51 206.5 173 67.1
PSO384G4469 Papaver somniferum HOM05D005878 ORTHO05D007433 2.7e-51 206.5 217 53.9
AL6G17170 Arabidopsis lyrata HOM05D005878 ORTHO05D007433 5.9e-51 205.3 161 68.9
Thhalv10014567m.g Eutrema salsugineum HOM05D005878 ORTHO05D007433 5.9e-51 205.3 167 68.3
Medtr3g013460 Medicago truncatula HOM05D005878 ORTHO05D007433 7.8e-51 204.9 207 59.9
CSS0046372 Camellia sinensis var. sinensis HOM05D005878 ORTHO05D007433 1.0e-50 204.5 173 65.9
Carub.0006s0594 Capsella rubella HOM05D005878 ORTHO05D007433 1.7e-50 203.8 167 67.7
CARHR206130 Cardamine hirsuta HOM05D005878 ORTHO05D007433 5.6e-49 198.7 167 64.1
CDE02G0435 Ceratophyllum demersum HOM05D005878 ORTHO05D007433 5.6e-49 198.7 207 58.0
Sc14g0005230 Simmondsia chinensis HOM05D005878 ORTHO05D007433 8.0e-48 194.9 207 55.1
HPP92_016121 Vanilla planifolia HOM05D005878 ORTHO05D007433 8.0e-48 194.9 207 54.6
vmacro20585 Vaccinium macrocarpon HOM05D005878 ORTHO05D007433 1.2e-46 191.0 208 53.4
CDE08G0208 Ceratophyllum demersum HOM05D005878 ORTHO05D007433 1.5e-46 190.7 208 55.3
unitig_22.g5332 Utricularia gibba HOM05D005878 ORTHO05D007433 2.0e-46 190.3 219 53.0
BraA02t04902Z Brassica rapa HOM05D005878 ORTHO05D007433 2.6e-46 189.9 176 63.1
Aa31sc25G160 Aethionema arabicum HOM05D005878 ORTHO05D007433 1.6e-43 180.6 129 69.8
AUR62001069 Chenopodium quinoa HOM05D005878 ORTHO05D007433 2.3e-42 176.8 155 56.8
Os02g0556800 Oryza sativa ssp. japonica HOM05D005878 ORTHO05D007433 5.0e-42 175.6 160 56.9
FAN03G0529 Fragaria x ananassa HOM05D005878 ORTHO05D007433 2.5e-41 173.3 161 63.4
SEGI_13955 Sequoiadendron giganteum HOM05D005878 ORTHO05D007433 2.5e-41 173.3 206 47.6
Zm00001eb182020 Zea mays HOM05D005878 ORTHO05D007433 7.3e-41 171.8 164 55.5
Cpa.g.sc188.4 Carica papaya HOM05D005878 ORTHO05D007433 1.6e-40 170.6 116 72.4
Hma1.2p1_0233F.1_g098360 Hydrangea macrophylla HOM05D005878 ORTHO05D007433 6.2e-40 168.7 126 67.5
Lj9A656G41 Lonicera japonica HOM05D005878 ORTHO05D007433 1.5e-38 164.1 131 64.9
Mapoly0116s0014 Marchantia polymorpha HOM05D005878 ORTHO05D007433 2.6e-38 163.3 182 52.7
Atru.chr12.1246 Acer truncatum HOM05D005878 ORTHO05D007433 4.4e-38 162.5 210 53.8
TPR.G1450 Trifolium pratense HOM05D005878 ORTHO05D007433 3.7e-37 159.5 139 64.7
SGA_v2.0_scaffold430G51553 Striga asiatica HOM05D005878 ORTHO05D007433 3.2e-36 156.4 154 56.5
AagrBONN_evm.TU.Sc2ySwM_117.450 Anthoceros agrestis HOM05D005878 ORTHO05D007433 7.0e-36 155.2 170 51.2
AagrBONN_evm.TU.Sc2ySwM_117.1283 Anthoceros agrestis HOM05D005878 ORTHO05D007433 1.2e-35 154.5 167 51.5
Pp3c3_32790 Physcomitrium patens HOM05D005878 ORTHO05D007433 6.6e-34 148.7 167 50.3
A03p56860 Brassica napus HOM05D005878 ORTHO05D007433 8.6e-34 148.3 132 63.6
Pp3c8_5370 Physcomitrium patens HOM05D005878 ORTHO05D007433 5.6e-33 145.6 166 50.0
Hma1.2p1_0233F.1_g098370 Hydrangea macrophylla HOM05D005878 ORTHO05D007433 4.7e-32 142.5 136 58.8
Psat5g223120 Pisum sativum HOM05D005878 ORTHO05D007433 8.1e-32 141.7 203 49.3
SMO143G0125 Selaginella moellendorffii HOM05D005878 ORTHO05D007433 2.2e-29 133.7 198 46.0
Eucgr.L03611 Eucalyptus grandis HOM05D005878 ORTHO05D007433 1.4e-28 131.0 99 68.7
AUR62031722 Chenopodium quinoa HOM05D005878 ORTHO05D007433 3.5e-27 126.3 163 44.2
BcaC03g13176 Brassica carinata HOM05D005878 ORTHO05D007433 4.3e-25 119.4 66 83.3
TAR628G0990 Trochodendron aralioides HOM05D005878 ORTHO05D007433 7.3e-25 118.6 142 49.3
CBR_g50344 Chara braunii HOM05D005878 ORTHO05D007433 1.9e-20 104.0 196 37.8
Atru.chr2.3038 Acer truncatum HOM05D005878 ORTHO05D007433 7.6e-14 82.0 98 52.0
Potri.001G032200 Populus trichocarpa HOM05D005878 ORTHO05D007433 1.9e-12 77.4 211 34.1
Atru.chr7.1915 Acer truncatum HOM05D005878 ORTHO05D007433 1.9e-09 67.4 88 46.6
PGSC0003DMG400040390 Solanum tuberosum HOM05D005878 ORTHO05D007433 9.6e-09 65.1 54 66.7
Atru.chr3.2623 Acer truncatum HOM05D005878 ORTHO05D007433 1.1e-07 61.6 83 47.0


User provided reference genes

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