Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0341231 Helianthus annuus HOM05D005009 ORTHO05D006203 9.7e-175 616.7 309 100.0
ECA248G2538 Erigeron canadensis HOM05D005009 ORTHO05D006203 1.2e-100 370.5 191 93.7
Lsat_1_v5_gn_1_117041 Lactuca sativa HOM05D005009 ORTHO05D006203 8.7e-99 364.4 191 92.1
TPR.G8532 Trifolium pratense HOM05D005009 ORTHO05D006203 2.8e-97 359.4 198 86.9
Atru.chr12.1310 Acer truncatum HOM05D005009 ORTHO05D006203 6.2e-97 358.2 189 91.5
Dinv32009 Davidia involucrata HOM05D005009 ORTHO05D006203 8.2e-97 357.8 189 91.0
Eucgr.E03953 Eucalyptus grandis HOM05D005009 ORTHO05D006203 1.1e-96 357.5 191 90.6
Cc03_g14060 Coffea canephora HOM05D005009 ORTHO05D006203 1.4e-96 357.1 189 91.0
Haze_02993 Corylus avellana HOM05D005009 ORTHO05D006203 1.4e-96 357.1 203 85.7
Migut.B01192 Erythranthe guttata HOM05D005009 ORTHO05D006203 1.4e-96 357.1 191 89.5
Thecc.03G114300 Theobroma cacao HOM05D005009 ORTHO05D006203 1.4e-96 357.1 189 89.9
Duzib068G0995 Durio zibethinus HOM05D005009 ORTHO05D006203 1.8e-96 356.7 189 91.0
Duzib084G0080 Durio zibethinus HOM05D005009 ORTHO05D006203 1.8e-96 356.7 189 90.5
Gohir.A03G073900 Gossypium hirsutum HOM05D005009 ORTHO05D006203 1.8e-96 356.7 189 91.0
Gohir.D03G100300 Gossypium hirsutum HOM05D005009 ORTHO05D006203 1.8e-96 356.7 189 91.0
Gorai.003G105400 Gossypium raimondii HOM05D005009 ORTHO05D006203 1.8e-96 356.7 189 91.0
CiPaw.14G009400 Carya illinoinensis HOM05D005009 ORTHO05D006203 3.1e-96 355.9 189 90.5
Nn7g36825 Nelumbo nucifera HOM05D005009 ORTHO05D006203 3.1e-96 355.9 189 89.9
Dinv11234 Davidia involucrata HOM05D005009 ORTHO05D006203 4.1e-96 355.5 189 89.4
MBI19_g44926_MAGBIO Magnolia biondii HOM05D005009 ORTHO05D006203 4.1e-96 355.5 188 91.0
Potri.003G193900 Populus trichocarpa HOM05D005009 ORTHO05D006203 4.1e-96 355.5 190 89.5
Ciclev10002585m.g Citrus clementina HOM05D005009 ORTHO05D006203 5.3e-96 355.1 189 90.5
COL.COLO4_32171 Corchorus olitorius HOM05D000011 ORTHO05D006203 5.3e-96 355.1 188 89.9
Manes.11G007500 Manihot esculenta HOM05D005009 ORTHO05D006203 5.3e-96 355.1 189 89.9
GSVIVG01036607001 Vitis vinifera HOM05D005009 ORTHO05D006203 5.3e-96 355.1 189 89.9
MSTRG.20500 Avicennia marina HOM05D005009 ORTHO05D006203 6.9e-96 354.8 190 88.9
Medtr8g040630 Medicago truncatula HOM05D005009 ORTHO05D006203 6.9e-96 354.8 193 87.6
PSO384G0249 Papaver somniferum HOM05D005009 ORTHO05D006203 9.0e-96 354.4 191 89.5
Phvul.011G192750 Phaseolus vulgaris HOM05D005009 ORTHO05D006203 9.0e-96 354.4 191 89.0
PGR031G2406 Punica granatum HOM05D005009 ORTHO05D006203 1.2e-95 354.0 189 89.4
ATR0307G112 Amborella trichopoda HOM05D005009 ORTHO05D006203 1.5e-95 353.6 189 89.4
Lalb_Chr19g0132931 Lupinus albus HOM05D005009 ORTHO05D006203 1.5e-95 353.6 189 89.4
QL04p021447 Quercus lobata HOM05D005009 ORTHO05D006203 1.5e-95 353.6 189 89.9
QL07p029267 Quercus lobata HOM05D005009 ORTHO05D006203 1.5e-95 353.6 189 89.9
DCAR_006603 Daucus carota HOM05D005009 ORTHO05D006203 2.0e-95 353.2 189 88.9
PSO339G0131 Papaver somniferum HOM05D005009 ORTHO05D006203 2.0e-95 353.2 191 89.0
Prupe.2G043300 Prunus persica HOM05D005009 ORTHO05D006203 2.0e-95 353.2 189 89.4
SGA_v2.0_scaffold408G51079 Striga asiatica HOM05D005009 ORTHO05D006203 2.0e-95 353.2 189 88.9
TWI15G1146 Tripterygium wilfordii HOM05D005009 ORTHO05D006203 2.0e-95 353.2 189 88.9
Actinidia06220 Actinidia chinensis HOM05D005009 ORTHO05D006203 2.6e-95 352.8 189 88.9
EL10Ac2g02762 Beta vulgaris HOM05D005009 ORTHO05D006203 2.6e-95 352.8 191 88.5
Nitab4.5_0002838g0060 Nicotiana tabacum HOM05D005009 ORTHO05D006203 2.6e-95 352.8 188 90.4
TAR633G2352 Trochodendron aralioides HOM05D005009 ORTHO05D006203 2.6e-95 352.8 189 88.9
Aqoxy2G00437 Aquilegia oxysepala HOM05D005009 ORTHO05D006203 3.4e-95 352.4 189 88.4
CSS0011052 Camellia sinensis var. sinensis HOM05D005009 ORTHO05D006203 3.4e-95 352.4 189 88.9
Psat4g146480 Pisum sativum HOM05D005009 ORTHO05D006203 3.4e-95 352.4 191 88.5
THA.LOC104826749 Tarenaya hassleriana HOM05D005009 ORTHO05D006203 3.4e-95 352.4 189 88.4
Carub.0003s1167 Capsella rubella HOM05D005009 ORTHO05D006203 4.5e-95 352.1 189 88.4
Eucgr.G03210 Eucalyptus grandis HOM05D005009 ORTHO05D006203 5.8e-95 351.7 192 87.5
Solyc01g096610.4 Solanum lycopersicum HOM05D005009 ORTHO05D006203 5.8e-95 351.7 191 88.5
Sopen01g040340 Solanum pennellii HOM05D005009 ORTHO05D006203 5.8e-95 351.7 191 88.5
PGSC0003DMG401003286 Solanum tuberosum HOM05D005009 ORTHO05D006203 5.8e-95 351.7 191 88.5
FvH4_7g03830 Fragaria vesca HOM05D005009 ORTHO05D006203 1.0e-94 350.9 190 88.4
FAN03G3221 Fragaria x ananassa HOM05D005009 ORTHO05D006203 1.0e-94 350.9 190 88.4
FAN06G1190 Fragaria x ananassa HOM05D005009 ORTHO05D006203 1.0e-94 350.9 190 88.4
Lj3g0027433 Lotus japonicus HOM05D005009 ORTHO05D006203 1.0e-94 350.9 191 88.0
AL3G23960 Arabidopsis lyrata HOM05D005009 ORTHO05D006203 1.3e-94 350.5 189 87.3
MBI19_g37444_MAGBIO Magnolia biondii HOM05D005009 ORTHO05D006203 1.3e-94 350.5 195 88.2
FAN10G3328 Fragaria x ananassa HOM05D005009 ORTHO05D006203 2.2e-94 349.7 189 88.9
Zm00001eb317990 Zea mays HOM05D005009 ORTHO05D006203 2.2e-94 349.7 191 87.4
AUR62031741 Chenopodium quinoa HOM05D005009 ORTHO05D006203 2.9e-94 349.4 188 88.8
AUR62032626 Chenopodium quinoa HOM05D005009 ORTHO05D006203 2.9e-94 349.4 188 88.8
Glyma.09G090300 Glycine max HOM05D005009 ORTHO05D006203 2.9e-94 349.4 191 87.4
RcHm_v2.0_Chr1g0327201 Rosa chinensis HOM05D005009 ORTHO05D006203 2.9e-94 349.4 190 87.9
Sp3g10520 Schrenkiella parvula HOM05D005009 ORTHO05D006203 3.8e-94 349.0 189 87.8
AT3G12300 Arabidopsis thaliana HOM05D005009 ORTHO05D006203 5.0e-94 348.6 189 86.8
Thhalv10021577m.g Eutrema salsugineum HOM05D005009 ORTHO05D006203 1.4e-93 347.1 190 86.3
Hma1.2p1_0837F.1_g226250 Hydrangea macrophylla HOM05D005009 ORTHO05D006203 1.9e-93 346.7 201 85.1
SEGI_18977 Sequoiadendron giganteum HOM05D005009 ORTHO05D006203 1.9e-93 346.7 188 87.2
BcaC09g48230 Brassica carinata HOM05D005009 ORTHO05D006203 3.2e-93 345.9 189 86.8
BcaB04g18685 Brassica carinata HOM05D005009 ORTHO05D006203 7.2e-93 344.7 189 86.2
CDE08G1579 Ceratophyllum demersum HOM05D005009 ORTHO05D006203 7.2e-93 344.7 189 86.8
Sabra03G0144600 Salix brachista HOM05D005009 ORTHO05D006203 7.2e-93 344.7 201 84.1
unitig_22.g5330 Utricularia gibba HOM05D005009 ORTHO05D006203 1.2e-92 344.0 193 87.0
BcaC01g04053 Brassica carinata HOM05D005009 ORTHO05D006203 2.1e-92 343.2 189 85.2
BolC3t16835H Brassica oleracea HOM05D005009 ORTHO05D006203 2.1e-92 343.2 188 86.2
Ca_24007_v3 Cicer arietinum L. HOM05D005009 ORTHO05D006203 2.1e-92 343.2 188 86.7
CsaV3_5G036940 Cucumis sativus L. HOM05D005009 ORTHO05D006203 2.7e-92 342.8 189 86.2
GSVIVG01028667001 Vitis vinifera HOM05D005009 ORTHO05D006203 2.7e-92 342.8 188 87.8
A03p37590 Brassica napus HOM05D005009 ORTHO05D006203 3.5e-92 342.4 191 84.8
C01p53010 Brassica napus HOM05D005009 ORTHO05D006203 6.1e-92 341.7 188 85.6
C03p45580 Brassica napus HOM05D005009 ORTHO05D006203 7.9e-92 341.3 188 85.1
Mapoly0109s0062 Marchantia polymorpha HOM05D005009 ORTHO05D006203 1.8e-91 340.1 189 83.1
arahy.Tifrunner.gnm1.ann1.CDA2TW Arachis hypogaea HOM05D005009 ORTHO05D006203 3.0e-91 339.3 210 80.0
ClCG05G027020 Citrullus lanatus HOM05D005009 ORTHO05D006203 3.9e-91 339.0 189 85.2
BolC1t05245H Brassica oleracea HOM05D005009 ORTHO05D006203 5.1e-91 338.6 188 85.1
Rhsim07G0069300 Rhododendron simsii HOM05D005009 ORTHO05D006203 8.7e-91 337.8 216 77.8
A06p13990 Brassica napus HOM05D005009 ORTHO05D006203 1.1e-90 337.4 188 85.1
CANSAT01G2494 Cannabis sativa HOM05D005009 ORTHO05D006203 3.3e-90 335.9 190 84.2
MELO3C034019.2 Cucumis melo HOM05D005009 ORTHO05D006203 3.3e-90 335.9 196 83.2
Ah.01g018000 Amaranthus hybridus HOM05D005009 ORTHO05D006203 5.7e-90 335.1 183 87.4
Hund13390 Selenicereus undatus HOM05D005009 ORTHO05D006203 9.7e-90 334.3 188 85.1
AagrBONN_evm.TU.Sc2ySwM_340.215 Anthoceros agrestis HOM05D005009 ORTHO05D006203 2.2e-89 333.2 189 82.0
Pp3c16_8300 Physcomitrium patens HOM05D005009 ORTHO05D006203 8.2e-89 331.3 205 76.1
arahy.Tifrunner.gnm1.ann1.SBUN5C Arachis hypogaea HOM05D005009 ORTHO05D006203 3.1e-88 329.3 230 73.5
Sed0026819 Sechium edule HOM05D005009 ORTHO05D006203 4.1e-88 328.9 216 76.4
SMO137G0355 Selaginella moellendorffii HOM05D005009 ORTHO05D006203 3.4e-87 325.9 189 78.8
Cre07.g351650 Chlamydomonas reinhardtii HOM05D005009 ORTHO05D006203 4.5e-87 325.5 191 79.1
PRCOL_00001494 Prasinoderma coloniale HOM05D005009 ORTHO05D006203 1.0e-86 324.3 189 79.9
Aa31LG3G6530 Aethionema arabicum HOM05D005009 ORTHO05D006203 5.5e-85 318.5 189 80.4
Peaxi162Scf00220g00315 Petunia axillaris HOM05D005009 ORTHO05D006203 5.5e-85 318.5 173 88.4
MCO01G737 Micromonas commoda HOM05D005009 ORTHO05D006203 1.2e-84 317.4 191 77.0
Os09g0510200 Oryza sativa ssp. japonica HOM05D005009 ORTHO05D006203 8.8e-83 311.2 171 84.8
vmacro21942 Vaccinium macrocarpon HOM05D005009 ORTHO05D006203 1.1e-82 310.8 181 83.4
vmacro23458 Vaccinium macrocarpon HOM05D005009 ORTHO05D006203 1.1e-82 310.8 181 83.4
SMO137G0211 Selaginella moellendorffii HOM05D005009 ORTHO05D006203 3.3e-82 309.3 188 75.5
Pp3c7_7130 Physcomitrium patens HOM05D005009 ORTHO05D006203 1.7e-81 307.0 188 74.5
VMungo1127G1850 Vigna mungo HOM05D005009 ORTHO05D006203 3.8e-78 295.8 167 84.4
Cpa.g.sc82.9 Carica papaya HOM05D005009 ORTHO05D006203 1.1e-77 294.3 159 86.8
CSS0003702 Camellia sinensis var. sinensis HOM05D005009 ORTHO05D006203 1.4e-77 293.9 159 87.4
SHI34551 Sapria himalayana HOM05D005009 ORTHO05D006203 3.6e-76 289.3 160 85.6
Lj9A658G62 Lonicera japonica HOM05D005009 ORTHO05D006203 2.4e-72 276.6 172 78.5
Glyma.13G184700 Glycine max HOM05D005009 ORTHO05D006203 1.6e-71 273.9 161 82.0
CAN.G134.28 Capsicum annuum HOM05D005009 ORTHO05D006203 4.2e-69 265.8 208 66.3
Haze_26638 Corylus avellana HOM05D005009 ORTHO05D006203 2.7e-68 263.1 188 67.6
Pp3c25_460 Physcomitrium patens HOM05D005009 ORTHO05D006203 2.5e-61 240.0 188 63.3
Sed0013386 Sechium edule HOM05D005009 ORTHO05D006203 1.5e-58 230.7 140 80.0
SMO232G0039 Selaginella moellendorffii HOM05D005009 ORTHO05D006203 9.8e-58 228.0 183 59.6
SMO352G0037 Selaginella moellendorffii HOM05D005009 ORTHO05D006203 2.7e-55 219.9 206 51.9
HPP92_011758 Vanilla planifolia HOM05D005009 ORTHO05D006203 2.2e-54 216.9 148 72.3
CDE08G0779 Ceratophyllum demersum HOM05D005009 ORTHO05D006203 8.5e-54 214.9 112 89.3
Glyma.13G188400 Glycine max HOM05D005009 ORTHO05D006203 1.4e-51 207.6 163 69.9
Oeu064146.2 Olea europaea HOM05D005009 ORTHO05D006203 2.6e-50 203.4 112 85.7
BraA03t12913Z Brassica rapa HOM05D005009 ORTHO05D006203 3.4e-50 203.0 106 86.8
HPP92_011756 Vanilla planifolia HOM05D005009 ORTHO05D006203 3.4e-50 203.0 109 89.9
Nitab4.5_0004168g0130 Nicotiana tabacum HOM05D005009 ORTHO05D006203 2.4e-48 196.8 111 86.5
MD02G1276800 Malus domestica HOM05D005009 ORTHO05D006203 7.0e-48 195.3 109 87.2
ClCG05G014250 Citrullus lanatus HOM05D005009 ORTHO05D006203 6.6e-46 188.7 158 61.4
Actinidia07967 Actinidia chinensis HOM05D005009 ORTHO05D006203 1.9e-37 160.6 80 90.0
Cfa001149 Carpinus fangiana HOM05D005009 ORTHO05D006203 5.6e-37 159.1 80 90.0
MD02G1276900 Malus domestica HOM05D005009 ORTHO05D006203 9.5e-37 158.3 80 88.8
Glyma.13G192001 Glycine max HOM05D005009 ORTHO05D006203 2.1e-36 157.1 82 87.8
HPP92_011747 Vanilla planifolia HOM05D005009 ORTHO05D006203 8.0e-36 155.2 81 86.4
Pp3c6_12450 Physcomitrium patens HOM05D005009 ORTHO05D006203 9.8e-34 148.3 157 47.8
Glyma.13G188051 Glycine max HOM05D005009 ORTHO05D006203 2.2e-33 147.1 84 85.7
Glyma.13G190100 Glycine max HOM05D005009 ORTHO05D006203 2.7e-31 140.2 74 86.5
Sc11g0006340 Simmondsia chinensis HOM05D005009 ORTHO05D006203 4.6e-31 139.4 79 86.1
CARHR086850 Cardamine hirsuta HOM05D005009 ORTHO05D006203 1.3e-30 137.9 71 87.3
MD07G1044300 Malus domestica HOM05D005009 ORTHO05D006203 7.3e-29 132.1 69 87.0
BcaC09g48229 Brassica carinata HOM05D005009 ORTHO05D006203 5.8e-26 122.5 68 82.4
C01p53030 Brassica napus HOM05D005009 ORTHO05D006203 5.8e-26 122.5 68 82.4
Prupe.3G123900 Prunus persica HOM05D005009 ORTHO05D006203 7.5e-26 122.1 87 74.7
BolC1t05246H Brassica oleracea HOM05D005009 ORTHO05D006203 1.7e-25 120.9 68 80.9
Manes.04G156350 Manihot esculenta HOM05D005009 ORTHO05D006203 1.9e-16 90.9 51 76.5
arahy.Tifrunner.gnm1.ann1.WDN55T Arachis hypogaea HOM05D000001 ORTHO05D009381 1.2e-15 88.2 47 80.9
A03p22660 Brassica napus HOM05D005009 ORTHO05D033042 2.4e-11 73.9 38 84.2
A10p02030 Brassica napus HOM05D005009 ORTHO05D006203 2.4e-11 73.9 38 84.2
C03p63540 Brassica napus HOM05D005009 ORTHO05D033042 2.4e-11 73.9 38 84.2
BraA02t08111Z Brassica rapa HOM05D005009 ORTHO05D033042 2.4e-11 73.9 38 84.2
A01p39420 Brassica napus HOM05D005009 ORTHO05D006203 3.1e-11 73.6 37 86.5


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