Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0340611 Helianthus annuus HOM05D005875 ORTHO05D007213 2.6e-39 164.9 79 100.0
ECA248G0827 Erigeron canadensis HOM05D005875 ORTHO05D007213 2.5e-34 148.3 73 98.6
Lsat_1_v5_gn_5_169860 Lactuca sativa HOM05D005875 ORTHO05D007213 4.7e-33 144.1 72 97.2
Solyc06g076460.4 Solanum lycopersicum HOM05D005875 ORTHO05D007213 6.2e-33 143.7 78 85.9
Dinv34304 Davidia involucrata HOM05D005875 ORTHO05D007213 1.4e-32 142.5 73 95.9
Dinv43007 Davidia involucrata HOM05D005875 ORTHO05D007213 1.4e-32 142.5 73 95.9
Dinv43090 Davidia involucrata HOM05D005875 ORTHO05D007213 1.4e-32 142.5 73 95.9
Migut.F01279 Erythranthe guttata HOM05D005875 ORTHO05D007213 1.4e-32 142.5 73 95.9
CAN.G394.82 Capsicum annuum HOM05D005875 ORTHO05D007213 1.8e-32 142.1 73 94.5
Nitab4.5_0000839g0140 Nicotiana tabacum HOM05D005875 ORTHO05D007213 1.8e-32 142.1 73 94.5
Nitab4.5_0008156g0010 Nicotiana tabacum HOM05D005875 ORTHO05D007213 1.8e-32 142.1 73 94.5
Peaxi162Scf00481g00628 Petunia axillaris HOM05D005875 ORTHO05D007213 1.8e-32 142.1 73 94.5
Atru.chr3.4025 Acer truncatum HOM05D005875 ORTHO05D007213 4.0e-32 141.0 78 89.7
EL10Ac7g16086 Beta vulgaris HOM05D005875 ORTHO05D007213 4.0e-32 141.0 73 91.8
Ciclev10029658m.g Citrus clementina HOM05D005875 ORTHO05D007213 4.0e-32 141.0 78 89.7
Sc21g0006090 Simmondsia chinensis HOM05D005875 ORTHO05D007213 5.2e-32 140.6 73 93.2
CSS0002992 Camellia sinensis var. sinensis HOM05D005875 ORTHO05D007213 6.8e-32 140.2 73 91.8
CSS0010627 Camellia sinensis var. sinensis HOM05D005875 ORTHO05D007213 6.8e-32 140.2 73 91.8
SalBow2G0925 Salvia bowleyana HOM05D005875 ORTHO05D007213 8.9e-32 139.8 73 93.2
Hma1.2p1_0543F.1_g175400 Hydrangea macrophylla HOM05D005875 ORTHO05D007213 1.2e-31 139.4 71 95.8
Manes.01G167608 Manihot esculenta HOM05D005875 ORTHO05D007213 1.2e-31 139.4 78 87.2
unitig_60.g25692 Utricularia gibba HOM05D005875 ORTHO05D007213 1.5e-31 139.0 73 93.2
Ah.08g220240 Amaranthus hybridus HOM05D005875 ORTHO05D007213 2.0e-31 138.7 73 90.4
MD11G1092100 Malus domestica HOM05D005875 ORTHO05D007213 2.6e-31 138.3 73 91.8
Actinidia08549 Actinidia chinensis HOM05D005875 ORTHO05D007213 3.4e-31 137.9 73 90.4
RcHm_v2.0_Chr5g0066881 Rosa chinensis HOM05D005875 ORTHO05D007213 3.4e-31 137.9 73 90.4
Sopen06g032870 Solanum pennellii HOM05D005875 ORTHO05D007213 3.4e-31 137.9 73 90.4
PGSC0003DMG400030334 Solanum tuberosum HOM05D005875 ORTHO05D007213 3.4e-31 137.9 73 90.4
Potri.009G037800 Populus trichocarpa HOM05D005875 ORTHO05D007213 4.4e-31 137.5 73 91.8
Oeu002453.3 Olea europaea HOM05D005875 ORTHO05D007213 7.6e-31 136.7 75 90.7
TWI79G0668 Tripterygium wilfordii HOM05D005875 ORTHO05D007213 7.6e-31 136.7 78 85.9
vmacro03020 Vaccinium macrocarpon HOM05D005875 ORTHO05D007213 7.6e-31 136.7 73 90.4
MD03G1084600 Malus domestica HOM05D005875 ORTHO05D007213 9.9e-31 136.3 73 90.4
Manes.02G126800 Manihot esculenta HOM05D005875 ORTHO05D007213 9.9e-31 136.3 72 90.3
Oeu017416.1 Olea europaea HOM05D005875 ORTHO05D007213 9.9e-31 136.3 71 94.4
ClCG03G001200 Citrullus lanatus HOM05D005875 ORTHO05D007213 1.3e-30 136.0 73 89.0
Duzib170G0534 Durio zibethinus HOM05D005875 ORTHO05D007213 1.3e-30 136.0 72 91.7
Nn2g11283 Nelumbo nucifera HOM05D005875 ORTHO05D007213 1.3e-30 136.0 73 90.4
DCAR_005929 Daucus carota HOM05D005875 ORTHO05D007213 1.7e-30 135.6 73 89.0
Hund04909 Selenicereus undatus HOM05D005875 ORTHO05D007213 2.2e-30 135.2 72 90.3
Prupe.6G067900 Prunus persica HOM05D005875 ORTHO05D007213 2.9e-30 134.8 73 89.0
CDE09G0926 Ceratophyllum demersum HOM05D005875 ORTHO05D007213 3.8e-30 134.4 73 87.7
Duzib168G0895 Durio zibethinus HOM05D005875 ORTHO05D007213 3.8e-30 134.4 72 90.3
Duzib168G1854 Durio zibethinus HOM05D005875 ORTHO05D007213 3.8e-30 134.4 72 90.3
Lalb_Chr19g0138001 Lupinus albus HOM05D005875 ORTHO05D007213 3.8e-30 134.4 73 89.0
PGR031G3365 Punica granatum HOM05D005875 ORTHO05D007213 3.8e-30 134.4 78 84.6
Gohir.A13G225700 Gossypium hirsutum HOM05D005875 ORTHO05D007213 4.9e-30 134.0 72 90.3
Gohir.D13G231100 Gossypium hirsutum HOM05D005875 ORTHO05D007213 4.9e-30 134.0 72 90.3
Gorai.013G261600 Gossypium raimondii HOM05D005875 ORTHO05D007213 4.9e-30 134.0 72 90.3
Aqoxy1G00802 Aquilegia oxysepala HOM05D005875 ORTHO05D007213 6.4e-30 133.7 73 89.0
CiPaw.13G087500 Carya illinoinensis HOM05D005875 ORTHO05D007213 6.4e-30 133.7 73 89.0
FvH4_3g37160 Fragaria vesca HOM05D005875 ORTHO05D007213 6.4e-30 133.7 73 89.0
FAN11G0304 Fragaria x ananassa HOM05D005875 ORTHO05D007213 6.4e-30 133.7 73 89.0
FAN16G0494 Fragaria x ananassa HOM05D005875 ORTHO05D007213 6.4e-30 133.7 73 89.0
FAN21G1946 Fragaria x ananassa HOM05D005875 ORTHO05D007213 6.4e-30 133.7 73 89.0
Sed0009265 Sechium edule HOM05D005875 ORTHO05D007213 6.4e-30 133.7 73 87.7
Thecc.09G312900 Theobroma cacao HOM05D005875 ORTHO05D007213 6.4e-30 133.7 72 90.3
Glyma.13G339300 Glycine max HOM05D005875 ORTHO05D007213 8.4e-30 133.3 73 87.7
MBI14_g02873_MAGBIO Magnolia biondii HOM05D005875 ORTHO05D007213 8.4e-30 133.3 77 83.1
Phvul.L008443 Phaseolus vulgaris HOM05D005875 ORTHO05D007213 8.4e-30 133.3 73 87.7
Rhsim13G0076300 Rhododendron simsii HOM05D005875 ORTHO05D007213 8.4e-30 133.3 73 89.0
CANSAT54G1476 Cannabis sativa HOM05D005875 ORTHO05D007213 1.1e-29 132.9 73 86.3
HPP92_019857 Vanilla planifolia HOM05D005875 ORTHO05D007213 1.4e-29 132.5 73 86.3
arahy.Tifrunner.gnm1.ann1.0PDV4E Arachis hypogaea HOM05D005875 ORTHO05D007213 1.9e-29 132.1 73 86.3
arahy.Tifrunner.gnm1.ann1.L8JNUU Arachis hypogaea HOM05D005875 ORTHO05D007213 1.9e-29 132.1 73 86.3
Cc01_g13510 Coffea canephora HOM05D005875 ORTHO05D007213 1.9e-29 132.1 73 86.3
Psat7g211880 Pisum sativum HOM05D005875 ORTHO05D007213 1.9e-29 132.1 73 84.9
Sed0004662 Sechium edule HOM05D005875 ORTHO05D007213 1.9e-29 132.1 72 87.5
Ca_29565_v3 Cicer arietinum L. HOM05D005875 ORTHO05D007213 2.4e-29 131.7 73 84.9
Duzib150G0367 Durio zibethinus HOM05D005875 ORTHO05D007213 2.4e-29 131.7 72 88.9
FAN25G1682 Fragaria x ananassa HOM05D005875 ORTHO05D007213 2.4e-29 131.7 73 87.7
QL01p028144 Quercus lobata HOM05D005875 ORTHO05D007213 2.4e-29 131.7 73 87.7
TPR.G23613 Trifolium pratense HOM05D005875 ORTHO05D007213 3.2e-29 131.3 73 83.6
VMungo1080G0472 Vigna mungo HOM05D005875 ORTHO05D007213 4.1e-29 131.0 77 83.1
CDE02G2526 Ceratophyllum demersum HOM05D005875 ORTHO05D007213 5.4e-29 130.6 73 84.9
Glyma.15G035100 Glycine max HOM05D005875 ORTHO05D007213 5.4e-29 130.6 73 84.9
Ca_20611_v3 Cicer arietinum L. HOM05D005875 ORTHO05D007213 7.1e-29 130.2 72 84.7
Medtr4g064903 Medicago truncatula HOM05D005875 ORTHO05D007213 7.1e-29 130.2 73 83.6
THA.LOC109115974 Tarenaya hassleriana HOM05D005875 ORTHO05D007213 9.2e-29 129.8 72 86.1
Haze_24201 Corylus avellana HOM05D005875 ORTHO05D007213 3.5e-28 127.9 72 84.7
PSO017G5786 Papaver somniferum HOM05D005875 ORTHO05D007213 7.8e-28 126.7 73 83.6
PSO478G4319 Papaver somniferum HOM05D005875 ORTHO05D007213 7.8e-28 126.7 73 83.6
THA.LOC104799420 Tarenaya hassleriana HOM05D005875 ORTHO05D007213 7.8e-28 126.7 72 83.3
Lj3g0010434 Lotus japonicus HOM05D005875 ORTHO05D007213 1.7e-27 125.6 73 80.8
Aa31LG1G12030 Aethionema arabicum HOM05D005875 ORTHO05D007213 3.0e-27 124.8 72 81.9
Gohir.A03G046200 Gossypium hirsutum HOM05D005875 ORTHO05D007213 3.3e-26 121.3 73 80.8
AUR62028437 Chenopodium quinoa HOM05D005875 ORTHO05D007213 5.6e-26 120.6 77 75.3
AUR62041948 Chenopodium quinoa HOM05D005875 ORTHO05D007213 9.6e-26 119.8 77 75.3
Mapoly0001s0456 Marchantia polymorpha HOM05D005875 ORTHO05D007213 9.6e-26 119.8 73 78.1
SEGI_34558 Sequoiadendron giganteum HOM05D005875 ORTHO05D007213 1.2e-25 119.4 73 76.7
AagrBONN_evm.TU.Sc2ySwM_117.1366 Anthoceros agrestis HOM05D005875 ORTHO05D007213 2.1e-25 118.6 73 78.1
Gorai.003G127900 Gossypium raimondii HOM05D005875 ORTHO05D007213 2.1e-25 118.6 72 77.8
TAR369G0127 Trochodendron aralioides HOM05D005875 ORTHO05D007213 2.1e-25 118.6 73 79.5
Zm00001eb371730 Zea mays HOM05D005875 ORTHO05D007213 2.1e-25 118.6 77 75.3
CARHR285400 Cardamine hirsuta HOM05D005875 ORTHO05D007213 2.8e-25 118.2 69 79.7
ATR0210G023 Amborella trichopoda HOM05D005875 ORTHO05D007213 3.6e-25 117.9 73 76.7
A10p16360 Brassica napus HOM05D005875 ORTHO05D007213 8.1e-25 116.7 68 80.9
BraA10t43722Z Brassica rapa HOM05D005875 ORTHO05D007213 8.1e-25 116.7 68 80.9
Sp6g20850 Schrenkiella parvula HOM05D005875 ORTHO05D007213 8.1e-25 116.7 68 80.9
AL8G35550 Arabidopsis lyrata HOM05D005875 ORTHO05D007213 1.1e-24 116.3 68 80.9
AT5G59140 Arabidopsis thaliana HOM05D005875 ORTHO05D007213 1.1e-24 116.3 68 80.9
C09p51420 Brassica napus HOM05D005875 ORTHO05D007213 1.1e-24 116.3 68 80.9
BolC9t58002H Brassica oleracea HOM05D005875 ORTHO05D007213 1.1e-24 116.3 68 80.9
Thhalv10015122m.g Eutrema salsugineum HOM05D005875 ORTHO05D007213 1.1e-24 116.3 68 80.9
Os11g0707700 Oryza sativa ssp. japonica HOM05D005875 ORTHO05D007213 1.1e-24 116.3 67 82.1
BcaB01g04606 Brassica carinata HOM05D005875 ORTHO05D007213 1.4e-24 115.9 68 79.4
A03p11880 Brassica napus HOM05D005875 ORTHO05D007213 1.4e-24 115.9 68 79.4
C03p13940 Brassica napus HOM05D005875 ORTHO05D007213 1.4e-24 115.9 68 79.4
BolC3t13842H Brassica oleracea HOM05D005875 ORTHO05D007213 1.4e-24 115.9 68 79.4
BraA03t10499Z Brassica rapa HOM05D005875 ORTHO05D007213 1.4e-24 115.9 68 79.4
SMO137G0055 Selaginella moellendorffii HOM05D005875 ORTHO05D007213 1.8e-24 115.5 73 74.0
BcaC04g19811 Brassica carinata HOM05D005875 ORTHO05D007213 2.4e-24 115.2 68 79.4
Carub.0008s1981 Capsella rubella HOM05D005875 ORTHO05D007213 2.0e-23 112.1 68 77.9
Eucgr.A01573 Eucalyptus grandis HOM05D005875 ORTHO05D007213 2.6e-23 111.7 116 56.9
Pp3c1_40610 Physcomitrium patens HOM05D005875 ORTHO05D007213 5.8e-23 110.5 73 68.5
CBR_g20299 Chara braunii HOM05D005875 ORTHO05D007213 7.6e-23 110.2 73 72.6
CsaV3_1G035700 Cucumis sativus L. HOM05D005875 ORTHO05D007213 1.3e-22 109.4 58 87.9
BcaB01g04618 Brassica carinata HOM05D005875 ORTHO05D007213 4.2e-21 104.4 60 78.3
Pp3c17_23040 Physcomitrium patens HOM05D005875 ORTHO05D007213 7.1e-21 103.6 69 68.1
arahy.Tifrunner.gnm1.ann1.02RT51 Arachis hypogaea HOM05D005875 ORTHO05D007213 7.8e-20 100.1 62 80.6
Actinidia12881 Actinidia chinensis HOM05D005875 ORTHO05D007213 1.3e-19 99.4 57 86.0
Cre01.g061442 Chlamydomonas reinhardtii HOM05D005875 ORTHO05D007213 2.3e-19 98.6 68 67.6
GSVIVG01024863001 Vitis vinifera HOM05D005875 ORTHO05D007213 1.1e-18 96.3 49 91.8
Gohir.D03G120951 Gossypium hirsutum HOM05D005875 ORTHO05D007213 2.8e-17 91.7 72 66.7
AL48U10050 Arabidopsis lyrata HOM05D005875 ORTHO05D007213 4.8e-17 90.9 123 44.7
BcaB08g36282 Brassica carinata HOM05D005875 ORTHO05D007213 4.8e-17 90.9 59 72.9
PRCOL_00005420 Prasinoderma coloniale HOM05D005875 ORTHO05D007213 6.2e-17 90.5 72 59.7
MCO15G569 Micromonas commoda HOM05D005875 ORTHO05D007213 3.1e-16 88.2 65 60.0
arahy.Tifrunner.gnm1.ann1.M3Y99M Arachis hypogaea HOM05D005875 ORTHO05D007213 1.3e-11 72.8 42 81.0
Cpa.g.sc81.58 Carica papaya HOM05D005875 ORTHO05D007213 3.9e-11 71.2 37 94.6
SGA_v2.0_scaffold104G30156 Striga asiatica HOM05D005875 ORTHO05D007213 3.9e-11 71.2 34 94.1
MELO3C020599.2 Cucumis melo HOM05D005875 ORTHO05D007213 5.1e-11 70.9 36 83.3
Haze_27721 Corylus avellana HOM05D005875 ORTHO05D007213 2.1e-09 65.5 68 47.1


User provided reference genes

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