Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0340111 Helianthus annuus HOM05D007682 ORTHO05D009690 4.2e-34 148.7 78 100.0
Lsat_1_v5_gn_7_72960 Lactuca sativa HOM05D007682 ORTHO05D009690 5.4e-26 121.7 67 94.0
ECA236G4368 Erigeron canadensis HOM05D000036 ORTHO05D000441 1.6e-22 110.2 64 87.5
Phvul.006G088300 Phaseolus vulgaris HOM05D007682 ORTHO05D009690 3.1e-21 105.9 77 75.3
CSS0049840 Camellia sinensis var. sinensis HOM05D007682 ORTHO05D009690 1.5e-20 103.6 63 85.7
DCAR_022138 Daucus carota HOM05D007682 ORTHO05D009690 4.5e-20 102.1 66 83.3
Peaxi162Scf00037g01515 Petunia axillaris HOM05D007682 ORTHO05D009690 5.8e-20 101.7 59 88.1
PSO407G0292 Papaver somniferum HOM05D007682 ORTHO05D009690 7.6e-20 101.3 59 88.1
Glyma.19G231600 Glycine max HOM05D007682 ORTHO05D009690 1.0e-19 100.9 71 78.9
HPP92_010663 Vanilla planifolia HOM05D007682 ORTHO05D009690 1.0e-19 100.9 71 78.9
PSO170G1207 Papaver somniferum HOM05D007682 ORTHO05D009690 1.7e-19 100.1 59 86.4
Haze_04118 Corylus avellana HOM05D007682 ORTHO05D009690 2.2e-19 99.8 77 71.4
Nitab4.5_0003113g0070 Nicotiana tabacum HOM05D007682 ORTHO05D009690 2.2e-19 99.8 59 86.4
PGR031G1366 Punica granatum HOM05D007682 ORTHO05D009690 2.2e-19 99.8 72 75.0
Solyc01g099930.3 Solanum lycopersicum HOM05D007682 ORTHO05D009690 2.2e-19 99.8 65 80.0
Atru.chr2.100 Acer truncatum HOM05D007682 ORTHO05D009690 2.9e-19 99.4 63 79.4
CAN.G1273.42 Capsicum annuum HOM05D007682 ORTHO05D009690 2.9e-19 99.4 63 82.5
Nn4g25761 Nelumbo nucifera HOM05D007682 ORTHO05D009690 2.9e-19 99.4 59 84.7
Prupe.8G021600 Prunus persica HOM05D007682 ORTHO05D009690 2.9e-19 99.4 63 81.0
RcHm_v2.0_Chr6g0276771 Rosa chinensis HOM05D007682 ORTHO05D009690 2.9e-19 99.4 63 81.0
SGA_v2.0_scaffold81G26104 Striga asiatica HOM05D007682 ORTHO05D009690 2.9e-19 99.4 65 76.9
CDE11G0615 Ceratophyllum demersum HOM05D007682 ORTHO05D009690 3.8e-19 99.0 61 80.3
Oeu010924.1 Olea europaea HOM05D007682 ORTHO05D009690 3.8e-19 99.0 62 82.3
Thecc.05G315600 Theobroma cacao HOM05D007682 ORTHO05D009690 3.8e-19 99.0 63 81.0
THA.LOC104821730 Tarenaya hassleriana HOM05D007682 ORTHO05D009690 4.9e-19 98.6 61 82.0
TAR633G0769 Trochodendron aralioides HOM05D007682 ORTHO05D009690 4.9e-19 98.6 65 78.5
Duzib177G0692 Durio zibethinus HOM05D007682 ORTHO05D009690 6.5e-19 98.2 60 83.3
CDE05G1347 Ceratophyllum demersum HOM05D007682 ORTHO05D009690 8.4e-19 97.8 58 84.5
Migut.N02098 Erythranthe guttata HOM05D007682 ORTHO05D009690 8.4e-19 97.8 59 86.4
FAN20G0672 Fragaria x ananassa HOM05D007682 ORTHO05D009690 8.4e-19 97.8 63 79.4
FAN24G1339 Fragaria x ananassa HOM05D007682 ORTHO05D009690 8.4e-19 97.8 63 79.4
SEGI_39810 Sequoiadendron giganteum HOM05D007682 ORTHO05D009690 8.4e-19 97.8 59 83.1
Gohir.D08G224900 Gossypium hirsutum HOM05D007682 ORTHO05D009690 1.1e-18 97.4 59 84.7
Gorai.007G301900 Gossypium raimondii HOM05D007682 ORTHO05D009690 1.1e-18 97.4 63 79.4
Psat3g011680 Pisum sativum HOM05D007682 ORTHO05D009690 1.1e-18 97.4 71 74.6
TPR.G1619 Trifolium pratense HOM05D007682 ORTHO05D009690 1.1e-18 97.4 71 74.6
Cc02_g34370 Coffea canephora HOM05D007682 ORTHO05D009690 1.4e-18 97.1 59 84.7
Gohir.A08G208100 Gossypium hirsutum HOM05D007682 ORTHO05D009690 1.9e-18 96.7 63 79.4
THA.LOC104818730 Tarenaya hassleriana HOM05D007682 ORTHO05D009690 1.9e-18 96.7 63 77.8
Actinidia21502 Actinidia chinensis HOM05D007682 ORTHO05D009690 2.5e-18 96.3 59 84.7
Manes.08G115600 Manihot esculenta HOM05D007682 ORTHO05D009690 2.5e-18 96.3 100 59.0
Gohir.D11G279700 Gossypium hirsutum HOM05D007682 ORTHO05D009690 3.2e-18 95.9 63 77.8
Medtr7g112600 Medicago truncatula HOM05D007682 ORTHO05D009690 3.2e-18 95.9 59 83.1
GSVIVG01031165001 Vitis vinifera HOM05D000036 ORTHO05D000441 3.2e-18 95.9 59 84.7
Dinv30837 Davidia involucrata HOM05D007682 ORTHO05D009690 4.2e-18 95.5 63 79.4
Gohir.A11G269500 Gossypium hirsutum HOM05D007682 ORTHO05D009690 4.2e-18 95.5 63 77.8
Gorai.004G238900 Gossypium raimondii HOM05D007682 ORTHO05D009690 4.2e-18 95.5 59 83.1
Hma1.2p1_0472F.1_g159680 Hydrangea macrophylla HOM05D007682 ORTHO05D009690 4.2e-18 95.5 63 79.4
Potri.005G023000 Populus trichocarpa HOM05D007682 ORTHO05D009690 4.2e-18 95.5 65 76.9
arahy.Tifrunner.gnm1.ann1.S47DRU Arachis hypogaea HOM05D007682 ORTHO05D009690 5.5e-18 95.1 68 73.5
arahy.Tifrunner.gnm1.ann1.P6132C Arachis hypogaea HOM05D007682 ORTHO05D009690 7.1e-18 94.7 68 73.5
BcaNung04745 Brassica carinata HOM05D007682 ORTHO05D009690 9.3e-18 94.4 59 81.4
AUR62000737 Chenopodium quinoa HOM05D007682 ORTHO05D009690 9.3e-18 94.4 59 81.4
Os12g0516700 Oryza sativa ssp. japonica HOM05D007682 ORTHO05D009690 9.3e-18 94.4 65 70.8
MSTRG.27972 Avicennia marina HOM05D007682 ORTHO05D009690 1.2e-17 94.0 58 81.0
Glyma.03G234200 Glycine max HOM05D007682 ORTHO05D009690 1.2e-17 94.0 67 77.6
Lalb_Chr15g0077471 Lupinus albus HOM05D007682 ORTHO05D009690 1.2e-17 94.0 69 75.4
MD10G1017700 Malus domestica HOM05D007682 ORTHO05D009690 1.6e-17 93.6 59 81.4
SMO367G0406 Selaginella moellendorffii HOM05D007682 ORTHO05D009690 1.6e-17 93.6 77 64.9
FAN15G0817 Fragaria x ananassa HOM05D007682 ORTHO05D009690 2.1e-17 93.2 63 76.2
Sp2g20980 Schrenkiella parvula HOM05D007682 ORTHO05D009690 2.1e-17 93.2 59 81.4
Eucgr.H03256 Eucalyptus grandis HOM05D007682 ORTHO05D009690 2.7e-17 92.8 67 74.6
Os12g0554000 Oryza sativa ssp. japonica HOM05D007682 ORTHO05D009690 2.7e-17 92.8 65 69.2
A06p37270 Brassica napus HOM05D007682 ORTHO05D009690 3.5e-17 92.4 59 79.7
C07p41180 Brassica napus HOM05D007682 ORTHO05D009690 3.5e-17 92.4 59 79.7
BolC7t44646H Brassica oleracea HOM05D007682 ORTHO05D009690 3.5e-17 92.4 59 79.7
BraA06t26650Z Brassica rapa HOM05D007682 ORTHO05D009690 3.5e-17 92.4 59 79.7
CARHR186340 Cardamine hirsuta HOM05D007682 ORTHO05D009690 3.5e-17 92.4 59 81.4
Aa31LG11G9610 Aethionema arabicum HOM05D007682 ORTHO05D009690 4.6e-17 92.0 59 79.7
AUR62005227 Chenopodium quinoa HOM05D007682 ORTHO05D009690 4.6e-17 92.0 59 78.0
CiPaw.08G159600 Carya illinoinensis HOM05D007682 ORTHO05D009690 6.0e-17 91.7 63 76.2
AT5G27860 Arabidopsis thaliana HOM05D007682 ORTHO05D009690 1.0e-16 90.9 59 79.7
QL03p019528 Quercus lobata HOM05D007682 ORTHO05D009690 1.3e-16 90.5 62 74.2
Sed0011876 Sechium edule HOM05D007682 ORTHO05D009690 1.3e-16 90.5 62 74.2
Sc16g0008750 Simmondsia chinensis HOM05D000036 ORTHO05D001038 1.3e-16 90.5 59 79.7
Sabra05G0029000 Salix brachista HOM05D007682 ORTHO05D009690 1.8e-16 90.1 59 79.7
CsaV3_1G038640 Cucumis sativus L. HOM05D007682 ORTHO05D009690 5.1e-16 88.6 59 76.3
TWI56G1223 Tripterygium wilfordii HOM05D007682 ORTHO05D009690 5.1e-16 88.6 59 76.3
Cfa006654 Carpinus fangiana HOM05D007682 ORTHO05D009690 1.1e-15 87.4 63 73.0
Nitab4.5_0003497g0050 Nicotiana tabacum HOM05D007682 ORTHO05D009690 1.9e-15 86.7 66 71.2
Zm00001eb410110 Zea mays HOM05D007682 ORTHO05D009690 7.4e-15 84.7 61 70.5
MBI19_g44105_MAGBIO Magnolia biondii HOM05D007682 ORTHO05D009690 1.3e-14 84.0 54 77.8
ATR0693G225 Amborella trichopoda HOM05D007682 ORTHO05D009690 2.1e-14 83.2 52 80.8
CSS0031357 Camellia sinensis var. sinensis HOM05D007682 ORTHO05D009690 2.1e-14 83.2 66 69.7
Lj1g0016295 Lotus japonicus HOM05D007682 ORTHO05D009690 4.8e-14 82.0 64 71.9
Ah.06g189950 Amaranthus hybridus HOM05D007682 ORTHO05D009690 6.2e-14 81.6 51 80.4
AL6G39080 Arabidopsis lyrata HOM05D007682 ORTHO05D009690 1.1e-13 80.9 59 72.9
EL10Ac4g09894 Beta vulgaris HOM05D007682 ORTHO05D009690 1.1e-13 80.9 51 78.4
HPP92_010684 Vanilla planifolia HOM05D007682 ORTHO05D009690 1.1e-13 80.9 53 81.1
Hund07111 Selenicereus undatus HOM05D007682 ORTHO05D009690 1.4e-13 80.5 85 56.5
unitig_699.g19250 Utricularia gibba HOM05D007682 ORTHO05D009690 2.4e-13 79.7 85 54.1
DCAR_022140 Daucus carota HOM05D007682 ORTHO05D009690 5.3e-13 78.6 55 74.5
MBI19_g47767_MAGBIO Magnolia biondii HOM05D007682 ORTHO05D009690 1.9e-10 70.1 54 70.4
Pp3c11_23030 Physcomitrium patens HOM05D007682 ORTHO05D009690 2.2e-06 56.6 69 49.3
FvH4_2g14440 Fragaria vesca HOM05D007682 ORTHO05D009690 8.2e-06 54.7 36 72.2
VMungo0540G1787 Vigna mungo HOM05D007682 ORTHO05D009690 8.2e-06 54.7 29 89.7


User provided reference genes

Program Settings