Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0340071 Helianthus annuus HOM05D049814 ORTHO05D035127 3.7e-72 275.0 164 100.0
Lsat_1_v5_gn_7_74201 Lactuca sativa HOM05D049814 ORTHO05D035127 2.1e-22 109.8 168 53.6
ECA236G2747 Erigeron canadensis HOM05D000174 ORTHO05D035127 1.6e-14 83.6 172 47.1
Actinidia20459 Actinidia chinensis HOM05D002202 ORTHO05D002176 5.2e-10 68.6 68 48.5
Hma1.2p1_0624F.1_g191240 Hydrangea macrophylla HOM05D000174 ORTHO05D000795 5.2e-10 68.6 65 47.7
Hma1.2p1_0624F.1_g191230 Hydrangea macrophylla HOM05D000174 ORTHO05D000795 3.4e-09 65.9 65 46.2
Hma1.2p1_2442F.1_g322290 Hydrangea macrophylla HOM05D000174 ORTHO05D000795 3.4e-09 65.9 65 46.2
Lj1C441T1 Lonicera japonica HOM05D000174 ORTHO05D000795 3.4e-09 65.9 150 32.7
Eucgr.B02393 Eucalyptus grandis HOM05D000174 ORTHO05D000795 5.8e-09 65.1 69 44.9
Actinidia37236 Actinidia chinensis HOM05D000296 ORTHO05D000175 7.6e-09 64.7 62 45.2
Eucgr.B02392 Eucalyptus grandis HOM05D000174 ORTHO05D000795 1.7e-08 63.5 69 42.0
Lsat_1_v5_gn_9_124521 Lactuca sativa HOM05D000174 ORTHO05D233486 1.7e-08 63.5 58 51.7
Dinv06147 Davidia involucrata HOM05D000174 ORTHO05D000795 2.2e-08 63.2 61 45.9
Dinv32851 Davidia involucrata HOM05D000174 ORTHO05D000795 2.9e-08 62.8 156 41.0
CSS0043600 Camellia sinensis var. sinensis HOM05D000174 ORTHO05D000795 4.9e-08 62.0 58 50.0
Eucgr.B02390 Eucalyptus grandis HOM05D000174 ORTHO05D000795 4.9e-08 62.0 69 40.6
Lsat_1_v5_gn_5_168460 Lactuca sativa HOM05D000174 ORTHO05D000795 4.9e-08 62.0 149 43.6
Lj1g0007550 Lotus japonicus HOM05D000174 ORTHO05D000795 4.9e-08 62.0 157 42.0
Eucgr.B02395 Eucalyptus grandis HOM05D000174 ORTHO05D000795 6.4e-08 61.6 66 42.4
HPP92_012582 Vanilla planifolia HOM05D000174 ORTHO05D000795 6.4e-08 61.6 65 43.1
Atru.chr3.3824 Acer truncatum HOM05D000174 ORTHO05D000795 8.4e-08 61.2 160 30.0
Eucgr.B02396 Eucalyptus grandis HOM05D000174 ORTHO05D000795 8.4e-08 61.2 67 46.3
Eucgr.L02150 Eucalyptus grandis HOM05D000174 ORTHO05D000795 8.4e-08 61.2 67 46.3
Eucgr.B02399 Eucalyptus grandis HOM05D000174 ORTHO05D000795 1.1e-07 60.8 69 42.0
Glyma.20G099100 Glycine max HOM05D000174 ORTHO05D000795 1.1e-07 60.8 61 45.9
Nitab4.5_0000766g0080 Nicotiana tabacum HOM05D000174 ORTHO05D000795 1.1e-07 60.8 168 39.3
Nitab4.5_0009215g0010 Nicotiana tabacum HOM05D000174 ORTHO05D000795 1.1e-07 60.8 71 49.3
Dinv06149 Davidia involucrata HOM05D000174 ORTHO05D000795 1.4e-07 60.5 65 41.5
Eucgr.B02391 Eucalyptus grandis HOM05D000174 ORTHO05D000795 1.4e-07 60.5 69 40.6
Eucgr.B02394 Eucalyptus grandis HOM05D000174 ORTHO05D000795 1.4e-07 60.5 67 46.3
CSS0024322 Camellia sinensis var. sinensis HOM05D000174 ORTHO05D000795 1.9e-07 60.1 150 46.7
Rhsim13G0086500 Rhododendron simsii HOM05D000174 ORTHO05D000795 1.9e-07 60.1 82 42.7
BcaB05g22589 Brassica carinata HOM05D000174 ORTHO05D000795 2.4e-07 59.7 74 40.5
CSS0014863 Camellia sinensis var. sinensis HOM05D000174 ORTHO05D000795 2.4e-07 59.7 151 43.7
TWI31G0028 Tripterygium wilfordii HOM05D000174 ORTHO05D000795 2.4e-07 59.7 60 45.0
C04p38940 Brassica napus HOM05D000174 ORTHO05D000795 3.2e-07 59.3 141 41.8
CSS0022519 Camellia sinensis var. sinensis HOM05D000174 ORTHO05D000795 3.2e-07 59.3 150 46.7
COL.COLO4_18452 Corchorus olitorius HOM05D000174 ORTHO05D000795 3.2e-07 59.3 65 44.6
PSO648G0010 Papaver somniferum HOM05D000174 ORTHO05D000795 3.2e-07 59.3 44 59.1
CSS0043227 Camellia sinensis var. sinensis HOM05D000174 ORTHO05D000795 4.2e-07 58.9 48 56.2
Ciclev10029464m.g Citrus clementina HOM05D000174 ORTHO05D000795 4.2e-07 58.9 60 51.7
Duzib170G1045 Durio zibethinus HOM05D000174 ORTHO05D000795 4.2e-07 58.9 63 46.0
Lsat_1_v5_gn_5_168420 Lactuca sativa HOM05D000174 ORTHO05D000795 4.2e-07 58.9 70 44.3
Medtr7g023560 Medicago truncatula HOM05D000174 ORTHO05D000795 4.2e-07 58.9 60 41.7
TAR633G0517 Trochodendron aralioides HOM05D000174 ORTHO05D000795 4.2e-07 58.9 148 42.6
Nitab4.5_0000888g0020 Nicotiana tabacum HOM05D000174 ORTHO05D000795 5.4e-07 58.5 78 46.2
Rhsim13G0086600 Rhododendron simsii HOM05D000174 ORTHO05D000795 5.4e-07 58.5 62 46.8
DCAR_015606 Daucus carota HOM05D000174 ORTHO05D000795 7.1e-07 58.2 62 40.3
Nn2g10467 Nelumbo nucifera HOM05D000174 ORTHO05D000795 7.1e-07 58.2 61 37.7
BraA02t05760Z Brassica rapa HOM05D000174 ORTHO05D000795 9.3e-07 57.8 74 39.2
Eucgr.B02398 Eucalyptus grandis HOM05D000174 ORTHO05D000795 9.3e-07 57.8 66 42.4
BcaB08g36217 Brassica carinata HOM05D000174 ORTHO05D000795 1.2e-06 57.4 76 38.2
BcaC04g19637 Brassica carinata HOM05D000174 ORTHO05D000795 1.2e-06 57.4 76 38.2
C09p52340 Brassica napus HOM05D000174 ORTHO05D000795 1.2e-06 57.4 76 38.2
BolC9t58101H Brassica oleracea HOM05D000174 ORTHO05D000795 1.2e-06 57.4 76 38.2
Eucgr.B02397 Eucalyptus grandis HOM05D000174 ORTHO05D000795 1.2e-06 57.4 61 44.3
Glyma.02G094500 Glycine max HOM05D000174 ORTHO05D000795 1.2e-06 57.4 61 39.3
Lj1C441T0 Lonicera japonica HOM05D000174 ORTHO05D000795 1.2e-06 57.4 71 42.3
Solyc06g075775.1 Solanum lycopersicum HOM05D000174 ORTHO05D000795 1.2e-06 57.4 61 44.3
vmacro03110 Vaccinium macrocarpon HOM05D000174 ORTHO05D000795 1.2e-06 57.4 62 41.9
BolC2t07310H Brassica oleracea HOM05D000174 ORTHO05D000795 1.6e-06 57.0 74 39.2
BolC2t07312H Brassica oleracea HOM05D000174 ORTHO05D000795 1.6e-06 57.0 74 39.2
DCAR_018891 Daucus carota HOM05D000174 ORTHO05D000795 1.6e-06 57.0 50 50.0
Manes.11G134100 Manihot esculenta HOM05D000174 ORTHO05D000795 1.6e-06 57.0 65 41.5
QL01p033185 Quercus lobata HOM05D000174 ORTHO05D000795 1.6e-06 57.0 68 39.7
SGA_v2.0_scaffold2G01006 Striga asiatica HOM05D000174 ORTHO05D000795 1.6e-06 57.0 66 39.4
CARHR163530 Cardamine hirsuta HOM05D000174 ORTHO05D000795 2.1e-06 56.6 57 43.9
DCAR_015605 Daucus carota HOM05D000174 ORTHO05D000795 2.1e-06 56.6 62 40.3
Glyma.18G287200 Glycine max HOM05D000174 ORTHO05D000795 2.1e-06 56.6 70 38.6
Medtr2g096540 Medicago truncatula HOM05D000174 ORTHO05D000795 2.1e-06 56.6 49 53.1
Psat3g184280 Pisum sativum HOM05D000174 ORTHO05D000795 2.1e-06 56.6 68 39.7
QL07p046722 Quercus lobata HOM05D000174 ORTHO05D000795 2.1e-06 56.6 159 41.5
BcaB05g22588 Brassica carinata HOM05D000174 ORTHO05D000795 2.7e-06 56.2 70 42.9
Duzib168G0948 Durio zibethinus HOM05D000174 ORTHO05D000795 2.7e-06 56.2 73 42.5
HanXRQChr01g0009821 Helianthus annuus HOM05D000174 ORTHO05D000795 2.7e-06 56.2 67 44.8
HanXRQChr10g0304461 Helianthus annuus HOM05D000174 ORTHO05D000795 2.7e-06 56.2 67 46.3
Lsat_1_v5_gn_8_77560 Lactuca sativa HOM05D000174 ORTHO05D000795 2.7e-06 56.2 61 44.3
BcaC01g06545 Brassica carinata HOM05D000174 ORTHO05D000795 3.5e-06 55.8 72 41.7
A02p06830 Brassica napus HOM05D000174 ORTHO05D000795 3.5e-06 55.8 75 41.3
C02p12120 Brassica napus HOM05D000174 ORTHO05D000795 3.5e-06 55.8 75 41.3
BolC2t07311H Brassica oleracea HOM05D000174 ORTHO05D000795 3.5e-06 55.8 74 39.2
BolC3t13790H Brassica oleracea HOM05D000174 ORTHO05D000795 3.5e-06 55.8 72 41.7
BraA02t05761Z Brassica rapa HOM05D000174 ORTHO05D000795 3.5e-06 55.8 75 41.3
FvH4_3g35050 Fragaria vesca HOM05D000174 ORTHO05D000795 3.5e-06 55.8 45 53.3
FAN11G3736 Fragaria x ananassa HOM05D000174 ORTHO05D000795 3.5e-06 55.8 45 53.3
Glyma.10G290200 Glycine max HOM05D000174 ORTHO05D000795 3.5e-06 55.8 76 38.2
HanXRQChr06g0175911 Helianthus annuus HOM05D000174 ORTHO05D000795 3.5e-06 55.8 63 46.0
Lj1C158G11 Lonicera japonica HOM05D000174 ORTHO05D000795 3.5e-06 55.8 71 40.8
Lj1C158T10 Lonicera japonica HOM05D000174 ORTHO05D000795 3.5e-06 55.8 74 39.2
Lj2P118T21 Lonicera japonica HOM05D000174 ORTHO05D001106 3.5e-06 55.8 47 51.1
Phvul.008G014600 Phaseolus vulgaris HOM05D000174 ORTHO05D000795 3.5e-06 55.8 67 40.3
Sed0021227 Sechium edule HOM05D000174 ORTHO05D001106 3.5e-06 55.8 40 60.0
VMungo1383G0741 Vigna mungo HOM05D000174 ORTHO05D000795 3.5e-06 55.8 59 39.0
Aa31LG5G7950 Aethionema arabicum HOM05D000174 ORTHO05D001106 4.6e-06 55.5 63 42.9
Aqoxy2G02024 Aquilegia oxysepala HOM05D000174 ORTHO05D000795 4.6e-06 55.5 80 37.5
CAN.G532.39 Capsicum annuum HOM05D015322 ORTHO05D017755 4.6e-06 55.5 69 40.6
Duzib150G0324 Durio zibethinus HOM05D000174 ORTHO05D000795 4.6e-06 55.5 73 39.7
Glyma.10G197200 Glycine max HOM05D000174 ORTHO05D001106 4.6e-06 55.5 58 39.7
Gohir.A03G038900 Gossypium hirsutum HOM05D000174 ORTHO05D000795 4.6e-06 55.5 54 44.4
Gohir.D03G129500 Gossypium hirsutum HOM05D000174 ORTHO05D000795 4.6e-06 55.5 54 44.4
Gorai.003G136200 Gossypium raimondii HOM05D000174 ORTHO05D000795 4.6e-06 55.5 54 44.4
Nn2g12894 Nelumbo nucifera HOM05D000174 ORTHO05D000795 4.6e-06 55.5 63 36.5
PSO648G0081 Papaver somniferum HOM05D000174 ORTHO05D001106 4.6e-06 55.5 35 60.0
QL07p046764 Quercus lobata HOM05D000174 ORTHO05D000795 4.6e-06 55.5 67 40.3
QL07p047053 Quercus lobata HOM05D000174 ORTHO05D000795 4.6e-06 55.5 67 40.3
TPR.G34258 Trifolium pratense HOM05D000174 ORTHO05D000795 4.6e-06 55.5 51 49.0
TWI79G0493 Tripterygium wilfordii HOM05D000174 ORTHO05D000795 4.6e-06 55.5 135 40.0
VMungo0720G1245 Vigna mungo HOM05D000174 ORTHO05D000795 4.6e-06 55.5 67 43.3
Cfa011449 Carpinus fangiana HOM05D000174 ORTHO05D000795 6.0e-06 55.1 64 39.1
Glyma.19G174100 Glycine max HOM05D000174 ORTHO05D000795 6.0e-06 55.1 78 34.6
Nitab4.5_0012883g0010 Nicotiana tabacum HOM05D000174 ORTHO05D000795 6.0e-06 55.1 69 43.5
PSO339G2233 Papaver somniferum HOM05D000174 ORTHO05D000795 6.0e-06 55.1 35 60.0
QL07p046754 Quercus lobata HOM05D000174 ORTHO05D000795 6.0e-06 55.1 154 40.9
QL93p0124_0005 Quercus lobata HOM05D000174 ORTHO05D000795 6.0e-06 55.1 154 40.9
TAR636G1715 Trochodendron aralioides HOM05D000174 ORTHO05D000795 6.0e-06 55.1 63 39.7
A02p06820 Brassica napus HOM05D000174 ORTHO05D000795 7.8e-06 54.7 74 37.8
C02p12110 Brassica napus HOM05D000174 ORTHO05D000795 7.8e-06 54.7 74 37.8
HanXRQChr02g0031591 Helianthus annuus HOM05D000174 ORTHO05D000795 7.8e-06 54.7 54 46.3
Lsat_1_v5_gn_8_16081 Lactuca sativa HOM05D000174 ORTHO05D000795 7.8e-06 54.7 143 44.8
MBI14_g43764_MAGBIO Magnolia biondii HOM05D000174 ORTHO05D000795 7.8e-06 54.7 151 39.7
PSO339G5484 Papaver somniferum HOM05D000174 ORTHO05D000795 7.8e-06 54.7 34 61.8
PSO648G0027 Papaver somniferum HOM05D000174 ORTHO05D000795 7.8e-06 54.7 45 53.3
QL07p046747 Quercus lobata HOM05D000174 ORTHO05D000795 7.8e-06 54.7 68 41.2


User provided reference genes

Program Settings