Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0339791 Helianthus annuus HOM05D008113 ORTHO05D009793 1.7e-78 296.2 184 100.0
ECA233G2707 Erigeron canadensis HOM05D008113 ORTHO05D009793 2.1e-36 156.4 193 54.9
CSS0012952 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 3.3e-13 79.3 213 32.9
CSS0027769 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 3.3e-13 79.3 213 32.9
Rhsim07G0126900 Rhododendron simsii HOM05D008113 ORTHO05D009793 4.8e-12 75.5 200 35.5
CiPaw.11G093400 Carya illinoinensis HOM05D008113 ORTHO05D009793 5.3e-11 72.0 202 34.7
Dinv28958 Davidia involucrata HOM05D008113 ORTHO05D009793 2.0e-10 70.1 210 31.4
QL12p005179 Quercus lobata HOM05D008113 ORTHO05D009793 2.0e-10 70.1 204 32.4
Actinidia09200 Actinidia chinensis HOM05D008113 ORTHO05D009793 4.5e-10 68.9 195 35.4
MSTRG.1985 Avicennia marina HOM05D008113 ORTHO05D009793 7.7e-10 68.2 171 33.9
Rhsim07G0125800 Rhododendron simsii HOM05D008113 ORTHO05D009793 7.7e-10 68.2 184 35.9
DCAR_008271 Daucus carota HOM05D008113 ORTHO05D009793 8.5e-09 64.7 200 34.0
Sc22g0001540 Simmondsia chinensis HOM05D008113 ORTHO05D009793 2.5e-08 63.2 179 34.6
PGSC0003DMG400001153 Solanum tuberosum HOM05D023668 ORTHO05D009793 2.5e-08 63.2 186 39.8
VMungo1215G1592 Vigna mungo HOM05D008113 ORTHO05D009793 5.5e-08 62.0 171 32.7
Atru.chr6.1709 Acer truncatum HOM05D008113 ORTHO05D009793 7.2e-08 61.6 210 32.9
Migut.E00933 Erythranthe guttata HOM05D008113 ORTHO05D009793 1.2e-07 60.8 166 34.3
Cfa012440 Carpinus fangiana HOM05D008113 ORTHO05D009793 1.6e-07 60.5 204 29.9
SGA_v2.0_scaffold20G09258 Striga asiatica HOM05D008113 ORTHO05D009793 1.6e-07 60.5 162 30.9
MELO3C003410.2 Cucumis melo HOM05D008113 ORTHO05D009793 3.6e-07 59.3 176 29.5
CSS0025106 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 8.0e-07 58.2 198 29.3
CsaV3_3G049170 Cucumis sativus L. HOM05D008113 ORTHO05D009793 8.0e-07 58.2 194 29.9
Phvul.002G141700 Phaseolus vulgaris HOM05D008113 ORTHO05D009793 8.0e-07 58.2 171 32.7
Manes.17G015710 Manihot esculenta HOM05D008113 ORTHO05D009793 1.0e-06 57.8 213 30.0
Actinidia09205 Actinidia chinensis HOM05D008113 ORTHO05D009793 5.2e-06 55.5 140 35.0
unitig_22.g5500 Utricularia gibba HOM05D008113 ORTHO05D009793 5.2e-06 55.5 162 33.3
Thecc.03G227800 Theobroma cacao HOM05D008113 ORTHO05D009793 8.8e-06 54.7 202 29.7


User provided reference genes

Program Settings