Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0339001 Helianthus annuus HOM05D005534 ORTHO05D006642 2.0e-43 178.7 92 100.0
ECA234G3974 Erigeron canadensis HOM05D005534 ORTHO05D006642 1.1e-17 93.2 55 78.2
Lsat_1_v5_gn_5_78481 Lactuca sativa HOM05D005534 ORTHO05D006642 1.9e-17 92.4 55 81.8
Oeu034751.1 Olea europaea HOM05D005534 ORTHO05D006642 1.6e-16 89.4 55 80.0
Oeu034752.2 Olea europaea HOM05D005534 ORTHO05D006642 1.6e-16 89.4 55 80.0
Lj1A297G57 Lonicera japonica HOM05D005534 ORTHO05D006642 2.8e-16 88.6 55 80.0
Lj1A290T42 Lonicera japonica HOM05D005534 ORTHO05D006642 3.6e-16 88.2 56 80.4
Nn1g07947 Nelumbo nucifera HOM05D005534 ORTHO05D006642 4.7e-16 87.8 55 78.2
CDE02G4760 Ceratophyllum demersum HOM05D005534 ORTHO05D006642 8.0e-16 87.0 55 74.5
Cc00_g25290 Coffea canephora HOM05D005534 ORTHO05D006642 8.0e-16 87.0 55 76.4
Nitab4.5_0006008g0020 Nicotiana tabacum HOM05D005534 ORTHO05D006642 8.0e-16 87.0 55 74.5
Ciclev10020832m.g Citrus clementina HOM05D005534 ORTHO05D006642 1.4e-15 86.3 55 76.4
MD15G1399100 Malus domestica HOM05D005534 ORTHO05D006642 1.8e-15 85.9 62 69.4
Peaxi162Scf00065g00017 Petunia axillaris HOM05D005534 ORTHO05D006642 1.8e-15 85.9 55 72.7
AL1G36350 Arabidopsis lyrata HOM05D005534 ORTHO05D006642 2.3e-15 85.5 79 58.2
Dinv18373 Davidia involucrata HOM05D005534 ORTHO05D006642 2.3e-15 85.5 55 76.4
Nitab4.5_0000731g0130 Nicotiana tabacum HOM05D005534 ORTHO05D006642 2.3e-15 85.5 55 72.7
CARHR023160 Cardamine hirsuta HOM05D005534 ORTHO05D006642 3.0e-15 85.1 79 57.0
AUR62026718 Chenopodium quinoa HOM05D005534 ORTHO05D006642 3.0e-15 85.1 55 74.5
RcHm_v2.0_Chr7g0231231 Rosa chinensis HOM05D005534 ORTHO05D006642 3.0e-15 85.1 55 74.5
Solyc10g012160.3 Solanum lycopersicum HOM05D005534 ORTHO05D006642 3.0e-15 85.1 55 72.7
Sopen10g005920 Solanum pennellii HOM05D005534 ORTHO05D006642 3.0e-15 85.1 55 72.7
PGSC0003DMG401019416 Solanum tuberosum HOM05D005534 ORTHO05D006642 3.0e-15 85.1 55 72.7
SGA_v2.0_scaffold69G23189 Striga asiatica HOM05D005534 ORTHO05D006642 3.0e-15 85.1 95 55.8
CANSAT25G1380 Cannabis sativa HOM05D005534 ORTHO05D006642 4.0e-15 84.7 55 72.7
Migut.J01545 Erythranthe guttata HOM05D005534 ORTHO05D006642 4.0e-15 84.7 55 76.4
Potri.013G101700 Populus trichocarpa HOM05D005534 ORTHO05D006642 4.0e-15 84.7 55 74.5
Sc19g0002770 Simmondsia chinensis HOM05D005534 ORTHO05D006642 4.0e-15 84.7 55 74.5
AT1G22800 Arabidopsis thaliana HOM05D005534 ORTHO05D006642 5.2e-15 84.3 79 57.0
BcaNung06107 Brassica carinata HOM05D005534 ORTHO05D006642 5.2e-15 84.3 79 57.0
Cpa.g.sc438.5 Carica papaya HOM05D005534 ORTHO05D006642 5.2e-15 84.3 55 70.9
Eucgr.F04073 Eucalyptus grandis HOM05D005534 ORTHO05D006642 5.2e-15 84.3 53 77.4
MD04G1240000 Malus domestica HOM05D005534 ORTHO05D006642 5.2e-15 84.3 62 67.7
PGR044G1073 Punica granatum HOM05D005534 ORTHO05D006642 5.2e-15 84.3 53 77.4
Sp1g20290 Schrenkiella parvula HOM05D005534 ORTHO05D006642 5.2e-15 84.3 79 57.0
THA.LOC104800087 Tarenaya hassleriana HOM05D005534 ORTHO05D006642 5.2e-15 84.3 55 70.9
Atru.chr13.2420 Acer truncatum HOM05D005534 ORTHO05D006642 6.8e-15 84.0 55 72.7
CSS0044704 Camellia sinensis var. sinensis HOM05D005534 ORTHO05D006642 6.8e-15 84.0 55 74.5
Thhalv10007396m.g Eutrema salsugineum HOM05D005534 ORTHO05D006642 6.8e-15 84.0 79 55.7
Prupe.1G530500 Prunus persica HOM05D005534 ORTHO05D006642 6.8e-15 84.0 62 66.1
MSTRG.6297 Avicennia marina HOM05D005534 ORTHO05D006642 8.8e-15 83.6 55 74.5
CAN.G911.34 Capsicum annuum HOM05D005534 ORTHO05D006642 8.8e-15 83.6 55 70.9
SalBow6G6434 Salvia bowleyana HOM05D005534 ORTHO05D006642 8.8e-15 83.6 55 72.7
TWI18G0032 Tripterygium wilfordii HOM05D005534 ORTHO05D006642 8.8e-15 83.6 55 72.7
Gohir.D13G120700 Gossypium hirsutum HOM05D005534 ORTHO05D006642 1.2e-14 83.2 55 70.9
Sabra13G0088100 Salix brachista HOM05D005534 ORTHO05D006642 1.2e-14 83.2 55 72.7
TAR381G0138 Trochodendron aralioides HOM05D005534 ORTHO05D006642 1.2e-14 83.2 55 72.7
HPP92_005621 Vanilla planifolia HOM05D005534 ORTHO05D006642 1.2e-14 83.2 55 72.7
HPP92_005624 Vanilla planifolia HOM05D005534 ORTHO05D006642 1.2e-14 83.2 55 72.7
BcaNung06443 Brassica carinata HOM05D005534 ORTHO05D006642 1.5e-14 82.8 79 55.7
ClCG08G000650 Citrullus lanatus HOM05D005534 ORTHO05D006642 1.5e-14 82.8 55 69.1
DCAR_022334 Daucus carota HOM05D005534 ORTHO05D006642 1.5e-14 82.8 51 80.4
Gorai.013G134900 Gossypium raimondii HOM05D005534 ORTHO05D006642 1.5e-14 82.8 88 51.1
Hma1.2p1_0708F.1_g207140 Hydrangea macrophylla HOM05D005534 ORTHO05D006642 1.5e-14 82.8 55 72.7
Rhsim12G0004300 Rhododendron simsii HOM05D005534 ORTHO05D006642 1.5e-14 82.8 55 72.7
vmacro00924 Vaccinium macrocarpon HOM05D005534 ORTHO05D006642 1.5e-14 82.8 55 72.7
Carub.0001s2231 Capsella rubella HOM05D005534 ORTHO05D006642 2.0e-14 82.4 55 70.9
FvH4_5g33060 Fragaria vesca HOM05D005534 ORTHO05D006642 2.0e-14 82.4 55 70.9
FAN18G2794 Fragaria x ananassa HOM05D005534 ORTHO05D006642 2.0e-14 82.4 55 70.9
Hund26700 Selenicereus undatus HOM05D005534 ORTHO05D006642 2.0e-14 82.4 55 70.9
CsaV3_5G040210 Cucumis sativus L. HOM05D005534 ORTHO05D006642 2.6e-14 82.0 55 69.1
Duzib177G1161 Durio zibethinus HOM05D005534 ORTHO05D006642 2.6e-14 82.0 55 69.1
Duzib177G1179 Durio zibethinus HOM05D005534 ORTHO05D006642 2.6e-14 82.0 55 69.1
MD08G1215200 Malus domestica HOM05D005534 ORTHO05D006642 2.6e-14 82.0 62 66.1
QL09p002970 Quercus lobata HOM05D005534 ORTHO05D006642 2.6e-14 82.0 55 70.9
QL09p004039 Quercus lobata HOM05D005534 ORTHO05D006642 2.6e-14 82.0 55 70.9
EL10Ac1g01529 Beta vulgaris HOM05D005534 ORTHO05D006642 3.4e-14 81.6 55 70.9
Aqoxy2G03821 Aquilegia oxysepala HOM05D005534 ORTHO05D006642 4.4e-14 81.3 55 70.9
CiPaw.04G011000 Carya illinoinensis HOM05D005534 ORTHO05D006642 4.4e-14 81.3 55 69.1
Zm00001eb411080 Zea mays HOM05D005534 ORTHO05D006642 4.4e-14 81.3 55 70.9
Glyma.04G257200 Glycine max HOM05D005534 ORTHO05D006642 5.7e-14 80.9 55 69.1
Glyma.12G242500 Glycine max HOM05D005534 ORTHO05D006642 5.7e-14 80.9 55 69.1
unitig_899.g15650 Utricularia gibba HOM05D005534 ORTHO05D006642 5.7e-14 80.9 55 69.1
GSVIVG01036434001 Vitis vinifera HOM05D005534 ORTHO05D006642 5.7e-14 80.9 55 69.1
COL.COLO4_05589 Corchorus olitorius HOM05D005534 ORTHO05D006642 7.5e-14 80.5 55 67.3
Manes.18G119700 Manihot esculenta HOM05D005534 ORTHO05D006642 7.5e-14 80.5 55 69.1
SHI08987 Sapria himalayana HOM05D005534 ORTHO05D006642 7.5e-14 80.5 55 67.3
Gohir.A13G117400 Gossypium hirsutum HOM05D005534 ORTHO05D006642 9.8e-14 80.1 51 74.5
MBI06_g06677_MAGBIO Magnolia biondii HOM05D005534 ORTHO05D006642 9.8e-14 80.1 55 69.1
Medtr3g005730 Medicago truncatula HOM05D005534 ORTHO05D006642 9.8e-14 80.1 55 69.1
TPR.G25542 Trifolium pratense HOM05D005534 ORTHO05D006642 9.8e-14 80.1 55 69.1
Psat1g000160 Pisum sativum HOM05D005534 ORTHO05D006642 1.3e-13 79.7 55 69.1
vmacro22753 Vaccinium macrocarpon HOM05D005534 ORTHO05D006642 1.3e-13 79.7 52 75.0
Phvul.005G001600 Phaseolus vulgaris HOM05D005534 ORTHO05D006642 1.7e-13 79.3 55 67.3
VMungo1080G0932 Vigna mungo HOM05D005534 ORTHO05D006642 1.7e-13 79.3 55 67.3
Thecc.08G173200 Theobroma cacao HOM05D005534 ORTHO05D006642 2.2e-13 79.0 55 65.5
arahy.Tifrunner.gnm1.ann1.A8RPUL Arachis hypogaea HOM05D005534 ORTHO05D006642 2.8e-13 78.6 55 67.3
arahy.Tifrunner.gnm1.ann1.H1ATJ8 Arachis hypogaea HOM05D005534 ORTHO05D006642 2.8e-13 78.6 55 67.3
Haze_13929 Corylus avellana HOM05D005534 ORTHO05D006642 4.9e-13 77.8 66 63.6
PSO017G6214 Papaver somniferum HOM05D005534 ORTHO05D006642 4.9e-13 77.8 55 69.1
Actinidia23022 Actinidia chinensis HOM05D005534 ORTHO05D006642 8.3e-13 77.0 59 66.1
Lalb_Chr07g0177551 Lupinus albus HOM05D005534 ORTHO05D006642 8.3e-13 77.0 55 65.5
Lj3g0019199 Lotus japonicus HOM05D005534 ORTHO05D006642 1.1e-12 76.6 55 67.3
PSO170G0367 Papaver somniferum HOM05D005534 ORTHO05D006642 1.1e-12 76.6 54 68.5
SMO232G0033 Selaginella moellendorffii HOM05D005534 ORTHO05D006642 1.1e-12 76.6 55 67.3
Ca_13980_v3 Cicer arietinum L. HOM05D005534 ORTHO05D006642 1.4e-12 76.3 51 72.5
HPP92_005612 Vanilla planifolia HOM05D005534 ORTHO05D006642 1.4e-12 76.3 58 67.2
BcaC06g34996 Brassica carinata HOM05D005534 ORTHO05D006642 1.8e-12 75.9 88 50.0
C07p20870 Brassica napus HOM05D005534 ORTHO05D006642 1.8e-12 75.9 88 50.0
BolC7t42620H Brassica oleracea HOM05D005534 ORTHO05D006642 1.8e-12 75.9 88 50.0
A09p41950 Brassica napus HOM05D005534 ORTHO05D006642 2.4e-12 75.5 91 49.5
Mapoly0125s0040 Marchantia polymorpha HOM05D005534 ORTHO05D006642 5.4e-12 74.3 55 67.3
Gohir.A13G117500 Gossypium hirsutum HOM05D005534 ORTHO05D006642 2.0e-11 72.4 50 74.0
Pp3c3_32560 Physcomitrium patens HOM05D005534 ORTHO05D006642 1.0e-10 70.1 55 58.2
BraA09t39683Z Brassica rapa HOM05D005534 ORTHO05D006642 2.3e-10 68.9 62 59.7
CBR_g29440 Chara braunii HOM05D000921 ORTHO05D004153 2.3e-10 68.9 55 56.4
BolC5t30885H Brassica oleracea HOM05D005534 ORTHO05D006642 5.0e-10 67.8 81 50.6
A07p14190 Brassica napus HOM05D005534 ORTHO05D006642 7.3e-09 63.9 56 60.7
MELO3C022197.2 Cucumis melo HOM05D005534 ORTHO05D006642 6.8e-07 57.4 33 78.8
Aa31LG7G6790 Aethionema arabicum HOM05D005534 ORTHO05D006642 1.5e-06 56.2 66 50.0
AUR62013571 Chenopodium quinoa HOM05D005534 ORTHO05D006642 2.6e-06 55.5 33 75.8


User provided reference genes

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