Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0338441 Helianthus annuus HOM05D007621 ORTHO05D009631 0.0e+00 1238.0 602 100.0
ECA248G3190 Erigeron canadensis HOM05D007621 ORTHO05D009631 2.3e-212 742.7 674 61.1
Lsat_1_v5_gn_1_126820 Lactuca sativa HOM05D007621 ORTHO05D009631 6.5e-199 698.0 564 65.6
GSVIVG01003190001 Vitis vinifera HOM05D007621 ORTHO05D009631 3.7e-170 602.4 569 56.4
CSS0049226 Camellia sinensis var. sinensis HOM05D007621 ORTHO05D009631 7.0e-169 598.2 533 57.6
Actinidia11809 Actinidia chinensis HOM05D007621 ORTHO05D009631 9.1e-169 597.8 422 67.8
TAR624G0533 Trochodendron aralioides HOM05D007621 ORTHO05D009631 2.7e-168 596.3 439 65.4
Dinv40478 Davidia involucrata HOM05D007621 ORTHO05D009631 5.5e-166 588.6 486 60.7
TWI38G0795 Tripterygium wilfordii HOM05D007621 ORTHO05D009631 3.6e-165 585.9 408 67.6
Lj1C1213T4 Lonicera japonica HOM05D007621 ORTHO05D009631 1.8e-164 583.6 619 52.5
Rhsim02G0119600 Rhododendron simsii HOM05D007621 ORTHO05D009631 1.8e-164 583.6 586 53.9
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 4.0e-164 582.4 564 55.3
Hma1.2p1_1182F.1_g264810 Hydrangea macrophylla HOM05D007621 ORTHO05D009631 8.8e-164 581.3 650 50.8
ClCG03G005520 Citrullus lanatus HOM05D007621 ORTHO05D009631 1.5e-163 580.5 445 62.7
Haze_06574 Corylus avellana HOM05D007621 ORTHO05D009631 2.6e-163 579.7 511 57.7
Cc02_g12430 Coffea canephora HOM05D007621 ORTHO05D009631 8.3e-162 574.7 443 63.4
QL04p018250 Quercus lobata HOM05D007621 ORTHO05D009631 1.4e-161 573.9 613 51.7
Nitab4.5_0006573g0020 Nicotiana tabacum HOM05D007621 ORTHO05D009631 1.8e-161 573.5 595 52.9
Nitab4.5_0000190g0070 Nicotiana tabacum HOM05D007621 ORTHO05D009631 5.4e-161 572.0 588 53.4
Sc14g0001480 Simmondsia chinensis HOM05D007621 ORTHO05D009631 7.0e-161 571.6 435 64.4
CDE12G0841 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 9.2e-161 571.2 409 67.2
MSTRG.14678 Avicennia marina HOM05D007621 ORTHO05D009631 1.2e-160 570.9 510 56.5
SalBow7G3398 Salvia bowleyana HOM05D007621 ORTHO05D009631 2.9e-159 566.2 434 62.4
ATR0693G363 Amborella trichopoda HOM05D007621 ORTHO05D009631 3.8e-159 565.8 408 64.7
CAN.G424.15 Capsicum annuum HOM05D007621 ORTHO05D009631 6.6e-159 565.1 603 50.9
Lj6g0025549 Lotus japonicus HOM05D007621 ORTHO05D009631 8.6e-159 564.7 407 64.4
Nn1g03894 Nelumbo nucifera HOM05D007621 ORTHO05D009631 1.5e-158 563.9 587 51.1
PGR042G2283 Punica granatum HOM05D007621 ORTHO05D009631 1.5e-158 563.9 613 51.1
SalBow7G0238 Salvia bowleyana HOM05D007621 ORTHO05D009631 1.5e-158 563.9 434 62.2
MELO3C002556.2 Cucumis melo HOM05D007621 ORTHO05D009631 1.9e-158 563.5 440 62.5
Manes.16G020600 Manihot esculenta HOM05D007621 ORTHO05D009631 1.9e-158 563.5 409 65.3
Sopen02g023940 Solanum pennellii HOM05D007621 ORTHO05D009631 1.9e-158 563.5 417 64.5
CsaV3_1G011790 Cucumis sativus L. HOM05D007621 ORTHO05D009631 3.3e-158 562.8 440 62.5
Sed0011037 Sechium edule HOM05D007621 ORTHO05D009631 4.3e-158 562.4 409 64.1
Solyc02g079140.2 Solanum lycopersicum HOM05D007621 ORTHO05D009631 4.3e-158 562.4 463 59.6
FvH4_3g03980 Fragaria vesca HOM05D007621 ORTHO05D009631 1.2e-157 560.8 610 49.8
RcHm_v2.0_Chr5g0006311 Rosa chinensis HOM05D007621 ORTHO05D009631 1.2e-157 560.8 677 47.6
Glyma.15G067500 Glycine max HOM05D007621 ORTHO05D009631 2.1e-157 560.1 531 55.0
VMungo0540G1980 Vigna mungo HOM05D007621 ORTHO05D009631 2.8e-157 559.7 405 65.9
Peaxi162Scf00083g00022 Petunia axillaris HOM05D007621 ORTHO05D009631 1.0e-156 557.8 595 50.9
SGA_v2.0_scaffold49G18280 Striga asiatica HOM05D007621 ORTHO05D009631 1.0e-156 557.8 564 53.2
Ciclev10014484m.g Citrus clementina HOM05D007621 ORTHO05D009631 2.3e-156 556.6 409 64.8
PGSC0003DMG400022357 Solanum tuberosum HOM05D007621 ORTHO05D009631 3.0e-156 556.2 640 47.3
FAN11G2677 Fragaria x ananassa HOM05D007621 ORTHO05D009631 1.2e-155 554.3 599 50.4
CDE01G0329 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 5.7e-155 552.0 409 65.5
MD05G1325500 Malus domestica HOM05D007621 ORTHO05D009631 3.7e-154 549.3 602 51.5
Psat1g208720 Pisum sativum HOM05D007621 ORTHO05D009631 1.1e-153 547.7 468 58.8
HPP92_005890 Vanilla planifolia HOM05D007621 ORTHO05D009631 1.8e-153 547.0 508 55.5
Eucgr.E03798 Eucalyptus grandis HOM05D007621 ORTHO05D009631 5.4e-153 545.4 451 59.2
AUR62014718 Chenopodium quinoa HOM05D007621 ORTHO05D009631 9.2e-153 544.7 438 62.6
AUR62016897 Chenopodium quinoa HOM05D007621 ORTHO05D009631 7.8e-152 541.6 467 59.7
Prupe.4G036900 Prunus persica HOM05D007621 ORTHO05D009631 1.3e-151 540.8 446 60.1
Ca_00253_v3 Cicer arietinum L. HOM05D007621 ORTHO05D009631 3.0e-151 539.7 445 60.4
Zm00001eb069260 Zea mays HOM05D007621 ORTHO05D009631 3.9e-151 539.3 433 60.7
Cfa000351 Carpinus fangiana HOM05D007621 ORTHO05D009631 1.1e-150 537.7 596 49.8
EL10Ac8g20530 Beta vulgaris HOM05D007621 ORTHO05D009631 1.9e-150 537.0 551 52.3
CDE01G0148 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 3.3e-150 536.2 393 65.6
SEGI_29793 Sequoiadendron giganteum HOM05D007621 ORTHO05D009631 6.2e-149 531.9 446 58.5
Os04g0636000 Oryza sativa ssp. japonica HOM05D007621 ORTHO05D009631 3.5e-144 516.2 413 60.0
TPR.G36840 Trifolium pratense HOM05D007621 ORTHO05D009631 6.6e-143 511.9 482 55.2
arahy.Tifrunner.gnm1.ann1.M1GH8V Arachis hypogaea HOM05D007621 ORTHO05D009631 8.6e-143 511.5 537 50.1
FAN16G2797 Fragaria x ananassa HOM05D007621 ORTHO05D009631 1.1e-142 511.1 670 45.8
Phvul.006G192200 Phaseolus vulgaris HOM05D007621 ORTHO05D009631 7.5e-139 498.4 415 59.5
PGR042G3240 Punica granatum HOM05D007621 ORTHO05D009631 3.7e-138 496.1 415 59.3
arahy.Tifrunner.gnm1.ann1.14L1JV Arachis hypogaea HOM05D007621 ORTHO05D009631 1.4e-137 494.2 589 46.5
Mapoly0104s0019 Marchantia polymorpha HOM05D007621 ORTHO05D009631 1.5e-134 484.2 409 57.5
Hund23606 Selenicereus undatus HOM05D007621 ORTHO05D009631 6.6e-127 458.8 351 64.4
Zm00001eb081180 Zea mays HOM05D007621 ORTHO05D009631 9.6e-118 428.3 351 59.5
Thecc.06G199600 Theobroma cacao HOM05D007621 ORTHO05D009631 4.9e-106 389.4 399 49.9
CBR_g725 Chara braunii HOM05D007621 ORTHO05D009631 6.4e-106 389.0 453 43.9
Aqoxy1G02733 Aquilegia oxysepala HOM05D007621 ORTHO05D009631 1.8e-100 370.9 288 63.9
Eucgr.E03700 Eucalyptus grandis HOM05D007621 ORTHO05D009631 3.9e-95 353.2 289 60.2
Zm00001eb274720 Zea mays HOM05D007621 ORTHO05D009631 1.1e-86 325.1 251 62.2
CiPaw.09G157900 Carya illinoinensis HOM05D007621 ORTHO05D009631 7.4e-78 295.8 192 70.3
Medtr2g011780 Medicago truncatula HOM05D007621 ORTHO05D009631 4.8e-77 293.1 274 55.5
FAN25G1179 Fragaria x ananassa HOM05D007621 ORTHO05D009631 2.3e-71 274.2 384 44.8
Oeu050825.1 Olea europaea HOM05D007621 ORTHO05D009631 2.4e-68 264.2 258 55.0
RcHm_v2.0_Chr7g0240451 Rosa chinensis HOM05D007621 ORTHO05D009631 2.4e-68 264.2 337 43.0
arahy.Tifrunner.gnm1.ann1.C857YU Arachis hypogaea HOM05D007621 ORTHO05D009631 1.2e-62 245.4 264 48.5
Psat1g210360 Pisum sativum HOM05D007621 ORTHO05D009631 2.8e-48 197.6 187 52.9
FvH4_6g02023 Fragaria vesca HOM05D007621 ORTHO05D009631 1.1e-31 142.5 133 48.9
Glyma.13G246302 Glycine max HOM05D007621 ORTHO05D009631 5.2e-31 140.2 143 53.8
Cre02.g116800 Chlamydomonas reinhardtii HOM05D007621 ORTHO05D009631 6.4e-29 133.3 486 26.7
Potri.004G034301 Populus trichocarpa HOM05D007621 ORTHO05D009631 3.9e-26 124.0 77 64.9
Cpa.g.sc27.127 Carica papaya HOM05D007621 ORTHO05D009631 6.0e-19 100.1 80 62.5
Atru.chr10.2012 Acer truncatum HOM05D007621 ORTHO05D009631 1.7e-18 98.6 132 44.7
SGA_v2.0_scaffold32G13107 Striga asiatica HOM05D007621 ORTHO05D009631 3.1e-15 87.8 126 44.4
Atru.chr10.2011 Acer truncatum HOM05D007621 ORTHO05D009631 2.6e-14 84.7 49 73.5
MCO11G679 Micromonas commoda HOM05D000032 ORTHO05D028824 7.6e-14 83.2 180 34.4
Cre03.g188750 Chlamydomonas reinhardtii HOM05D000032 ORTHO05D028824 1.1e-12 79.3 191 31.4
AagrBONN_evm.TU.Sc2ySwM_340.408 Anthoceros agrestis HOM05D007621 ORTHO05D009631 1.4e-12 79.0 83 48.2
Haze_26842 Corylus avellana HOM05D000032 ORTHO05D028824 8.1e-08 63.2 171 31.6
Sabra04G0020100 Salix brachista HOM05D007621 ORTHO05D009631 8.1e-08 63.2 165 27.9
SGA_v2.0_scaffold86G26914 Striga asiatica HOM05D007621 ORTHO05D009631 5.8e-06 57.0 57 50.9


User provided reference genes

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