Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0338241 Helianthus annuus HOM05D006472 ORTHO05D008222 0.0e+00 1408.3 722 100.0
ECA248G1121 Erigeron canadensis HOM05D006472 ORTHO05D008222 0.0e+00 1263.1 720 87.8
Lsat_1_v5_gn_5_176920 Lactuca sativa HOM05D006472 ORTHO05D008222 0.0e+00 1240.3 722 86.7
CSS0014639 Camellia sinensis var. sinensis HOM05D006472 ORTHO05D008222 0.0e+00 1095.1 721 75.5
Dinv28760 Davidia involucrata HOM05D006472 ORTHO05D008222 0.0e+00 1093.6 699 76.7
Actinidia34511 Actinidia chinensis HOM05D006472 ORTHO05D008222 0.0e+00 1092.0 720 75.1
vmacro14657 Vaccinium macrocarpon HOM05D006472 ORTHO05D008222 1.7e-310 1068.9 720 73.6
Hma1.2p1_0170F.1_g075410 Hydrangea macrophylla HOM05D006472 ORTHO05D008222 4.9e-310 1067.4 720 73.6
TAR369G0765 Trochodendron aralioides HOM05D006472 ORTHO05D008222 1.9e-309 1065.4 717 72.8
GSVIVG01024525001 Vitis vinifera HOM05D006472 ORTHO05D008222 2.7e-308 1061.6 721 73.0
Lj2C1106G3 Lonicera japonica HOM05D006472 ORTHO05D008222 5.0e-307 1057.4 721 72.8
Nn5g26767 Nelumbo nucifera HOM05D006472 ORTHO05D008222 2.1e-305 1052.0 720 71.8
Phvul.008G243600 Phaseolus vulgaris HOM05D006472 ORTHO05D008222 1.3e-302 1042.7 721 71.3
Glyma.02G238400 Glycine max HOM05D006472 ORTHO05D008222 6.4e-302 1040.4 721 71.3
Rhsim01G0245200 Rhododendron simsii HOM05D006472 ORTHO05D008222 4.1e-301 1037.7 789 67.2
QL01p023614 Quercus lobata HOM05D006472 ORTHO05D008222 5.4e-301 1037.3 721 71.3
Glyma.14G207300 Glycine max HOM05D006472 ORTHO05D008222 2.1e-300 1035.4 721 71.0
Cfa011860 Carpinus fangiana HOM05D006472 ORTHO05D008222 3.0e-299 1031.6 725 70.6
Lalb_Chr10g0103951 Lupinus albus HOM05D006472 ORTHO05D008222 5.6e-298 1027.3 722 70.8
VMungo0647G2416 Vigna mungo HOM05D006472 ORTHO05D008222 2.1e-297 1025.4 721 70.2
CiPaw.13G059900 Carya illinoinensis HOM05D006472 ORTHO05D008222 3.4e-295 1018.1 724 70.6
MD03G1047100 Malus domestica HOM05D006472 ORTHO05D008222 9.9e-295 1016.5 721 70.7
Prupe.6G038300 Prunus persica HOM05D006472 ORTHO05D008222 9.9e-295 1016.5 721 70.2
LjContig00141g0008115 Lotus japonicus HOM05D006472 ORTHO05D008222 2.9e-294 1015.0 716 69.8
CANSAT54G2825 Cannabis sativa HOM05D006472 ORTHO05D008222 4.1e-293 1011.1 718 69.2
Solyc09g055340.4 Solanum lycopersicum HOM05D006472 ORTHO05D008222 5.4e-293 1010.7 723 69.6
MELO3C013696.2 Cucumis melo HOM05D006472 ORTHO05D008222 3.5e-292 1008.1 720 70.3
Atru.chr10.2355 Acer truncatum HOM05D006472 ORTHO05D008222 6.6e-291 1003.8 717 70.4
Sopen09g017740 Solanum pennellii HOM05D006472 ORTHO05D008222 4.7e-289 997.7 712 69.1
EL10Ac8g20566 Beta vulgaris HOM05D006472 ORTHO05D008222 1.5e-287 992.6 721 68.0
Manes.18G123800 Manihot esculenta HOM05D006472 ORTHO05D008222 2.0e-287 992.3 721 69.1
Potri.019G133000 Populus trichocarpa HOM05D006472 ORTHO05D008222 2.9e-286 988.4 713 69.8
Medtr5g075970 Medicago truncatula HOM05D006472 ORTHO05D008222 8.4e-286 986.9 722 67.2
FvH4_3g41130 Fragaria vesca HOM05D006472 ORTHO05D008222 1.1e-285 986.5 722 68.1
RcHm_v2.0_Chr5g0073921 Rosa chinensis HOM05D006472 ORTHO05D008222 1.4e-285 986.1 722 67.7
FAN16G1417 Fragaria x ananassa HOM05D006472 ORTHO05D008222 3.2e-285 984.9 722 68.1
FAN11G3159 Fragaria x ananassa HOM05D006472 ORTHO05D008222 4.2e-285 984.6 722 68.0
Ca_05732_v3 Cicer arietinum L. HOM05D006472 ORTHO05D008222 5.4e-285 984.2 724 67.0
Migut.N00711 Erythranthe guttata HOM05D006472 ORTHO05D008222 1.6e-284 982.6 722 69.3
Thecc.09G366100 Theobroma cacao HOM05D006472 ORTHO05D008222 1.6e-284 982.6 727 68.9
Sabra19G0129200 Salix brachista HOM05D006472 ORTHO05D008222 4.6e-284 981.1 723 68.7
PSO339G5368 Papaver somniferum HOM05D006472 ORTHO05D008222 6.0e-284 980.7 722 67.3
FAN21G1719 Fragaria x ananassa HOM05D006472 ORTHO05D008222 7.8e-284 980.3 722 67.6
PSO384G2469 Papaver somniferum HOM05D006472 ORTHO05D008222 2.5e-282 975.3 722 67.2
SGA_v2.0_scaffold120G33005 Striga asiatica HOM05D006472 ORTHO05D008222 5.6e-282 974.2 731 67.6
CDE07G0456 Ceratophyllum demersum HOM05D006472 ORTHO05D008222 1.6e-281 972.6 720 66.7
TPR.G15403 Trifolium pratense HOM05D006472 ORTHO05D008222 2.8e-281 971.8 712 67.1
Haze_24495 Corylus avellana HOM05D006472 ORTHO05D008222 6.2e-281 970.7 833 61.0
AUR62039472 Chenopodium quinoa HOM05D006472 ORTHO05D008222 1.4e-280 969.5 721 67.4
FAN25G3237 Fragaria x ananassa HOM05D006472 ORTHO05D008222 5.6e-274 947.6 722 66.6
Aqoxy2G00669 Aquilegia oxysepala HOM05D006472 ORTHO05D008222 9.6e-274 946.8 716 63.8
Psat2g049480 Pisum sativum HOM05D006472 ORTHO05D008222 9.6e-274 946.8 722 65.4
TWI31G0750 Tripterygium wilfordii HOM05D006472 ORTHO05D008222 3.1e-272 941.8 724 67.1
Ah.09g233500 Amaranthus hybridus HOM05D006472 ORTHO05D008222 1.5e-271 939.5 721 66.2
arahy.Tifrunner.gnm1.ann1.LP7W2Z Arachis hypogaea HOM05D006472 ORTHO05D008222 9.9e-271 936.8 717 66.2
Gohir.D03G146000 Gossypium hirsutum HOM05D006472 ORTHO05D008222 3.8e-270 934.9 724 67.0
Gohir.A03G022700 Gossypium hirsutum HOM05D006472 ORTHO05D008222 2.4e-269 932.2 721 67.0
PGR119G0508 Punica granatum HOM05D006472 ORTHO05D008222 7.9e-268 927.2 727 65.5
Duzib168G0790 Durio zibethinus HOM05D006472 ORTHO05D008222 8.7e-267 923.7 726 65.6
Eucgr.J01848 Eucalyptus grandis HOM05D006472 ORTHO05D008222 8.7e-267 923.7 729 64.6
Sed0004215 Sechium edule HOM05D006472 ORTHO05D008222 1.5e-266 922.9 621 72.9
COL.COLO4_08158 Corchorus olitorius HOM05D006472 ORTHO05D008222 1.8e-264 916.0 729 65.0
arahy.Tifrunner.gnm1.ann1.9899SL Arachis hypogaea HOM05D006472 ORTHO05D008222 1.1e-261 906.7 717 65.0
THA.LOC104798389 Tarenaya hassleriana HOM05D006472 ORTHO05D008222 2.1e-260 902.5 722 62.9
Sc11g0008920 Simmondsia chinensis HOM05D006472 ORTHO05D008222 6.3e-257 891.0 653 67.8
Sp6g13540 Schrenkiella parvula HOM05D006472 ORTHO05D008222 2.5e-250 869.0 719 60.6
Aa31LG3G7830 Aethionema arabicum HOM05D006472 ORTHO05D008222 4.3e-250 868.2 719 60.5
AL8G25600 Arabidopsis lyrata HOM05D006472 ORTHO05D008222 1.3e-249 866.7 719 60.6
BraA10t42993Z Brassica rapa HOM05D006472 ORTHO05D008222 2.8e-249 865.5 720 61.0
BcaC04g20686 Brassica carinata HOM05D006472 ORTHO05D008222 4.8e-249 864.8 718 61.0
C09p40600 Brassica napus HOM05D006472 ORTHO05D008222 4.8e-249 864.8 718 61.0
BolC9t56942H Brassica oleracea HOM05D006472 ORTHO05D008222 4.8e-249 864.8 718 61.0
A10p09080 Brassica napus HOM05D006472 ORTHO05D008222 6.3e-249 864.4 720 60.8
BcaB08g35491 Brassica carinata HOM05D006472 ORTHO05D008222 8.2e-249 864.0 718 60.6
AT5G51340 Arabidopsis thaliana HOM05D006472 ORTHO05D008222 1.4e-248 863.2 720 60.4
Carub.0008s1136 Capsella rubella HOM05D006472 ORTHO05D008222 4.2e-245 851.7 719 59.2
Thhalv10012792m.g Eutrema salsugineum HOM05D006472 ORTHO05D008222 5.5e-245 851.3 721 59.8
ATR1127G223 Amborella trichopoda HOM05D006472 ORTHO05D008222 3.0e-235 818.9 712 59.7
HPP92_024257 Vanilla planifolia HOM05D006472 ORTHO05D008222 3.2e-229 798.9 724 57.5
HPP92_024263 Vanilla planifolia HOM05D006472 ORTHO05D008222 3.2e-229 798.9 724 57.5
DCAR_012719 Daucus carota HOM05D006472 ORTHO05D008222 2.9e-222 775.8 586 66.6
Medtr6g049450 Medicago truncatula HOM05D006472 ORTHO05D008222 9.5e-213 744.2 666 58.1
unitig_8.g3682 Utricularia gibba HOM05D004101 ORTHO05D005221 6.1e-204 714.9 672 57.7
Zm00001eb193950 Zea mays HOM05D006472 ORTHO05D008222 5.4e-200 701.8 733 52.7
Ciclev10000965m.g Citrus clementina HOM05D006472 ORTHO05D008222 5.0e-198 695.3 479 69.9
Mapoly0020s0144 Marchantia polymorpha HOM05D006472 ORTHO05D008222 1.7e-185 653.7 666 51.1
Oeu034746.1 Olea europaea HOM05D006472 ORTHO05D008222 4.9e-185 652.1 468 71.2
SMO119G0519 Selaginella moellendorffii HOM05D006472 ORTHO05D008222 7.1e-184 648.3 680 50.3
Nitab4.5_0002030g0020 Nicotiana tabacum HOM05D006472 ORTHO05D008222 1.2e-180 637.5 600 55.3
Pp3c26_4960 Physcomitrium patens HOM05D006472 ORTHO05D008222 1.4e-179 634.0 673 50.1
Pp3c10_12710 Physcomitrium patens HOM05D006472 ORTHO05D008222 9.9e-178 627.9 665 49.0
CsaV3_3G000010 Cucumis sativus L. HOM05D006472 ORTHO05D008222 2.1e-164 583.6 434 68.9
AUR62041830 Chenopodium quinoa HOM05D006472 ORTHO05D008222 7.6e-154 548.5 506 56.5
Peaxi162Scf00293g00816 Petunia axillaris HOM05D006472 ORTHO05D008222 7.6e-154 548.5 428 64.5
THA.LOC104824615 Tarenaya hassleriana HOM05D006472 ORTHO05D008222 2.2e-153 547.0 430 61.9
AagrBONN_evm.TU.Sc2ySwM_117.3516 Anthoceros agrestis HOM05D006472 ORTHO05D008222 1.4e-144 517.7 667 43.2
ClCG10G000020 Citrullus lanatus HOM05D006472 ORTHO05D008222 3.6e-135 486.5 375 64.3
THA.LOC104824654 Tarenaya hassleriana HOM05D006472 ORTHO05D008222 6.1e-135 485.7 392 60.7
Nitab4.5_0000195g0150 Nicotiana tabacum HOM05D006472 ORTHO05D008222 6.3e-132 475.7 479 53.9
CBR_g46787 Chara braunii HOM05D006472 ORTHO05D008222 1.4e-128 464.5 662 39.0
Cc01_g15530 Coffea canephora HOM05D006472 ORTHO05D008222 6.3e-124 449.1 300 70.3
Cpa.g.sc2.260 Carica papaya HOM05D006472 ORTHO05D008222 1.4e-118 431.4 377 59.2
Os04g0347600 Oryza sativa ssp. japonica HOM05D006472 ORTHO05D008222 5.3e-115 419.5 335 63.9
ClCG10G000010 Citrullus lanatus HOM05D006472 ORTHO05D008222 2.6e-101 374.0 323 61.6
Cpa.g.sc2.261 Carica papaya HOM05D006472 ORTHO05D008222 1.3e-97 361.7 312 62.2
Cc01_g15520 Coffea canephora HOM05D006472 ORTHO05D008222 6.6e-97 359.4 263 70.3
CARHR264090 Cardamine hirsuta HOM05D006472 ORTHO05D008222 2.4e-91 340.9 294 60.5
SHI30108 Sapria himalayana HOM05D006714 ORTHO05D008103 3.2e-91 340.5 584 38.0
Nn5g26768 Nelumbo nucifera HOM05D006472 ORTHO05D008222 1.5e-88 331.6 231 71.0
Atru.chr10.2358 Acer truncatum HOM05D006472 ORTHO05D008222 3.0e-81 307.4 237 62.0
Nitab4.5_0001025g0010 Nicotiana tabacum HOM05D006472 ORTHO05D008222 3.4e-77 293.9 213 64.8
Gorai.003G153200 Gossypium raimondii HOM05D006472 ORTHO05D008222 3.9e-49 200.7 158 68.4
Ciclev10004061m.g Citrus clementina HOM05D006472 ORTHO05D008222 4.8e-47 193.7 153 67.3
SEGI_25118 Sequoiadendron giganteum HOM05D006472 ORTHO05D008222 3.1e-46 191.0 137 66.4
Haze_06065 Corylus avellana HOM05D000100 ORTHO05D000052 1.4e-43 182.2 148 56.1
MCO15G146 Micromonas commoda HOM05D006472 ORTHO05D008222 3.0e-33 147.9 725 24.3
Lsat_1_v5_gn_5_131141 Lactuca sativa HOM05D006472 ORTHO05D008222 1.8e-22 112.1 69 79.7
Peaxi162Scf00293g00815 Petunia axillaris HOM05D006472 ORTHO05D008222 6.9e-22 110.2 106 55.7
SEGI_41332 Sequoiadendron giganteum HOM05D006472 ORTHO05D008222 9.4e-19 99.8 71 67.6
Cre12.g532650 Chlamydomonas reinhardtii HOM05D006472 ORTHO05D008222 1.5e-16 92.4 686 23.3
Actinidia23826 Actinidia chinensis HOM05D006472 ORTHO05D008222 1.0e-12 79.7 63 65.1
Medtr5g078560 Medicago truncatula HOM05D006472 ORTHO05D008222 3.3e-08 64.7 44 70.5
Medtr6g051400 Medicago truncatula HOM05D006472 ORTHO05D008222 7.4e-08 63.5 52 51.9


User provided reference genes

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