Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0337821 Helianthus annuus HOM05D000047 ORTHO05D000044 3.9e-50 201.1 94 100.0
HanXRQChr05g0143021 Helianthus annuus HOM05D000047 ORTHO05D000044 5.6e-25 117.5 67 80.6
HanXRQChr08g0231341 Helianthus annuus HOM05D000047 ORTHO05D000044 5.6e-25 117.5 72 69.4
HanXRQChr00c0038g0571261 Helianthus annuus HOM05D000047 ORTHO05D000044 1.6e-24 115.9 72 69.4
HanXRQChr03g0089951 Helianthus annuus HOM05D000047 ORTHO05D000044 8.2e-24 113.6 62 85.5
ECA232G4041 Erigeron canadensis HOM05D000047 ORTHO05D000044 1.3e-21 106.3 74 62.2
ECA240G4615 Erigeron canadensis HOM05D000014 ORTHO05D000016 2.2e-21 105.5 74 62.2
ECA232G4305 Erigeron canadensis HOM05D000047 ORTHO05D000352 4.9e-21 104.4 74 60.8
ECA238G3383 Erigeron canadensis HOM05D000047 ORTHO05D000044 1.9e-20 102.4 72 59.7
ECA248G2127 Erigeron canadensis HOM05D000047 ORTHO05D000044 3.2e-20 101.7 72 61.1
ECA233G4449 Erigeron canadensis HOM05D000047 ORTHO05D000044 9.3e-20 100.1 74 59.5
AUR62040546 Chenopodium quinoa HOM05D000047 ORTHO05D000044 2.7e-19 98.6 74 59.5
AUR62040378 Chenopodium quinoa HOM05D000047 ORTHO05D000044 1.3e-18 96.3 74 58.1
ECA238G2746 Erigeron canadensis HOM05D000047 ORTHO05D000044 1.8e-18 95.9 74 56.8
AUR62034873 Chenopodium quinoa HOM05D000047 ORTHO05D000044 2.3e-18 95.5 102 46.1
ECA240G0268 Erigeron canadensis HOM05D000047 ORTHO05D000044 8.7e-18 93.6 74 55.4
AUR62040602 Chenopodium quinoa HOM05D000047 ORTHO05D000044 1.1e-17 93.2 74 55.4
ECA238G0391 Erigeron canadensis HOM05D000047 ORTHO05D000044 1.1e-17 93.2 74 58.1
AUR62010696 Chenopodium quinoa HOM05D000047 ORTHO05D000044 2.5e-17 92.0 71 57.7
AUR62041318 Chenopodium quinoa HOM05D000047 ORTHO05D000044 3.3e-17 91.7 72 56.9
ECA236G3431 Erigeron canadensis HOM05D000047 ORTHO05D000044 5.7e-17 90.9 74 60.8
AUR62031155 Chenopodium quinoa HOM05D000047 ORTHO05D000044 7.4e-17 90.5 71 59.2
ECA240G3977 Erigeron canadensis HOM05D000047 ORTHO05D000044 1.6e-16 89.4 74 54.1
ECA248G3087 Erigeron canadensis HOM05D000047 ORTHO05D000044 1.6e-16 89.4 74 56.8
ECA236G3298 Erigeron canadensis HOM05D000047 ORTHO05D000044 2.2e-16 89.0 67 56.7
ECA232G1697 Erigeron canadensis HOM05D000047 ORTHO05D000044 2.8e-16 88.6 74 56.8
ECA247G1553 Erigeron canadensis HOM05D000047 ORTHO05D000044 4.1e-15 84.7 69 53.6
AUR62039617 Chenopodium quinoa HOM05D000047 ORTHO05D000044 9.0e-15 83.6 67 55.2
ECA236G1410 Erigeron canadensis HOM05D000047 ORTHO05D000044 9.0e-15 83.6 74 54.1
TAR683G0004 Trochodendron aralioides HOM05D000047 ORTHO05D000044 1.2e-14 83.2 75 46.7
AUR62042454 Chenopodium quinoa HOM05D000047 ORTHO05D000044 1.5e-14 82.8 71 50.7
ECA248G0210 Erigeron canadensis HOM05D000047 ORTHO05D000044 2.0e-14 82.4 56 62.5
CSS0020182 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 2.6e-14 82.0 74 50.0
AUR62029864 Chenopodium quinoa HOM05D000047 ORTHO05D000044 2.6e-14 82.0 71 53.5
AUR62038914 Chenopodium quinoa HOM05D000047 ORTHO05D000044 3.4e-14 81.6 71 53.5
TWI81G0819 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 5.9e-14 80.9 73 42.5
CSS0009338 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 7.7e-14 80.5 74 48.6
TWI81G0360 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 7.7e-14 80.5 71 49.3
CSS0028604 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 1.0e-13 80.1 74 47.3
CSS0029853 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 1.0e-13 80.1 74 47.3
CSS0043404 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 1.0e-13 80.1 74 47.3
CSS0046711 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 1.0e-13 80.1 74 47.3
AUR62005957 Chenopodium quinoa HOM05D000047 ORTHO05D000044 1.3e-13 79.7 74 50.0
AUR62023736 Chenopodium quinoa HOM05D000047 ORTHO05D000044 1.3e-13 79.7 71 49.3
TWI34G0513 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 1.3e-13 79.7 68 52.9
TWI38G1760 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 1.3e-13 79.7 71 49.3
TWI73G0129 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 1.3e-13 79.7 71 49.3
CSS0023198 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 1.7e-13 79.3 74 47.3
AUR62043069 Chenopodium quinoa HOM05D000047 ORTHO05D000044 2.2e-13 79.0 71 49.3
CANSAT54G1927 Cannabis sativa HOM05D000047 ORTHO05D000044 2.9e-13 78.6 69 49.3
AUR62013961 Chenopodium quinoa HOM05D000047 ORTHO05D000044 2.9e-13 78.6 71 49.3
AUR62039000 Chenopodium quinoa HOM05D000047 ORTHO05D000044 2.9e-13 78.6 71 49.3
AUR62042247 Chenopodium quinoa HOM05D000047 ORTHO05D000044 2.9e-13 78.6 71 49.3
CSS0008580 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 3.8e-13 78.2 74 47.3
AUR62041262 Chenopodium quinoa HOM05D000047 ORTHO05D000044 3.8e-13 78.2 71 49.3
CSS0008626 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 6.5e-13 77.4 74 45.9
QL93p0205_0258 Quercus lobata HOM05D000047 ORTHO05D000044 6.5e-13 77.4 70 47.1
CSS0020375 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 8.5e-13 77.0 74 47.3
CSS0015869 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 1.1e-12 76.6 74 43.2
AUR62033967 Chenopodium quinoa HOM05D000047 ORTHO05D000044 1.1e-12 76.6 71 49.3
QL11p049215 Quercus lobata HOM05D000047 ORTHO05D000044 1.1e-12 76.6 70 47.1
QL05p012956 Quercus lobata HOM05D000047 ORTHO05D000044 1.4e-12 76.3 70 47.1
QL08p065228 Quercus lobata HOM05D000047 ORTHO05D000044 1.4e-12 76.3 70 47.1
AUR62018098 Chenopodium quinoa HOM05D000047 ORTHO05D000044 1.9e-12 75.9 71 49.3
TWI60G1643 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 1.9e-12 75.9 71 46.5
CSS0001151 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 4.2e-12 74.7 74 45.9
AUR62021805 Chenopodium quinoa HOM05D000047 ORTHO05D000044 4.2e-12 74.7 71 47.9
CSS0044317 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 5.5e-12 74.3 72 47.2
AUR62023936 Chenopodium quinoa HOM05D000047 ORTHO05D000044 9.4e-12 73.6 53 64.2
TWI75G0872 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 9.4e-12 73.6 72 41.7
BcaB01g00711 Brassica carinata HOM05D000047 ORTHO05D000044 1.2e-11 73.2 72 40.3
CSS0013035 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 2.1e-11 72.4 74 44.6
TWI31G0250 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 2.7e-11 72.0 71 45.1
Oeu015693.1 Olea europaea HOM05D000047 ORTHO05D000044 6.1e-11 70.9 72 48.6
FvH4_4g05722 Fragaria vesca HOM05D000047 ORTHO05D000044 7.9e-11 70.5 73 45.2
Oeu037404.1 Olea europaea HOM05D000047 ORTHO05D000044 1.0e-10 70.1 74 44.6
Atru.chr2.1730 Acer truncatum HOM05D000047 ORTHO05D000044 1.4e-10 69.7 66 50.0
AUR62039185 Chenopodium quinoa HOM05D000047 ORTHO05D000044 1.4e-10 69.7 51 64.7
BolC3t18154H Brassica oleracea HOM05D000047 ORTHO05D000044 3.0e-10 68.6 72 41.7
ECA240G3302 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.0e-10 68.6 55 58.2
ECA246G0834 Erigeron canadensis HOM05D000006 ORTHO05D000044 5.1e-10 67.8 56 58.9
QL10p047797 Quercus lobata HOM05D000047 ORTHO05D000044 5.1e-10 67.8 72 43.1
CANSAT21G0395 Cannabis sativa HOM05D000047 ORTHO05D000044 6.7e-10 67.4 74 41.9
CANSAT25G2822 Cannabis sativa HOM05D000047 ORTHO05D000044 6.7e-10 67.4 75 42.7
CANSAT54G2590 Cannabis sativa HOM05D000047 ORTHO05D000044 6.7e-10 67.4 62 46.8
ECA238G1593 Erigeron canadensis HOM05D000006 ORTHO05D000044 6.7e-10 67.4 55 58.2
Oeu020701.1 Olea europaea HOM05D000047 ORTHO05D000044 6.7e-10 67.4 72 38.9
Oeu061657.1 Olea europaea HOM05D000047 ORTHO05D000044 6.7e-10 67.4 74 47.3
arahy.Tifrunner.gnm1.ann1.KE2IUD Arachis hypogaea HOM05D000047 ORTHO05D000044 8.8e-10 67.0 72 43.1
ECA233G4443 Erigeron canadensis HOM05D000006 ORTHO05D000091 1.1e-09 66.6 58 53.4
PSO063G3841 Papaver somniferum HOM05D000047 ORTHO05D000044 1.1e-09 66.6 70 45.7
CSS0035830 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 3.3e-09 65.1 61 47.5
CSS0039284 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 3.3e-09 65.1 61 49.2
ECA236G3805 Erigeron canadensis HOM05D000006 ORTHO05D000352 4.3e-09 64.7 51 62.7
Oeu014420.1 Olea europaea HOM05D000047 ORTHO05D000044 5.7e-09 64.3 69 42.0
C05p12170 Brassica napus HOM05D000046 ORTHO05D041072 7.4e-09 63.9 60 43.3
AUR62035205 Chenopodium quinoa HOM05D000047 ORTHO05D000044 7.4e-09 63.9 56 51.8
ECA232G1319 Erigeron canadensis HOM05D000004 ORTHO05D000002 7.4e-09 63.9 46 60.9
ECA233G4752 Erigeron canadensis HOM05D000047 ORTHO05D000044 7.4e-09 63.9 72 40.3
CSS0043586 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 9.7e-09 63.5 61 50.8
ECA233G0568 Erigeron canadensis HOM05D000047 ORTHO05D000044 9.7e-09 63.5 56 55.4
CSS0029707 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 1.3e-08 63.2 61 50.8
ECA232G3584 Erigeron canadensis HOM05D000047 ORTHO05D000044 1.3e-08 63.2 56 53.6
CANSAT56G3992 Cannabis sativa HOM05D000047 ORTHO05D000044 1.7e-08 62.8 76 40.8
AUR62028323 Chenopodium quinoa HOM05D000047 ORTHO05D000044 1.7e-08 62.8 56 53.6
AUR62040544 Chenopodium quinoa HOM05D000047 ORTHO05D000044 1.7e-08 62.8 38 68.4
SGA_v2.0_scaffold402G50992 Striga asiatica HOM05D000047 ORTHO05D000044 1.7e-08 62.8 74 44.6
ECA240G2003 Erigeron canadensis HOM05D000047 ORTHO05D000044 3.7e-08 61.6 51 58.8
BolC5t29970H Brassica oleracea HOM05D000046 ORTHO05D041072 4.8e-08 61.2 60 43.3
AUR62034465 Chenopodium quinoa HOM05D000047 ORTHO05D000044 6.3e-08 60.8 51 54.9
ECA232G2732 Erigeron canadensis HOM05D000047 ORTHO05D000044 6.3e-08 60.8 51 56.9
AUR62041176 Chenopodium quinoa HOM05D000047 ORTHO05D000044 8.2e-08 60.5 62 45.2
AUR62044002 Chenopodium quinoa HOM05D000047 ORTHO05D000044 8.2e-08 60.5 51 54.9
ECA248G3886 Erigeron canadensis HOM05D000047 ORTHO05D000044 8.2e-08 60.5 71 40.8
PSO339G6076 Papaver somniferum HOM05D000047 ORTHO05D000044 1.1e-07 60.1 75 34.7
AUR62039811 Chenopodium quinoa HOM05D000047 ORTHO05D000044 1.4e-07 59.7 56 51.8
ECA238G4523 Erigeron canadensis HOM05D000047 ORTHO05D000044 1.4e-07 59.7 74 39.2
Oeu005900.1 Olea europaea HOM05D000047 ORTHO05D000044 1.4e-07 59.7 69 42.0
ECA246G4964 Erigeron canadensis HOM05D000047 ORTHO05D000044 1.8e-07 59.3 73 38.4
ECA232G4113 Erigeron canadensis HOM05D000047 ORTHO05D000044 2.4e-07 58.9 73 38.4
ECA233G0857 Erigeron canadensis HOM05D000047 ORTHO05D000044 2.4e-07 58.9 72 37.5
ECA233G3519 Erigeron canadensis HOM05D000047 ORTHO05D000044 2.4e-07 58.9 72 37.5
ECA240G1209 Erigeron canadensis HOM05D000047 ORTHO05D000044 2.4e-07 58.9 75 40.0
ECA240G2812 Erigeron canadensis HOM05D000047 ORTHO05D000044 2.4e-07 58.9 72 38.9
ECA246G3590 Erigeron canadensis HOM05D000047 ORTHO05D000044 2.4e-07 58.9 77 39.0
ECA232G1135 Erigeron canadensis HOM05D000047 ORTHO05D000044 3.1e-07 58.5 74 35.1
ECA233G3367 Erigeron canadensis HOM05D000047 ORTHO05D000044 3.1e-07 58.5 70 38.6
ECA236G2809 Erigeron canadensis HOM05D000047 ORTHO05D000044 3.1e-07 58.5 72 36.1
ECA246G2740 Erigeron canadensis HOM05D000047 ORTHO05D000044 3.1e-07 58.5 74 40.5
PSO339G3235 Papaver somniferum HOM05D000047 ORTHO05D000044 4.1e-07 58.2 73 37.0
PSO782G0315 Papaver somniferum HOM05D000047 ORTHO05D000044 4.1e-07 58.2 72 40.3
ECA232G3856 Erigeron canadensis HOM05D000047 ORTHO05D000044 5.3e-07 57.8 73 38.4
PSO781G0291 Papaver somniferum HOM05D000047 ORTHO05D000044 5.3e-07 57.8 75 33.3
ECA238G2592 Erigeron canadensis HOM05D000047 ORTHO05D000044 6.9e-07 57.4 72 36.1
ECA247G4068 Erigeron canadensis HOM05D000047 ORTHO05D000044 6.9e-07 57.4 72 37.5
RcHm_v2.0_Chr5g0038141 Rosa chinensis HOM05D000047 ORTHO05D000044 6.9e-07 57.4 80 35.0
PSO724G1287 Papaver somniferum HOM05D000047 ORTHO05D000044 9.1e-07 57.0 73 32.9
SEGI_00622 Sequoiadendron giganteum HOM05D000047 ORTHO05D000044 9.1e-07 57.0 71 42.3
TWI38G1675 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 9.1e-07 57.0 62 45.2
TWI23G0626 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 1.5e-06 56.2 43 51.2
ECA246G0957 Erigeron canadensis HOM05D000047 ORTHO05D000044 2.0e-06 55.8 75 40.0
ECA233G3535 Erigeron canadensis HOM05D000047 ORTHO05D000044 2.6e-06 55.5 75 38.7
ECA238G2233 Erigeron canadensis HOM05D000047 ORTHO05D000044 2.6e-06 55.5 72 36.1
ECA246G4475 Erigeron canadensis HOM05D000047 ORTHO05D000044 2.6e-06 55.5 72 40.3
PSO339G2655 Papaver somniferum HOM05D000047 ORTHO05D000044 2.6e-06 55.5 72 36.1
ECA233G5548 Erigeron canadensis HOM05D000006 ORTHO05D000001 3.4e-06 55.1 75 34.7
ECA238G0172 Erigeron canadensis HOM05D000047 ORTHO05D000044 3.4e-06 55.1 72 36.1
AUR62009200 Chenopodium quinoa HOM05D000047 ORTHO05D000044 4.5e-06 54.7 40 57.5
ECA238G1277 Erigeron canadensis HOM05D000047 ORTHO05D000044 4.5e-06 54.7 72 36.1
ECA234G0304 Erigeron canadensis HOM05D000047 ORTHO05D000044 7.7e-06 53.9 75 38.7
ECA234G4635 Erigeron canadensis HOM05D000047 ORTHO05D000044 7.7e-06 53.9 72 36.1


User provided reference genes

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