Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0337791 Helianthus annuus HOM05D009374 ORTHO05D012864 2.1e-159 565.8 334 100.0
HanXRQChr11g0332911 Helianthus annuus HOM05D009374 ORTHO05D012864 1.2e-109 400.6 294 77.6
HanXRQChr11g0332931 Helianthus annuus HOM05D009374 ORTHO05D012864 2.5e-83 313.2 376 54.5
Lsat_1_v5_gn_7_106501 Lactuca sativa HOM05D009374 ORTHO05D012864 2.6e-48 196.8 288 46.2
HanXRQChr15g0493431 Helianthus annuus HOM05D009374 ORTHO05D012864 1.8e-41 174.1 296 44.9
Lsat_1_v5_gn_7_93341 Lactuca sativa HOM05D009374 ORTHO05D012864 1.2e-40 171.4 285 43.5
Lsat_1_v5_gn_7_93361 Lactuca sativa HOM05D009374 ORTHO05D012864 1.2e-40 171.4 285 43.5
Lsat_1_v5_gn_7_93381 Lactuca sativa HOM05D009374 ORTHO05D012864 1.2e-40 171.4 285 43.5
Lsat_1_v5_gn_7_93441 Lactuca sativa HOM05D009374 ORTHO05D012864 1.2e-40 171.4 285 43.5
Lsat_1_v5_gn_7_93500 Lactuca sativa HOM05D009374 ORTHO05D012864 1.2e-40 171.4 285 43.5
Lsat_1_v5_gn_7_93520 Lactuca sativa HOM05D009374 ORTHO05D012864 1.2e-40 171.4 285 43.5
ECA248G3520 Erigeron canadensis HOM05D009374 ORTHO05D012864 2.2e-31 140.6 297 39.1
ECA236G3141 Erigeron canadensis HOM05D009374 ORTHO05D012864 2.4e-30 137.1 326 37.4
ECA236G3076 Erigeron canadensis HOM05D009374 ORTHO05D012864 4.2e-30 136.3 317 37.5
ECA236G4404 Erigeron canadensis HOM05D009374 ORTHO05D012864 6.2e-26 122.5 149 53.0
Lsat_1_v5_gn_7_108000 Lactuca sativa HOM05D009374 ORTHO05D012864 1.3e-20 104.8 181 37.6
ECA236G0204 Erigeron canadensis HOM05D009374 ORTHO05D012864 1.8e-17 94.4 160 44.4
COL.COLO4_09579 Corchorus olitorius HOM05D006536 ORTHO05D005877 1.3e-15 88.2 290 28.6
Dinv26537 Davidia involucrata HOM05D006536 ORTHO05D005877 1.2e-13 81.6 153 41.2
Eucgr.F03431 Eucalyptus grandis HOM05D006536 ORTHO05D005877 1.0e-12 78.6 149 39.6
Lsat_1_v5_gn_8_65721 Lactuca sativa HOM05D009374 ORTHO05D012864 1.3e-12 78.2 147 42.9
Atru.chr2.3226 Acer truncatum HOM05D001264 ORTHO05D001167 3.9e-12 76.6 209 29.7
ECA236G4149 Erigeron canadensis HOM05D009374 ORTHO05D012864 5.7e-11 72.8 179 36.9
HanXRQChr13g0408641 Helianthus annuus HOM05D009374 ORTHO05D005877 7.4e-11 72.4 152 35.5
Hma1.2p1_0745F.1_g212040 Hydrangea macrophylla HOM05D006536 ORTHO05D005877 7.4e-11 72.4 144 35.4
Peaxi162Scf00450g00873 Petunia axillaris HOM05D006536 ORTHO05D005877 9.7e-11 72.0 155 36.8
unitig_744.g24698 Utricularia gibba HOM05D009374 ORTHO05D005877 1.6e-10 71.2 183 31.1
Dinv40717 Davidia involucrata HOM05D006536 ORTHO05D005877 4.8e-10 69.7 113 43.4
SGA_v2.0_scaffold13G06717 Striga asiatica HOM05D006536 ORTHO05D005877 4.8e-10 69.7 133 35.3
Nitab4.5_0000397g0170 Nicotiana tabacum HOM05D006536 ORTHO05D005877 1.8e-09 67.8 153 33.3
Migut.J01035 Erythranthe guttata HOM05D006536 ORTHO05D005877 2.4e-09 67.4 149 35.6
Peaxi162Scf00450g00854 Petunia axillaris HOM05D006536 ORTHO05D005877 4.1e-09 66.6 152 34.2
Solyc07g064210.2 Solanum lycopersicum HOM05D006536 ORTHO05D005877 4.1e-09 66.6 154 33.8
PSO675G9181 Papaver somniferum HOM05D006536 ORTHO05D005877 6.9e-09 65.9 153 33.3
SGA_v2.0_scaffold13G06718 Striga asiatica HOM05D006536 ORTHO05D005877 6.9e-09 65.9 135 33.3
PSO541G4685 Papaver somniferum HOM05D006536 ORTHO05D005877 9.1e-09 65.5 146 32.2
Peaxi162Scf00450g00816 Petunia axillaris HOM05D006536 ORTHO05D005877 1.2e-08 65.1 155 35.5
Nitab4.5_0001479g0050 Nicotiana tabacum HOM05D006536 ORTHO05D005877 1.5e-08 64.7 153 37.9
Nitab4.5_0006023g0020 Nicotiana tabacum HOM05D006536 ORTHO05D005877 1.5e-08 64.7 152 32.9
ClCG10G005680 Citrullus lanatus HOM05D006536 ORTHO05D005877 2.6e-08 63.9 147 29.9
Nitab4.5_0000472g0270 Nicotiana tabacum HOM05D006536 ORTHO05D005877 2.6e-08 63.9 156 31.4
Migut.J01038 Erythranthe guttata HOM05D006536 ORTHO05D005877 3.4e-08 63.5 155 34.2
PSO541G3913 Papaver somniferum HOM05D006536 ORTHO05D005877 3.4e-08 63.5 151 31.1
Sed0024994 Sechium edule HOM05D006536 ORTHO05D005877 3.4e-08 63.5 149 32.2
Nn1g07020 Nelumbo nucifera HOM05D023228 ORTHO05D005877 1.0e-07 62.0 162 32.1
PSO478G5239 Papaver somniferum HOM05D006536 ORTHO05D005877 1.0e-07 62.0 151 31.8
Lsat_1_v5_gn_5_5901 Lactuca sativa HOM05D009374 ORTHO05D005877 1.3e-07 61.6 81 43.2
PGSC0003DMG400001033 Solanum tuberosum HOM05D006536 ORTHO05D005877 1.3e-07 61.6 153 30.1
unitig_8.g4307 Utricularia gibba HOM05D006536 ORTHO05D005877 1.3e-07 61.6 160 34.4
PSO541G5532 Papaver somniferum HOM05D006536 ORTHO05D005877 1.7e-07 61.2 150 28.7
Migut.J01041 Erythranthe guttata HOM05D006536 ORTHO05D005877 3.8e-07 60.1 160 34.4
MBI18_g21250_MAGBIO Magnolia biondii HOM05D006536 ORTHO05D005877 3.8e-07 60.1 105 37.1
vmacro11763 Vaccinium macrocarpon HOM05D006536 ORTHO05D005877 3.8e-07 60.1 110 40.0
CiPaw.12G126700 Carya illinoinensis HOM05D006536 ORTHO05D005877 5.0e-07 59.7 148 33.1
Nitab4.5_0001479g0060 Nicotiana tabacum HOM05D006536 ORTHO05D005877 5.0e-07 59.7 123 39.0
Nn1g07021 Nelumbo nucifera HOM05D023228 ORTHO05D005877 6.5e-07 59.3 156 30.8
Peaxi162Scf00057g00136 Petunia axillaris HOM05D006536 ORTHO05D005877 1.4e-06 58.2 153 30.7
ECA236G3603 Erigeron canadensis HOM05D009374 ORTHO05D012864 2.5e-06 57.4 144 31.2
Cfa020408 Carpinus fangiana HOM05D006536 ORTHO05D005877 3.2e-06 57.0 153 35.9
Nitab4.5_0004487g0010 Nicotiana tabacum HOM05D006536 ORTHO05D005877 3.2e-06 57.0 114 33.3
Nitab4.5_0008018g0020 Nicotiana tabacum HOM05D006536 ORTHO05D005877 3.2e-06 57.0 123 39.0
Eucgr.F00977 Eucalyptus grandis HOM05D006536 ORTHO05D005877 5.5e-06 56.2 155 31.6
SalBow3G0084 Salvia bowleyana HOM05D003262 ORTHO05D003608 5.5e-06 56.2 161 27.3
PGR083G0291 Punica granatum HOM05D006536 ORTHO05D005877 7.2e-06 55.8 151 29.8
Sopen07g032350 Solanum pennellii HOM05D006536 ORTHO05D005877 7.2e-06 55.8 115 33.0
Sopen07g032360 Solanum pennellii HOM05D006536 ORTHO05D005877 7.2e-06 55.8 153 31.4
Sopen08g028810 Solanum pennellii HOM05D006536 ORTHO05D005877 7.2e-06 55.8 136 34.6
vmacro11762 Vaccinium macrocarpon HOM05D006536 ORTHO05D005877 7.2e-06 55.8 117 35.0
PSO541G2788 Papaver somniferum HOM05D006536 ORTHO05D005877 9.4e-06 55.5 150 29.3


User provided reference genes

Program Settings