Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0337741 Helianthus annuus HOM05D006334 ORTHO05D008320 9.9e-121 437.2 289 100.0
ECA236G0521 Erigeron canadensis HOM05D006334 ORTHO05D008320 9.3e-103 377.5 290 89.0
Lsat_1_v5_gn_7_109541 Lactuca sativa HOM05D006334 ORTHO05D008320 1.1e-95 354.0 290 80.0
RcHm_v2.0_Chr5g0037801 Rosa chinensis HOM05D006334 ORTHO05D008320 1.7e-88 330.1 291 72.9
CSS0039549 Camellia sinensis var. sinensis HOM05D006334 ORTHO05D008320 3.8e-88 328.9 292 75.0
MD11G1224700 Malus domestica HOM05D006334 ORTHO05D008320 1.8e-85 320.1 289 77.9
FAN11G3716 Fragaria x ananassa HOM05D006334 ORTHO05D008320 1.1e-84 317.4 289 72.7
FvH4_3g21950 Fragaria vesca HOM05D006334 ORTHO05D008320 2.5e-84 316.2 289 70.9
MD03G1210000 Malus domestica HOM05D006334 ORTHO05D008320 5.7e-84 315.1 289 73.7
DCAR_022532 Daucus carota HOM05D006334 ORTHO05D008320 1.7e-83 313.5 296 70.9
Dinv22296 Davidia involucrata HOM05D006334 ORTHO05D008320 2.2e-83 313.2 289 68.2
FAN25G1013 Fragaria x ananassa HOM05D006334 ORTHO05D008320 6.9e-82 308.1 285 73.0
Prupe.4G205200 Prunus persica HOM05D006334 ORTHO05D008320 2.6e-81 306.2 289 72.3
Lj8A166G85 Lonicera japonica HOM05D006334 ORTHO05D008320 1.7e-80 303.5 304 73.0
Potri.001G418900 Populus trichocarpa HOM05D006334 ORTHO05D008320 4.2e-79 298.9 291 61.9
RhsimUnG0252800 Rhododendron simsii HOM05D006334 ORTHO05D008320 2.1e-78 296.6 400 57.2
Manes.03G123900 Manihot esculenta HOM05D006334 ORTHO05D008320 2.7e-78 296.2 291 73.5
CiPaw.12G127100 Carya illinoinensis HOM05D006334 ORTHO05D008320 8.8e-77 291.2 289 69.2
MBI02_g23962_MAGBIO Magnolia biondii HOM05D006334 ORTHO05D008320 7.4e-76 288.1 289 75.1
GSVIVG01001978001 Vitis vinifera HOM05D006334 ORTHO05D008320 2.8e-75 286.2 289 70.2
PSO210G7302 Papaver somniferum HOM05D006334 ORTHO05D008320 4.8e-75 285.4 291 71.5
PSO832G3755 Papaver somniferum HOM05D006334 ORTHO05D008320 6.3e-75 285.0 291 70.4
Atru.chr2.3229 Acer truncatum HOM05D006334 ORTHO05D008320 5.3e-74 282.0 290 69.3
vmacro09744 Vaccinium macrocarpon HOM05D006334 ORTHO05D008320 9.1e-74 281.2 290 71.0
ClCG05G014700 Citrullus lanatus HOM05D006334 ORTHO05D008320 2.6e-73 279.6 289 67.1
Haze_09629 Corylus avellana HOM05D006334 ORTHO05D008320 1.7e-72 276.9 289 64.0
Sc07g0002760 Simmondsia chinensis HOM05D006334 ORTHO05D008320 2.9e-72 276.2 289 68.2
Nitab4.5_0002229g0170 Nicotiana tabacum HOM05D006334 ORTHO05D008320 1.9e-71 273.5 288 66.3
AUR62015668 Chenopodium quinoa HOM05D006334 ORTHO05D008320 4.2e-71 272.3 285 63.5
Ciclev10009059m.g Citrus clementina HOM05D006334 ORTHO05D008320 1.2e-70 270.8 289 69.2
CAN.G1110.6 Capsicum annuum HOM05D006334 ORTHO05D008320 1.6e-70 270.4 288 66.3
Sabra16G0284400 Salix brachista HOM05D006334 ORTHO05D008320 6.1e-70 268.5 290 65.9
Nitab4.5_0002342g0070 Nicotiana tabacum HOM05D006334 ORTHO05D008320 1.0e-69 267.7 289 63.7
TAR629G3436 Trochodendron aralioides HOM05D006334 ORTHO05D008320 1.0e-69 267.7 289 72.3
AUR62020535 Chenopodium quinoa HOM05D006334 ORTHO05D008320 2.3e-69 266.5 285 62.8
TWI38G1766 Tripterygium wilfordii HOM05D006334 ORTHO05D008320 3.0e-69 266.2 291 65.6
Thecc.07G050800 Theobroma cacao HOM05D006334 ORTHO05D008320 5.2e-69 265.4 292 71.6
Aqoxy1G03666 Aquilegia oxysepala HOM05D006334 ORTHO05D008320 6.7e-69 265.0 226 77.0
Ah.04g165560 Amaranthus hybridus HOM05D006334 ORTHO05D008320 1.5e-68 263.8 289 63.0
COL.COLO4_09585 Corchorus olitorius HOM05D006334 ORTHO05D008320 1.5e-68 263.8 289 67.8
Duzib268G1565 Durio zibethinus HOM05D006334 ORTHO05D008320 2.0e-68 263.5 292 69.2
Gorai.002G083500 Gossypium raimondii HOM05D006334 ORTHO05D008320 4.4e-68 262.3 290 69.7
Eucgr.F03434 Eucalyptus grandis HOM05D006334 ORTHO05D008320 7.4e-68 261.5 213 76.5
AUR62005409 Chenopodium quinoa HOM05D006334 ORTHO05D008320 9.7e-68 261.2 284 66.2
Haze_24344 Corylus avellana HOM05D003220 ORTHO05D003944 1.7e-67 260.4 289 61.2
Gohir.D01G062800 Gossypium hirsutum HOM05D006334 ORTHO05D008320 1.7e-67 260.4 290 67.2
AL7G25680 Arabidopsis lyrata HOM05D006334 ORTHO05D008320 2.8e-67 259.6 294 68.7
Nn1g07058 Nelumbo nucifera HOM05D006334 ORTHO05D008320 6.3e-67 258.5 289 70.6
Gohir.A01G075500 Gossypium hirsutum HOM05D006334 ORTHO05D008320 1.4e-66 257.3 290 66.9
arahy.Tifrunner.gnm1.ann1.Q0MPW2 Arachis hypogaea HOM05D006334 ORTHO05D008320 1.8e-66 256.9 288 64.6
arahy.Tifrunner.gnm1.ann1.9AY9GA Arachis hypogaea HOM05D006334 ORTHO05D008320 4.1e-66 255.8 288 64.6
Peaxi162Scf00407g00312 Petunia axillaris HOM05D006334 ORTHO05D008320 1.2e-65 254.2 289 64.0
CDE05G3377 Ceratophyllum demersum HOM05D006334 ORTHO05D008320 2.6e-65 253.1 289 60.9
Cfa020403 Carpinus fangiana HOM05D001306 ORTHO05D001159 4.5e-65 252.3 287 57.8
Hund23297 Selenicereus undatus HOM05D006334 ORTHO05D008320 1.7e-64 250.4 290 60.7
CARHR234770 Cardamine hirsuta HOM05D006334 ORTHO05D008320 2.2e-64 250.0 292 67.5
MELO3C018091.2 Cucumis melo HOM05D006334 ORTHO05D008320 5.0e-64 248.8 289 64.7
CsaV3_3G023200 Cucumis sativus L. HOM05D006334 ORTHO05D008320 1.1e-63 247.7 289 64.4
CsaV3_UNG104770 Cucumis sativus L. HOM05D006334 ORTHO05D008320 1.1e-63 247.7 289 64.4
Peaxi162Scf00450g00858 Petunia axillaris HOM05D006334 ORTHO05D008320 1.5e-63 247.3 303 64.0
QL08p012752 Quercus lobata HOM05D006334 ORTHO05D008320 1.5e-63 247.3 182 80.2
Cc05_g13330 Coffea canephora HOM05D006334 ORTHO05D008320 1.9e-63 246.9 291 64.9
QL08p012879 Quercus lobata HOM05D006334 ORTHO05D008320 3.2e-63 246.1 288 56.9
FAN21G3458 Fragaria x ananassa HOM05D006334 ORTHO05D008320 4.2e-63 245.7 302 64.2
Phvul.005G092400 Phaseolus vulgaris HOM05D006334 ORTHO05D008320 1.2e-62 244.2 288 60.8
PGSC0003DMG400014399 Solanum tuberosum HOM05D006334 ORTHO05D008320 1.2e-62 244.2 287 67.6
Solyc10g006460.3 Solanum lycopersicum HOM05D006334 ORTHO05D008320 6.1e-62 241.9 181 76.2
Aa31LG5G10300 Aethionema arabicum HOM05D006334 ORTHO05D008320 1.4e-61 240.7 291 64.9
Sopen10g002410 Solanum pennellii HOM05D006334 ORTHO05D008320 3.0e-61 239.6 137 86.1
Migut.M01801 Erythranthe guttata HOM05D006334 ORTHO05D008320 4.0e-61 239.2 139 84.2
AT4G27120 Arabidopsis thaliana HOM05D006334 ORTHO05D008320 1.2e-60 237.7 291 65.6
Carub.0007s1372 Capsella rubella HOM05D006334 ORTHO05D008320 2.0e-60 236.9 291 67.4
PGR031G1291 Punica granatum HOM05D006334 ORTHO05D008320 7.5e-60 235.0 182 80.8
SGA_v2.0_scaffold101G29789 Striga asiatica HOM05D006334 ORTHO05D008320 9.7e-60 234.6 140 82.9
THA.LOC104812531 Tarenaya hassleriana HOM05D006334 ORTHO05D008320 2.8e-59 233.0 288 65.6
Medtr2g083200 Medicago truncatula HOM05D006334 ORTHO05D008320 4.8e-59 232.3 180 77.8
Thhalv10025846m.g Eutrema salsugineum HOM05D006334 ORTHO05D008320 1.1e-58 231.1 291 67.4
MSTRG.27096 Avicennia marina HOM05D006334 ORTHO05D008320 4.1e-58 229.2 139 81.3
Glyma.13G288200 Glycine max HOM05D006334 ORTHO05D008320 5.3e-58 228.8 181 81.8
Sp7g25090 Schrenkiella parvula HOM05D006334 ORTHO05D008320 5.3e-58 228.8 291 67.4
HPP92_014117 Vanilla planifolia HOM05D006334 ORTHO05D008320 9.1e-58 228.0 278 65.5
Lj3g0002745 Lotus japonicus HOM05D006334 ORTHO05D008320 2.0e-57 226.9 290 60.3
VMungo1080G0184 Vigna mungo HOM05D006334 ORTHO05D008320 5.9e-57 225.3 181 78.5
Glyma.12G213500 Glycine max HOM05D006334 ORTHO05D008320 5.0e-56 222.2 137 82.5
Carub.0008s0614 Capsella rubella HOM05D006334 ORTHO05D008320 1.1e-55 221.1 183 79.8
Psat5g251960 Pisum sativum HOM05D006334 ORTHO05D008320 1.5e-55 220.7 287 57.8
Zm00001eb298180 Zea mays HOM05D006334 ORTHO05D008320 1.9e-55 220.3 168 71.4
Ca_01740_v3 Cicer arietinum L. HOM05D006334 ORTHO05D008320 1.6e-54 217.2 137 79.6
Os07g0103200 Oryza sativa ssp. japonica HOM05D006334 ORTHO05D008320 1.6e-54 217.2 280 60.4
BraA01t01781Z Brassica rapa HOM05D006334 ORTHO05D008320 3.6e-54 216.1 141 79.4
EL10Ac4g07940 Beta vulgaris HOM05D006334 ORTHO05D008320 4.7e-54 215.7 302 59.3
A03p57090 Brassica napus HOM05D006334 ORTHO05D008320 1.0e-53 214.5 142 78.9
BraA03t14779Z Brassica rapa HOM05D006334 ORTHO05D008320 1.0e-53 214.5 142 78.9
Lalb_Chr24g0400251 Lupinus albus HOM05D006334 ORTHO05D008320 1.0e-53 214.5 137 76.6
TPR.G19971 Trifolium pratense HOM05D006334 ORTHO05D008320 1.0e-53 214.5 137 79.6
BcaC06g32710 Brassica carinata HOM05D006334 ORTHO05D008320 4.0e-53 212.6 142 78.2
C07p54970 Brassica napus HOM05D006334 ORTHO05D008320 4.0e-53 212.6 142 78.2
BolC7t46013H Brassica oleracea HOM05D006334 ORTHO05D001501 2.6e-52 209.9 131 82.4
BcaNung03057 Brassica carinata HOM05D006334 ORTHO05D008320 5.7e-52 208.8 293 64.5
A01p18260 Brassica napus HOM05D006334 ORTHO05D008320 7.5e-52 208.4 125 83.2
Sed0009538 Sechium edule HOM05D006334 ORTHO05D008320 7.5e-52 208.4 282 63.8
Mapoly0114s0022 Marchantia polymorpha HOM05D006334 ORTHO05D008320 9.8e-52 208.0 296 56.8
BolC1t02259H Brassica oleracea HOM05D006334 ORTHO05D008320 2.2e-51 206.8 293 64.2
SEGI_34639 Sequoiadendron giganteum HOM05D006334 ORTHO05D008320 1.1e-50 204.5 168 79.8
C01p23260 Brassica napus HOM05D006334 ORTHO05D008320 3.1e-50 203.0 293 63.8
unitig_748.g7233 Utricularia gibba HOM05D006334 ORTHO05D008320 3.1e-50 203.0 284 57.4
Actinidia35324 Actinidia chinensis HOM05D006334 ORTHO05D008320 1.0e-48 198.0 103 92.2
Pp3c20_19360 Physcomitrium patens HOM05D006334 ORTHO05D008320 5.0e-48 195.7 178 70.8
AagrBONN_evm.TU.Sc2ySwM_228.581 Anthoceros agrestis HOM05D006334 ORTHO05D008320 6.8e-45 185.3 194 67.5
SMO143G0307 Selaginella moellendorffii HOM05D006334 ORTHO05D008320 1.3e-43 181.0 124 72.6
Actinidia10714 Actinidia chinensis HOM05D006334 ORTHO05D008320 3.7e-43 179.5 108 82.4
AagrBONN_evm.TU.Sc2ySwM_368.826 Anthoceros agrestis HOM05D006334 ORTHO05D008320 1.2e-41 174.5 167 71.3
CBR_g8852 Chara braunii HOM05D006334 ORTHO05D008320 2.1e-38 163.7 133 60.2
ATR0697G296 Amborella trichopoda HOM05D006334 ORTHO05D008320 7.0e-34 148.7 212 59.0
FAN16G3226 Fragaria x ananassa HOM05D006334 ORTHO05D008320 7.0e-34 148.7 189 68.3
Oeu032444.1 Olea europaea HOM05D006334 ORTHO05D008320 2.1e-30 137.1 75 85.3
Cre02.g101100 Chlamydomonas reinhardtii HOM05D006334 ORTHO05D008320 1.5e-28 131.0 119 54.6
Cpa.g.sc97.55 Carica papaya HOM05D006334 ORTHO05D008320 1.2e-25 121.3 202 58.4
FAN16G1435 Fragaria x ananassa HOM05D006334 ORTHO05D008320 3.0e-24 116.7 70 81.4
Cpa.g.sc97.53 Carica papaya HOM05D006334 ORTHO05D008320 4.7e-22 109.4 70 77.1
Haze_27349 Corylus avellana HOM05D006334 ORTHO05D008320 2.2e-19 100.5 276 37.3
BcaC09g50615 Brassica carinata HOM05D006334 ORTHO05D008320 6.0e-17 92.4 211 60.2
Actinidia35323 Actinidia chinensis HOM05D006334 ORTHO05D030819 2.9e-11 73.6 88 59.1


User provided reference genes

Program Settings