Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0337701 Helianthus annuus HOM05D006489 ORTHO05D007556 7.5e-206 720.3 372 100.0
Lsat_1_v5_gn_7_108561 Lactuca sativa HOM05D006489 ORTHO05D007556 6.2e-83 312.0 383 51.7
HanXRQChr03g0076541 Helianthus annuus HOM05D006489 ORTHO05D007556 2.7e-62 243.4 459 39.0
HanXRQChr08g0220561 Helianthus annuus HOM05D006489 ORTHO05D007556 6.4e-56 222.2 463 38.9
Lsat_1_v5_gn_9_94040 Lactuca sativa HOM05D006489 ORTHO05D007556 4.3e-52 209.5 456 38.4
ECA236G1547 Erigeron canadensis HOM05D006489 ORTHO05D007556 1.1e-50 204.9 165 62.4
ECA240G0124 Erigeron canadensis HOM05D006489 ORTHO05D007556 5.5e-47 192.6 478 34.7
vmacro09717 Vaccinium macrocarpon HOM05D006489 ORTHO05D007556 9.3e-47 191.8 482 35.9
Actinidia35341 Actinidia chinensis HOM05D006489 ORTHO05D007556 6.7e-45 185.7 486 34.2
Gohir.A08G019600 Gossypium hirsutum HOM05D006489 ORTHO05D007556 2.6e-41 173.7 456 34.4
Gorai.004G027700 Gossypium raimondii HOM05D006489 ORTHO05D007556 1.0e-40 171.8 472 33.5
Ciclev10008166m.g Citrus clementina HOM05D006489 ORTHO05D007556 1.3e-40 171.4 487 33.3
Dinv22265 Davidia involucrata HOM05D006489 ORTHO05D007556 5.0e-40 169.5 464 32.5
QL08p010454 Quercus lobata HOM05D006489 ORTHO05D007556 6.5e-40 169.1 514 31.5
Duzib213G0414 Durio zibethinus HOM05D006489 ORTHO05D007556 4.2e-39 166.4 458 33.0
Gohir.D08G030200 Gossypium hirsutum HOM05D006489 ORTHO05D007556 1.2e-38 164.9 472 33.1
Hma1.2p1_1162F.1_g262610 Hydrangea macrophylla HOM05D006489 ORTHO05D007556 6.1e-38 162.5 497 31.6
TAR627G0165 Trochodendron aralioides HOM05D006489 ORTHO05D007556 1.3e-37 161.4 487 32.4
GSVIVG01037644001 Vitis vinifera HOM05D006489 ORTHO05D007556 1.3e-35 154.8 434 34.6
RhsimUnG0250900 Rhododendron simsii HOM05D006489 ORTHO05D007556 2.8e-35 153.7 214 44.9
Oeu062694.1 Olea europaea HOM05D006489 ORTHO05D007556 1.8e-34 151.0 204 44.6
Hund23251 Selenicereus undatus HOM05D006489 ORTHO05D007556 1.8e-34 151.0 183 48.1
Migut.M01768 Erythranthe guttata HOM05D006489 ORTHO05D007556 9.1e-34 148.7 180 45.6
Sopen07g032750 Solanum pennellii HOM05D006489 ORTHO05D007556 1.2e-33 148.3 474 32.3
TWI15G0832 Tripterygium wilfordii HOM05D006489 ORTHO05D007556 1.2e-33 148.3 482 31.7
Atru.chr2.3342 Acer truncatum HOM05D006489 ORTHO05D007556 1.5e-33 147.9 172 47.7
COL.COLO4_19762 Corchorus olitorius HOM05D006489 ORTHO05D007556 2.6e-33 147.1 170 47.1
Sabra11G0125100 Salix brachista HOM05D006489 ORTHO05D007556 2.6e-33 147.1 502 30.5
Potri.011G139200 Populus trichocarpa HOM05D006489 ORTHO05D007556 3.4e-33 146.7 493 30.4
Solyc07g064570.3 Solanum lycopersicum HOM05D006489 ORTHO05D007556 3.4e-33 146.7 471 31.8
Peaxi162Scf00964g00023 Petunia axillaris HOM05D006489 ORTHO05D007556 5.9e-33 146.0 468 32.7
CiPaw.12G129400 Carya illinoinensis HOM05D006489 ORTHO05D007556 7.7e-33 145.6 532 30.3
CSS0036232 Camellia sinensis var. sinensis HOM05D006489 ORTHO05D007556 1.0e-32 145.2 533 30.0
CSS0017234 Camellia sinensis var. sinensis HOM05D006489 ORTHO05D007556 2.2e-32 144.1 533 30.2
EL10Ac4g07823 Beta vulgaris HOM05D006489 ORTHO05D007556 6.5e-32 142.5 177 45.8
Cc09_g09720 Coffea canephora HOM05D006489 ORTHO05D007556 1.1e-31 141.7 479 29.4
PGSC0003DMG400022321 Solanum tuberosum HOM05D006489 ORTHO05D007556 1.9e-31 141.0 483 31.7
Ca_06317_v3 Cicer arietinum L. HOM05D006489 ORTHO05D007556 3.2e-31 140.2 526 30.2
MBI18_g45561_MAGBIO Magnolia biondii HOM05D006489 ORTHO05D007556 7.2e-31 139.0 502 28.5
PSO675G7358 Papaver somniferum HOM05D006489 ORTHO05D007556 1.2e-30 138.3 209 42.6
SGA_v2.0_scaffold80G25948 Striga asiatica HOM05D006489 ORTHO05D007556 1.2e-30 138.3 170 48.2
ATR0752G219 Amborella trichopoda HOM05D006489 ORTHO05D007556 2.7e-30 137.1 218 41.3
Haze_09673 Corylus avellana HOM05D006489 ORTHO05D007556 2.7e-30 137.1 537 29.4
AUR62015766 Chenopodium quinoa HOM05D006489 ORTHO05D007556 7.9e-30 135.6 174 44.8
CAN.G337.129 Capsicum annuum HOM05D006489 ORTHO05D007556 3.0e-29 133.7 183 48.1
DCAR_022559 Daucus carota HOM05D006489 ORTHO05D007556 3.0e-29 133.7 215 44.2
PGR083G1541 Punica granatum HOM05D006489 ORTHO05D007556 3.0e-29 133.7 173 46.2
TPR.G1166 Trifolium pratense HOM05D006489 ORTHO05D007556 5.1e-29 132.9 228 39.5
Sc03g0008610 Simmondsia chinensis HOM05D006489 ORTHO05D007556 8.8e-29 132.1 167 44.9
Cpa.g.sc97.9 Carica papaya HOM05D006489 ORTHO05D007556 2.0e-28 131.0 168 48.2
Aqoxy1G03602 Aquilegia oxysepala HOM05D006489 ORTHO05D007556 7.4e-28 129.0 183 43.2
Ca_25386_v3 Cicer arietinum L. HOM05D006489 ORTHO05D007556 7.4e-28 129.0 320 34.1
Medtr5g092580 Medicago truncatula HOM05D006489 ORTHO05D007556 7.4e-28 129.0 209 40.7
Psat2g011040 Pisum sativum HOM05D006489 ORTHO05D007556 2.2e-27 127.5 253 36.4
Lalb_Chr17g0348451 Lupinus albus HOM05D006489 ORTHO05D007556 4.8e-27 126.3 221 41.2
Nitab4.5_0001913g0140 Nicotiana tabacum HOM05D006489 ORTHO05D007556 8.2e-27 125.6 422 31.5
MBI02_g07154_MAGBIO Magnolia biondii HOM05D006489 ORTHO05D007556 1.4e-26 124.8 182 41.8
Eucgr.F00766 Eucalyptus grandis HOM05D006489 ORTHO05D007556 4.1e-26 123.2 167 42.5
Glyma.14G024100 Glycine max HOM05D006489 ORTHO05D007556 4.1e-26 123.2 252 35.3
Cfa020351 Carpinus fangiana HOM05D006489 ORTHO05D007556 5.3e-26 122.9 565 28.1
Phvul.008G267300 Phaseolus vulgaris HOM05D006489 ORTHO05D007556 5.3e-26 122.9 263 35.4
CARHR096250 Cardamine hirsuta HOM05D006489 ORTHO05D007556 6.9e-26 122.5 479 29.9
CDE02G1695 Ceratophyllum demersum HOM05D006489 ORTHO05D007556 6.9e-26 122.5 166 41.6
VMungo0647G1504 Vigna mungo HOM05D006489 ORTHO05D007556 9.1e-26 122.1 253 34.4
MD03G1201600 Malus domestica HOM05D006489 ORTHO05D007556 1.2e-25 121.7 529 28.2
LjContig00272g0011286 Lotus japonicus HOM05D006489 ORTHO05D007556 2.0e-25 120.9 244 36.1
Glyma.02G290600 Glycine max HOM05D006489 ORTHO05D007556 5.9e-25 119.4 228 35.5
Lj1A872T56 Lonicera japonica HOM05D006489 ORTHO05D007556 1.0e-24 118.6 163 44.2
Sed0018772 Sechium edule HOM05D006489 ORTHO05D007556 1.3e-24 118.2 213 38.5
MELO3C013233.2 Cucumis melo HOM05D006489 ORTHO05D007556 1.7e-24 117.9 518 28.0
TPR.G36685 Trifolium pratense HOM05D006489 ORTHO05D007556 2.2e-24 117.5 204 41.2
Hma1.2p1_1162F.1_g262600 Hydrangea macrophylla HOM05D006489 ORTHO05D007556 2.9e-24 117.1 422 29.6
AT3G20490 Arabidopsis thaliana HOM05D006489 ORTHO05D007556 6.5e-24 115.9 245 33.9
Nitab4.5_0011175g0010 Nicotiana tabacum HOM05D006489 ORTHO05D007556 1.9e-23 114.4 422 30.3
Atru.BG.151.p Acer truncatum HOM05D006489 ORTHO05D007556 4.2e-23 113.2 298 32.6
AL3G34270 Arabidopsis lyrata HOM05D006489 ORTHO05D007556 5.5e-23 112.8 165 41.2
Lalb_Chr10g0106941 Lupinus albus HOM05D006489 ORTHO05D007556 5.5e-23 112.8 215 39.1
Aa31LG8G7280 Aethionema arabicum HOM05D006489 ORTHO05D007556 1.2e-22 111.7 164 41.5
arahy.Tifrunner.gnm1.ann1.I0Q6ZZ Arachis hypogaea HOM05D006489 ORTHO05D007556 1.2e-22 111.7 222 35.1
Manes.03G129000 Manihot esculenta HOM05D006489 ORTHO05D007556 1.2e-22 111.7 487 29.0
PSO541G0970 Papaver somniferum HOM05D006489 ORTHO05D007556 1.6e-22 111.3 478 31.4
Medtr6g033325 Medicago truncatula HOM05D006489 ORTHO05D007556 4.7e-22 109.8 213 35.7
CANSAT11G2482 Cannabis sativa HOM05D006489 ORTHO05D007556 8.0e-22 109.0 523 27.0
CDE05G3553 Ceratophyllum demersum HOM05D006489 ORTHO05D007556 8.0e-22 109.0 164 40.2
Prupe.4G212300 Prunus persica HOM05D006489 ORTHO05D007556 1.0e-21 108.6 214 35.5
arahy.Tifrunner.gnm1.ann1.X6VDEX Arachis hypogaea HOM05D006489 ORTHO05D007556 1.4e-21 108.2 222 34.7
Psat1g097920 Pisum sativum HOM05D006489 ORTHO05D007556 2.3e-21 107.5 181 39.2
HPP92_013323 Vanilla planifolia HOM05D006489 ORTHO05D007556 3.0e-21 107.1 170 39.4
Carub.0003s2045 Capsella rubella HOM05D006489 ORTHO05D007556 3.9e-21 106.7 244 33.2
Sed0021471 Sechium edule HOM05D006489 ORTHO05D007556 8.8e-21 105.5 214 37.9
Sp7g05570 Schrenkiella parvula HOM05D006489 ORTHO05D007556 2.6e-20 104.0 165 41.2
FAN25G3282 Fragaria x ananassa HOM05D006489 ORTHO05D007556 5.7e-20 102.8 216 36.1
THA.LOC104817868 Tarenaya hassleriana HOM05D006489 ORTHO05D007556 1.3e-19 101.7 209 35.4
BcaB06g27045 Brassica carinata HOM05D006489 ORTHO05D007556 1.7e-19 101.3 210 35.2
A04p10340 Brassica napus HOM05D006489 ORTHO05D007556 2.8e-19 100.5 194 35.1
BraA04t16706Z Brassica rapa HOM05D006489 ORTHO05D007556 2.8e-19 100.5 194 35.1
Nn1g03547 Nelumbo nucifera HOM05D006489 ORTHO05D007556 6.3e-19 99.4 489 26.2
BcaC02g09533 Brassica carinata HOM05D006489 ORTHO05D007556 2.4e-18 97.4 194 35.6
BolC4t25966H Brassica oleracea HOM05D006489 ORTHO05D007556 2.4e-18 97.4 194 35.6
C04p43850 Brassica napus HOM05D006489 ORTHO05D007556 3.1e-18 97.1 171 37.4
ClCG05G014300 Citrullus lanatus HOM05D006489 ORTHO05D007556 3.1e-18 97.1 213 35.2
Os04g0625100 Oryza sativa ssp. japonica HOM05D006489 ORTHO05D007556 5.3e-18 96.3 281 29.5
CsaV3_7G021220 Cucumis sativus L. HOM05D006489 ORTHO05D007556 5.0e-16 89.7 467 27.0
Zm00001eb431300 Zea mays HOM05D006489 ORTHO05D007556 5.0e-16 89.7 170 37.1
FAN21G0022 Fragaria x ananassa HOM05D006489 ORTHO05D007556 2.5e-15 87.4 408 28.4
Actinidia10733 Actinidia chinensis HOM05D006489 ORTHO05D007556 4.2e-15 86.7 182 36.8
RcHm_v2.0_Chr5g0039401 Rosa chinensis HOM05D006489 ORTHO05D007556 2.1e-14 84.3 411 28.5
AUR62020449 Chenopodium quinoa HOM05D006489 ORTHO05D007556 6.1e-14 82.8 165 34.5
SEGI_05401 Sequoiadendron giganteum HOM05D006489 ORTHO05D007556 1.4e-13 81.6 169 31.4
FvH4_3g22630 Fragaria vesca HOM05D006489 ORTHO05D007556 6.7e-13 79.3 411 29.0
Thhalv10028177m.g Eutrema salsugineum HOM05D006489 ORTHO05D007556 2.0e-12 77.8 195 32.3
Lj8A169G92 Lonicera japonica HOM05D006489 ORTHO05D007556 5.7e-12 76.3 62 58.1
Thecc.07G037900 Theobroma cacao HOM05D006489 ORTHO05D007556 1.7e-11 74.7 344 27.9
unitig_62.g23281 Utricularia gibba HOM05D008272 ORTHO05D010429 3.7e-11 73.6 401 25.9
Psat0s2568g0040 Pisum sativum HOM05D006489 ORTHO05D007556 5.3e-10 69.7 109 40.4
Mapoly0045s0076 Marchantia polymorpha HOM05D006489 ORTHO05D007556 4.7e-06 56.6 173 29.5


User provided reference genes

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