Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0337581 Helianthus annuus HOM05D003896 ORTHO05D004517 1.8e-46 188.7 85 100.0
MBI13_g20498_MAGBIO Magnolia biondii HOM05D003896 ORTHO05D004517 5.8e-29 130.6 70 80.0
Potri.002G069301 Populus trichocarpa HOM05D003896 ORTHO05D004517 5.8e-29 130.6 74 75.7
Eucgr.I02701 Eucalyptus grandis HOM05D003896 ORTHO05D004517 7.6e-29 130.2 68 80.9
RcHm_v2.0_Chr7g0225181 Rosa chinensis HOM05D003896 ORTHO05D004517 9.9e-29 129.8 70 78.6
THA.LOC109116537 Tarenaya hassleriana HOM05D003896 ORTHO05D004517 9.9e-29 129.8 68 82.4
FAN13G2961 Fragaria x ananassa HOM05D003896 ORTHO05D004517 1.7e-28 129.0 74 74.3
HanXRQChr11g0337591 Helianthus annuus HOM05D003896 ORTHO05D004517 1.7e-28 129.0 71 76.1
arahy.Tifrunner.gnm1.ann1.D7TB4J Arachis hypogaea HOM05D003896 ORTHO05D004517 2.2e-28 128.6 70 77.1
CDE04G2322 Ceratophyllum demersum HOM05D003896 ORTHO05D004517 2.2e-28 128.6 70 77.1
MBI13_g29655_MAGBIO Magnolia biondii HOM05D003896 ORTHO05D004517 2.9e-28 128.3 67 80.6
Nn5g28709 Nelumbo nucifera HOM05D003896 ORTHO05D004517 3.8e-28 127.9 68 79.4
Phvul.006G209400 Phaseolus vulgaris HOM05D003896 ORTHO05D004517 3.8e-28 127.9 68 77.9
Prupe.1G560700 Prunus persica HOM05D003896 ORTHO05D004517 3.8e-28 127.9 68 79.4
Lsat_1_v5_gn_7_79760 Lactuca sativa HOM05D003896 ORTHO05D004517 4.9e-28 127.5 58 93.1
Manes.02G178600 Manihot esculenta HOM05D003896 ORTHO05D004517 4.9e-28 127.5 68 79.4
Aqoxy5G02118 Aquilegia oxysepala HOM05D003896 ORTHO05D004517 6.4e-28 127.1 68 80.9
C08p17020 Brassica napus HOM05D003896 ORTHO05D004517 6.4e-28 127.1 76 72.4
BolC8t49327H Brassica oleracea HOM05D003896 ORTHO05D004517 6.4e-28 127.1 76 72.4
Haze_10788 Corylus avellana HOM05D003896 ORTHO05D004517 6.4e-28 127.1 76 72.4
PGR142G1796 Punica granatum HOM05D003896 ORTHO05D004517 6.4e-28 127.1 68 79.4
arahy.Tifrunner.gnm1.ann1.EN81KK Arachis hypogaea HOM05D003896 ORTHO05D004517 8.4e-28 126.7 68 77.9
Glyma.08G181800 Glycine max HOM05D003896 ORTHO05D004517 8.4e-28 126.7 68 77.9
Sed0011383 Sechium edule HOM05D003896 ORTHO05D004517 8.4e-28 126.7 77 68.8
CiPaw.05G040300 Carya illinoinensis HOM05D003896 ORTHO05D004517 1.1e-27 126.3 68 77.9
FAN04G1676 Fragaria x ananassa HOM05D003896 ORTHO05D004517 1.1e-27 126.3 85 65.9
Psat1g218920 Pisum sativum HOM05D003896 ORTHO05D004517 1.1e-27 126.3 68 76.5
TPR.G19749 Trifolium pratense HOM05D003896 ORTHO05D004517 1.1e-27 126.3 81 65.4
TAR628G1659 Trochodendron aralioides HOM05D003896 ORTHO05D004517 1.1e-27 126.3 68 79.4
Actinidia00232 Actinidia chinensis HOM05D003896 ORTHO05D004517 1.4e-27 125.9 68 79.4
AL1G27180 Arabidopsis lyrata HOM05D003896 ORTHO05D004517 1.4e-27 125.9 70 77.1
Sp1g13460 Schrenkiella parvula HOM05D003896 ORTHO05D004517 1.4e-27 125.9 70 77.1
VMungo0540G0553 Vigna mungo HOM05D000025 ORTHO05D000136 1.4e-27 125.9 74 70.3
Aa31LG1G40 Aethionema arabicum HOM05D003702 ORTHO05D004653 1.9e-27 125.6 68 79.4
Glyma.15G050500 Glycine max HOM05D003896 ORTHO05D004517 1.9e-27 125.6 68 76.5
Actinidia38960 Actinidia chinensis HOM05D003896 ORTHO05D004517 2.4e-27 125.2 68 79.4
arahy.Tifrunner.gnm1.ann1.Q4HF2T Arachis hypogaea HOM05D003896 ORTHO05D004517 2.4e-27 125.2 72 75.0
A08p31730 Brassica napus HOM05D003896 ORTHO05D004517 2.4e-27 125.2 76 69.7
Potri.005G190901 Populus trichocarpa HOM05D003896 ORTHO05D004517 2.4e-27 125.2 68 77.9
Aqoxy2G00844 Aquilegia oxysepala HOM05D003896 ORTHO05D004517 3.2e-27 124.8 68 77.9
arahy.Tifrunner.gnm1.ann1.MYBE61 Arachis hypogaea HOM05D003896 ORTHO05D004517 3.2e-27 124.8 70 77.1
MELO3C019495.2 Cucumis melo HOM05D003896 ORTHO05D004517 3.2e-27 124.8 68 76.5
Potri.002G069200 Populus trichocarpa HOM05D003896 ORTHO05D004517 3.2e-27 124.8 68 79.4
BcaB03g14560 Brassica carinata HOM05D003896 ORTHO05D004517 4.2e-27 124.4 70 75.7
BcaC05g25441 Brassica carinata HOM05D003896 ORTHO05D004517 4.2e-27 124.4 68 77.9
BolC5t30061H Brassica oleracea HOM05D003896 ORTHO05D004517 4.2e-27 124.4 68 77.9
Medtr2g008070 Medicago truncatula HOM05D003896 ORTHO05D004517 4.2e-27 124.4 74 70.3
CARHR015640 Cardamine hirsuta HOM05D003896 ORTHO05D004517 5.5e-27 124.0 68 77.9
Lj6g0000311 Lotus japonicus HOM05D003896 ORTHO05D004517 5.5e-27 124.0 68 77.9
ECA236G2466 Erigeron canadensis HOM05D003896 ORTHO05D004517 7.1e-27 123.6 68 76.5
FvH4_5g30500 Fragaria vesca HOM05D003896 ORTHO05D004517 7.1e-27 123.6 68 76.5
FAN18G4256 Fragaria x ananassa HOM05D003896 ORTHO05D004517 7.1e-27 123.6 68 76.5
Sed0019459 Sechium edule HOM05D003896 ORTHO05D004517 7.1e-27 123.6 71 73.2
A02p31670 Brassica napus HOM05D003896 ORTHO05D004517 9.3e-27 123.2 73 69.9
Manes.18G091100 Manihot esculenta HOM05D003896 ORTHO05D004517 9.3e-27 123.2 68 76.5
C02p49010 Brassica napus HOM05D003896 ORTHO05D004517 1.2e-26 122.9 72 69.4
Dinv19332 Davidia involucrata HOM05D003896 ORTHO05D004517 1.2e-26 122.9 68 73.5
CsaV3_3G018780 Cucumis sativus L. HOM05D003896 ORTHO05D004517 1.6e-26 122.5 68 75.0
Dinv05188 Davidia involucrata HOM05D003896 ORTHO05D004517 1.6e-26 122.5 78 67.9
TWI14G0008 Tripterygium wilfordii HOM05D003896 ORTHO05D004517 2.1e-26 122.1 68 73.5
Aa31LG2G8780 Aethionema arabicum HOM05D003896 ORTHO05D004517 2.7e-26 121.7 68 75.0
Thhalv10001040m.g Eutrema salsugineum HOM05D003896 ORTHO05D004517 3.5e-26 121.3 68 75.0
MD08G1223400 Malus domestica HOM05D003896 ORTHO05D004517 3.5e-26 121.3 68 75.0
Atru.chr6.939 Acer truncatum HOM05D003896 ORTHO05D004517 4.6e-26 120.9 68 75.0
AT1G15120 Arabidopsis thaliana HOM05D003896 ORTHO05D004517 4.6e-26 120.9 68 76.5
BolC8t52063H Brassica oleracea HOM05D003896 ORTHO05D004517 4.6e-26 120.9 70 72.9
MD05G1023300 Malus domestica HOM05D003896 ORTHO05D004517 4.6e-26 120.9 70 75.7
BcaB03g13075 Brassica carinata HOM05D003896 ORTHO05D004517 6.0e-26 120.6 71 71.8
QL11p018723 Quercus lobata HOM05D003896 ORTHO05D004517 6.0e-26 120.6 69 69.6
CANSAT11G1560 Cannabis sativa HOM05D003896 ORTHO05D004517 7.9e-26 120.2 68 75.0
Thecc.02G044000 Theobroma cacao HOM05D003896 ORTHO05D004517 7.9e-26 120.2 68 72.1
ATR0772G203 Amborella trichopoda HOM05D003896 ORTHO05D004517 1.0e-25 119.8 72 72.2
BcaC07g38769 Brassica carinata HOM05D003896 ORTHO05D004517 1.0e-25 119.8 71 71.8
BolC2t10995H Brassica oleracea HOM05D003896 ORTHO05D004517 1.3e-25 119.4 77 67.5
BraA08t35095Z Brassica rapa HOM05D003896 ORTHO05D004517 1.3e-25 119.4 68 75.0
Sc02g0004100 Simmondsia chinensis HOM05D003896 ORTHO05D004517 1.3e-25 119.4 68 76.5
TWI23G0468 Tripterygium wilfordii HOM05D003896 ORTHO05D004517 1.8e-25 119.0 68 72.1
THA.LOC109117087 Tarenaya hassleriana HOM05D003896 ORTHO05D004517 2.3e-25 118.6 68 77.9
Dinv01060 Davidia involucrata HOM05D003896 ORTHO05D004517 3.0e-25 118.2 68 72.1
Nn1g06112 Nelumbo nucifera HOM05D003896 ORTHO05D004517 3.0e-25 118.2 68 75.0
Carub.0001s1488 Capsella rubella HOM05D003896 ORTHO05D004517 3.9e-25 117.9 68 73.5
Cpa.g.sc2.46 Carica papaya HOM05D003896 ORTHO05D004517 3.9e-25 117.9 75 68.0
FAN03G2302 Fragaria x ananassa HOM05D003896 ORTHO05D004517 3.9e-25 117.9 68 76.5
Gohir.D01G001100 Gossypium hirsutum HOM05D003896 ORTHO05D004517 3.9e-25 117.9 68 73.5
BraA02t08170Z Brassica rapa HOM05D003896 ORTHO05D004517 5.1e-25 117.5 68 72.1
FvH4_7g02900 Fragaria vesca HOM05D003896 ORTHO05D004517 5.1e-25 117.5 66 78.8
Atru.chr13.2169 Acer truncatum HOM05D003896 ORTHO05D004517 6.7e-25 117.1 66 75.8
Manes.18G073709 Manihot esculenta HOM05D003896 ORTHO05D004517 6.7e-25 117.1 68 75.0
Manes.18G090900 Manihot esculenta HOM05D003896 ORTHO05D004517 6.7e-25 117.1 68 75.0
Lsat_1_v5_gn_9_116680 Lactuca sativa HOM05D003896 ORTHO05D004517 8.7e-25 116.7 72 66.7
TWI34G0745 Tripterygium wilfordii HOM05D003896 ORTHO05D004517 1.5e-24 115.9 66 77.3
CiPaw.06G150500 Carya illinoinensis HOM05D003896 ORTHO05D004517 1.9e-24 115.5 68 73.5
Duzib052G0314 Durio zibethinus HOM05D003896 ORTHO05D004517 2.5e-24 115.2 68 70.6
Gohir.A01G001400 Gossypium hirsutum HOM05D003896 ORTHO05D004517 2.5e-24 115.2 68 70.6
Hma1.2p1_1800F.1_g302950 Hydrangea macrophylla HOM05D003896 ORTHO05D004517 2.5e-24 115.2 67 73.1
Os11g0162200 Oryza sativa ssp. japonica HOM05D003896 ORTHO05D004517 2.5e-24 115.2 68 70.6
GSVIVG01034509001 Vitis vinifera HOM05D003896 ORTHO05D004517 2.5e-24 115.2 82 64.6
Dinv24242 Davidia involucrata HOM05D003896 ORTHO05D004517 3.3e-24 114.8 68 72.1
CSS0003096 Camellia sinensis var. sinensis HOM05D003896 ORTHO05D004517 4.3e-24 114.4 68 72.1
CSS0009103 Camellia sinensis var. sinensis HOM05D003896 ORTHO05D004517 4.3e-24 114.4 68 72.1
FAN06G4594 Fragaria x ananassa HOM05D003896 ORTHO05D004517 4.3e-24 114.4 66 77.3
FAN17G0735 Fragaria x ananassa HOM05D003896 ORTHO05D004517 4.3e-24 114.4 68 67.6
vmacro22914 Vaccinium macrocarpon HOM05D003896 ORTHO05D004517 4.3e-24 114.4 75 62.7
A06p11120 Brassica napus HOM05D003896 ORTHO05D004517 5.6e-24 114.0 67 70.1
CDE04G0116 Ceratophyllum demersum HOM05D003896 ORTHO05D004517 5.6e-24 114.0 68 75.0
Gohir.A12G033300 Gossypium hirsutum HOM05D003896 ORTHO05D004517 5.6e-24 114.0 68 73.5
Gohir.D12G039500 Gossypium hirsutum HOM05D003896 ORTHO05D004517 5.6e-24 114.0 68 73.5
Nitab4.5_0000078g0350 Nicotiana tabacum HOM05D003896 ORTHO05D004517 5.6e-24 114.0 68 75.0
Nitab4.5_0004027g0040 Nicotiana tabacum HOM05D003896 ORTHO05D004517 5.6e-24 114.0 68 75.0
ECA240G1941 Erigeron canadensis HOM05D003620 ORTHO05D004261 7.4e-24 113.6 66 69.7
BraA06t24292Z Brassica rapa HOM05D003896 ORTHO05D004517 9.6e-24 113.2 67 68.7
Peaxi162Scf00067g02527 Petunia axillaris HOM05D003896 ORTHO05D004517 9.6e-24 113.2 68 75.0
CARHR143640 Cardamine hirsuta HOM05D003896 ORTHO05D004517 1.6e-23 112.5 66 69.7
Sc26g0002640 Simmondsia chinensis HOM05D003896 ORTHO05D004517 1.6e-23 112.5 68 73.5
Sopen09g029690 Solanum pennellii HOM05D003896 ORTHO05D004517 1.6e-23 112.5 85 65.9
Solyc09g074870.4 Solanum lycopersicum HOM05D003896 ORTHO05D004517 2.1e-23 112.1 84 65.5
Solyc09g150155.1 Solanum lycopersicum HOM05D003896 ORTHO05D004517 2.1e-23 112.1 71 69.0
Duzib132G0061 Durio zibethinus HOM05D003896 ORTHO05D004517 2.8e-23 111.7 68 70.6
FAN12G2386 Fragaria x ananassa HOM05D003896 ORTHO05D004517 3.7e-23 111.3 68 66.2
Prupe.8G028000 Prunus persica HOM05D003896 ORTHO05D004517 3.7e-23 111.3 68 72.1
Duzib248G1617 Durio zibethinus HOM05D003896 ORTHO05D004517 6.2e-23 110.5 68 67.6
Sabra02G0054300 Salix brachista HOM05D004716 ORTHO05D005646 6.2e-23 110.5 67 68.7
AUR62035137 Chenopodium quinoa HOM05D003896 ORTHO05D004517 8.2e-23 110.2 69 69.6
AUR62042907 Chenopodium quinoa HOM05D003896 ORTHO05D004517 8.2e-23 110.2 69 69.6
EL10Ac1g01528 Beta vulgaris HOM05D003896 ORTHO05D004517 1.1e-22 109.8 69 68.1
PSO210G7830 Papaver somniferum HOM05D003896 ORTHO05D004517 1.1e-22 109.8 68 67.6
PSO238G0030 Papaver somniferum HOM05D003896 ORTHO05D004517 1.1e-22 109.8 68 67.6
PGSC0003DMG400011391 Solanum tuberosum HOM05D003896 ORTHO05D004517 1.1e-22 109.8 68 70.6
BcaB02g06577 Brassica carinata HOM05D003896 ORTHO05D004517 1.4e-22 109.4 80 60.0
TAR381G0439 Trochodendron aralioides HOM05D003896 ORTHO05D004517 1.4e-22 109.4 59 74.6
A09p61560 Brassica napus HOM05D003896 ORTHO05D004517 1.8e-22 109.0 70 62.9
BraA09t41529Z Brassica rapa HOM05D003896 ORTHO05D004517 1.8e-22 109.0 70 62.9
C05p13240 Brassica napus HOM05D003896 ORTHO05D004517 2.4e-22 108.6 59 74.6
Ciclev10002923m.g Citrus clementina HOM05D003896 ORTHO05D004517 3.1e-22 108.2 72 66.7
CAN.G339.37 Capsicum annuum HOM05D003896 ORTHO05D004517 4.0e-22 107.8 68 69.1
CBR_g10999 Chara braunii HOM05D003896 ORTHO05D004517 5.3e-22 107.5 69 65.2
Sabra05G0145900 Salix brachista HOM05D003896 ORTHO05D004517 5.3e-22 107.5 71 66.2
Thecc.08G150500 Theobroma cacao HOM05D003896 ORTHO05D004517 5.3e-22 107.5 68 64.7
C08p45150 Brassica napus HOM05D003896 ORTHO05D004517 1.2e-21 106.3 61 70.5
Thhalv10009667m.g Eutrema salsugineum HOM05D003896 ORTHO05D004517 1.2e-21 106.3 59 72.9
FAN08G0225 Fragaria x ananassa HOM05D003896 ORTHO05D004517 3.4e-21 104.8 56 75.0
Oeu012724.1 Olea europaea HOM05D003896 ORTHO05D004517 5.8e-21 104.0 68 66.2
SalBow6G5306 Salvia bowleyana HOM05D003896 ORTHO05D004517 5.8e-21 104.0 66 62.1
AT2G01090 Arabidopsis thaliana HOM05D003896 ORTHO05D004517 7.6e-21 103.6 55 72.7
Gorai.002G001600 Gossypium raimondii HOM05D003896 ORTHO05D004517 7.6e-21 103.6 59 71.2
Mapoly0020s0072 Marchantia polymorpha HOM05D003896 ORTHO05D004517 7.6e-21 103.6 66 63.6
TAR625G1245 Trochodendron aralioides HOM05D003896 ORTHO05D004517 7.6e-21 103.6 60 70.0
Migut.B00649 Erythranthe guttata HOM05D003896 ORTHO05D004517 1.3e-20 102.8 68 66.2
Migut.N01017 Erythranthe guttata HOM05D003896 ORTHO05D004517 2.2e-20 102.1 68 63.2
Gorai.008G041200 Gossypium raimondii HOM05D003896 ORTHO05D004517 2.2e-20 102.1 64 65.6
AagrBONN_evm.TU.Sc2ySwM_228.2620 Anthoceros agrestis HOM05D003896 ORTHO05D004517 2.9e-20 101.7 68 63.2
Peaxi162Scf00152g01234 Petunia axillaris HOM05D003896 ORTHO05D004517 2.9e-20 101.7 97 53.6
CAN.G339.36 Capsicum annuum HOM05D000541 ORTHO05D000137 3.8e-20 101.3 61 73.8
Duzib116G0919 Durio zibethinus HOM05D003896 ORTHO05D004517 3.8e-20 101.3 68 64.7
unitig_578.g15948 Utricularia gibba HOM05D003896 ORTHO05D004517 4.9e-20 100.9 68 64.7
COL.COLO4_37834 Corchorus olitorius HOM05D004026 ORTHO05D004712 8.4e-20 100.1 66 68.2
Pp3c26_10210 Physcomitrium patens HOM05D003896 ORTHO05D004517 5.5e-19 97.4 64 65.6
Pp3c26_10390 Physcomitrium patens HOM05D003896 ORTHO05D004517 5.5e-19 97.4 64 65.6
FAN07G2777 Fragaria x ananassa HOM05D003896 ORTHO05D004517 7.1e-19 97.1 59 62.7
Gohir.A02G111100 Gossypium hirsutum HOM05D003896 ORTHO05D004517 2.1e-18 95.5 68 63.2
Gorai.013G108600 Gossypium raimondii HOM05D003896 ORTHO05D004517 2.7e-18 95.1 68 61.8
PRCOL_00005271 Prasinoderma coloniale HOM05D003896 ORTHO05D004517 6.0e-18 94.0 66 62.1
Gohir.D03G062900 Gossypium hirsutum HOM05D003896 ORTHO05D004517 7.9e-18 93.6 68 60.3
Zm00001eb202390 Zea mays HOM05D003896 ORTHO05D004517 7.9e-18 93.6 56 67.9
Pp3c19_20470 Physcomitrium patens HOM05D003896 ORTHO05D004517 1.3e-17 92.8 76 55.3
Zm00001eb139450 Zea mays HOM05D003896 ORTHO05D004517 1.8e-17 92.4 56 62.5
Nitab4.5_0005474g0030 Nicotiana tabacum HOM05D003896 ORTHO05D004517 3.0e-17 91.7 61 63.9
CBR_g10998 Chara braunii HOM05D016306 ORTHO05D018315 8.7e-17 90.1 65 58.5
MCO16G078 Micromonas commoda HOM05D003896 ORTHO05D004517 5.7e-16 87.4 68 55.9
Nitab4.5_0013344g0010 Nicotiana tabacum HOM05D003896 ORTHO05D004517 4.8e-15 84.3 49 67.3
SMO117G0126 Selaginella moellendorffii HOM05D003896 ORTHO05D004517 5.3e-14 80.9 54 57.4
Duzib132G0328 Durio zibethinus HOM05D003896 ORTHO05D004517 6.9e-14 80.5 42 78.6
ClCG05G009840 Citrullus lanatus HOM05D003896 ORTHO05D004517 1.5e-13 79.3 41 78.0
Atru.chr6.943 Acer truncatum HOM05D003896 ORTHO05D004517 2.6e-13 78.6 41 78.0
PGSC0003DMG400011392 Solanum tuberosum HOM05D003896 ORTHO05D004517 7.2e-11 70.5 45 62.2
Thhalv10028069m.g Eutrema salsugineum HOM05D003896 ORTHO05D004517 4.6e-10 67.8 43 67.4
Thhalv10029056m.g Eutrema salsugineum HOM05D003896 ORTHO05D004517 4.6e-10 67.8 43 67.4
Os02g0541700 Oryza sativa ssp. japonica HOM05D003896 ORTHO05D004517 4.6e-10 67.8 68 52.9
Zm00001eb181710 Zea mays HOM05D003896 ORTHO05D004517 1.0e-09 66.6 68 50.0
Zm00001eb243140 Zea mays HOM05D003896 ORTHO05D004517 3.0e-09 65.1 68 50.0
unitig_8.g2965 Utricularia gibba HOM05D003896 ORTHO05D004517 5.1e-09 64.3 34 64.7
COL.COLO4_17923 Corchorus olitorius HOM05D003896 ORTHO05D004517 8.8e-09 63.5 45 57.8
FAN22G1408 Fragaria x ananassa HOM05D003896 ORTHO05D004517 9.7e-08 60.1 36 66.7
arahy.Tifrunner.gnm1.ann1.13ME4F Arachis hypogaea HOM05D000724 ORTHO05D015426 2.2e-07 58.9 48 56.2


User provided reference genes

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