Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0337491 Helianthus annuus HOM05D005305 ORTHO05D006394 2.3e-166 589.0 322 100.0
Lsat_1_v5_gn_7_79481 Lactuca sativa HOM05D005305 ORTHO05D006394 1.6e-71 273.9 345 51.0
ECA236G3147 Erigeron canadensis HOM05D005305 ORTHO05D006394 2.8e-63 246.5 299 51.5
HanXRQChr10g0300271 Helianthus annuus HOM05D005305 ORTHO05D006394 2.3e-41 173.7 186 50.0
Dinv19341 Davidia involucrata HOM05D005305 ORTHO05D006394 5.8e-37 159.1 196 46.9
Lsat_1_v5_gn_5_107520 Lactuca sativa HOM05D005305 ORTHO05D006394 1.3e-36 157.9 236 41.5
HanXRQChr10g0294801 Helianthus annuus HOM05D005305 ORTHO05D006394 6.6e-33 145.6 242 37.6
Ca_00097_v3 Cicer arietinum L. HOM05D005305 ORTHO05D006394 8.7e-33 145.2 177 50.3
Ca_29935_v3 Cicer arietinum L. HOM05D005305 ORTHO05D006394 8.7e-33 145.2 177 50.3
Actinidia33832 Actinidia chinensis HOM05D005305 ORTHO05D006394 9.6e-32 141.7 171 49.7
Medtr2g007870 Medicago truncatula HOM05D005305 ORTHO05D006394 1.3e-31 141.4 180 44.4
TPR.G19715 Trifolium pratense HOM05D005305 ORTHO05D006394 4.8e-31 139.4 173 46.8
Lj1C922T21 Lonicera japonica HOM05D005305 ORTHO05D006394 1.4e-30 137.9 194 43.8
Psat1g219600 Pisum sativum HOM05D005305 ORTHO05D006394 1.4e-30 137.9 241 41.5
CSS0043111 Camellia sinensis var. sinensis HOM05D005305 ORTHO05D006394 2.4e-30 137.1 194 44.8
Sed0001621 Sechium edule HOM05D005305 ORTHO05D006394 2.0e-29 134.0 153 48.4
Lj6g0020123 Lotus japonicus HOM05D005305 ORTHO05D006394 2.6e-29 133.7 190 44.7
Aqoxy6G00392 Aquilegia oxysepala HOM05D005305 ORTHO05D006394 4.5e-29 132.9 162 46.3
Glyma.08G183700 Glycine max HOM05D005305 ORTHO05D006394 2.9e-28 130.2 177 44.1
Sed0003606 Sechium edule HOM05D005305 ORTHO05D006394 7.1e-27 125.6 185 43.2
Phvul.006G211300 Phaseolus vulgaris HOM05D005305 ORTHO05D006394 9.3e-27 125.2 166 43.4
MBI17_g24510_MAGBIO Magnolia biondii HOM05D005305 ORTHO05D006394 1.6e-26 124.4 160 42.5
VMungo0540G1828 Vigna mungo HOM05D005305 ORTHO05D006394 2.1e-26 124.0 170 43.5
CiPaw.05G041500 Carya illinoinensis HOM05D005305 ORTHO05D006394 4.6e-26 122.9 194 43.8
CsaV3_6G037300 Cucumis sativus L. HOM05D005305 ORTHO05D006394 6.0e-26 122.5 161 44.7
ClCG09G014160 Citrullus lanatus HOM05D005305 ORTHO05D006394 1.0e-25 121.7 158 45.6
MELO3C014385.2 Cucumis melo HOM05D005305 ORTHO05D006394 1.0e-25 121.7 231 36.8
MD15G1420000 Malus domestica HOM05D005305 ORTHO05D006394 1.0e-25 121.7 189 39.7
Nn5g28774 Nelumbo nucifera HOM05D005305 ORTHO05D006394 1.1e-24 118.2 165 42.4
AL1G27270 Arabidopsis lyrata HOM05D005305 ORTHO05D006394 1.5e-24 117.9 140 47.1
ECA234G0387 Erigeron canadensis HOM05D005305 ORTHO05D006394 7.4e-24 115.5 144 41.7
AT1G15190 Arabidopsis thaliana HOM05D005305 ORTHO05D006394 1.6e-23 114.4 140 45.7
Lalb_Chr15g0090581 Lupinus albus HOM05D005305 ORTHO05D006394 1.6e-23 114.4 160 43.1
BcaB02g06584 Brassica carinata HOM05D005305 ORTHO05D006394 2.1e-23 114.0 134 47.0
A06p11170 Brassica napus HOM05D005305 ORTHO05D006394 2.1e-23 114.0 134 47.0
BolC5t30066H Brassica oleracea HOM05D005305 ORTHO05D006394 2.8e-23 113.6 134 47.0
BcaC05g25447 Brassica carinata HOM05D005305 ORTHO05D006394 4.8e-23 112.8 134 47.0
C05p13290 Brassica napus HOM05D005305 ORTHO05D006394 4.8e-23 112.8 134 47.0
BraA06t24297Z Brassica rapa HOM05D005305 ORTHO05D006394 4.8e-23 112.8 134 46.3
Aa31LG2G8790 Aethionema arabicum HOM05D005305 ORTHO05D006394 6.2e-23 112.5 188 39.4
Oeu000200.2 Olea europaea HOM05D005305 ORTHO05D006394 6.2e-23 112.5 161 43.5
Thhalv10009974m.g Eutrema salsugineum HOM05D005305 ORTHO05D006394 1.1e-22 111.7 137 45.3
Ciclev10001162m.g Citrus clementina HOM05D005305 ORTHO05D006394 2.4e-22 110.5 247 35.6
arahy.Tifrunner.gnm1.ann1.I1A2NR Arachis hypogaea HOM05D005305 ORTHO05D006394 4.0e-22 109.8 183 38.3
Atru.chr6.974 Acer truncatum HOM05D005305 ORTHO05D006394 5.3e-22 109.4 185 36.2
MBI17_g24663_MAGBIO Magnolia biondii HOM05D005305 ORTHO05D006394 5.3e-22 109.4 160 40.0
Carub.0001s1494 Capsella rubella HOM05D005305 ORTHO05D006394 6.9e-22 109.0 140 44.3
RcHm_v2.0_Chr7g0223251 Rosa chinensis HOM05D005305 ORTHO05D006394 6.9e-22 109.0 167 42.5
arahy.Tifrunner.gnm1.ann1.ZL3PAB Arachis hypogaea HOM05D005305 ORTHO05D006394 1.2e-21 108.2 184 37.0
Prupe.1G566000 Prunus persica HOM05D005305 ORTHO05D006394 1.5e-21 107.8 192 39.1
Sp1g13500 Schrenkiella parvula HOM05D005305 ORTHO05D006394 2.6e-21 107.1 134 46.3
Sp2g12560 Schrenkiella parvula HOM05D005305 ORTHO05D006394 9.9e-21 105.1 173 39.3
BolC2t10994H Brassica oleracea HOM05D005305 ORTHO05D006394 2.9e-20 103.6 163 38.7
BcaB03g13072 Brassica carinata HOM05D005305 ORTHO05D006394 3.8e-20 103.2 170 40.0
BraA08t35092Z Brassica rapa HOM05D005305 ORTHO05D006394 3.8e-20 103.2 168 40.5
A08p31700 Brassica napus HOM05D005305 ORTHO05D006394 4.9e-20 102.8 167 40.1
COL.COLO4_22382 Corchorus olitorius HOM05D005305 ORTHO05D006394 4.9e-20 102.8 155 44.5
BcaC07g38772 Brassica carinata HOM05D005305 ORTHO05D006394 8.4e-20 102.1 168 39.9
C08p17050 Brassica napus HOM05D005305 ORTHO05D006394 8.4e-20 102.1 168 39.9
BolC8t49330H Brassica oleracea HOM05D005305 ORTHO05D006394 8.4e-20 102.1 168 39.9
A02p31660 Brassica napus HOM05D005305 ORTHO05D006394 1.1e-19 101.7 162 38.9
TAR624G0561 Trochodendron aralioides HOM05D005305 ORTHO05D006394 1.4e-19 101.3 167 37.1
QL11p019060 Quercus lobata HOM05D005305 ORTHO05D006394 3.2e-19 100.1 317 31.2
CARHR015700 Cardamine hirsuta HOM05D005305 ORTHO05D006394 7.1e-19 99.0 140 39.3
Nn1g06067 Nelumbo nucifera HOM05D005305 ORTHO05D006394 7.1e-19 99.0 163 38.7
FAN13G2550 Fragaria x ananassa HOM05D005305 ORTHO05D006394 1.2e-18 98.2 212 35.4
PSO730G0002 Papaver somniferum HOM05D005305 ORTHO05D006394 1.2e-18 98.2 211 33.6
FvH4_5g29740 Fragaria vesca HOM05D005305 ORTHO05D006394 1.6e-18 97.8 167 38.3
Gohir.D12G092500 Gossypium hirsutum HOM05D005305 ORTHO05D006394 1.6e-18 97.8 167 41.3
Gorai.008G100000 Gossypium raimondii HOM05D005305 ORTHO05D006394 1.6e-18 97.8 167 41.3
Duzib187G0918 Durio zibethinus HOM05D005305 ORTHO05D006394 2.7e-18 97.1 179 39.1
FAN08G2621 Fragaria x ananassa HOM05D005305 ORTHO05D006394 6.0e-18 95.9 331 29.3
PGR042G0513 Punica granatum HOM05D005305 ORTHO05D006394 1.8e-17 94.4 175 34.9
SalBow5G2993 Salvia bowleyana HOM05D005305 ORTHO05D006394 1.8e-17 94.4 167 40.1
Thecc.01G118700 Theobroma cacao HOM05D005305 ORTHO05D006394 2.3e-17 94.0 170 40.0
Ah.03g133360 Amaranthus hybridus HOM05D005305 ORTHO05D006394 3.0e-17 93.6 190 34.7
FAN04G1743 Fragaria x ananassa HOM05D005305 ORTHO05D006394 5.1e-17 92.8 167 35.9
Gohir.A11G210433 Gossypium hirsutum HOM05D005305 ORTHO05D006394 1.1e-16 91.7 196 37.2
unitig_32.g10686 Utricularia gibba HOM05D005305 ORTHO05D006394 1.1e-16 91.7 150 42.0
Sc04g0009640 Simmondsia chinensis HOM05D005305 ORTHO05D006394 3.3e-16 90.1 181 38.7
Sopen11g001490 Solanum pennellii HOM05D005305 ORTHO05D006394 3.3e-16 90.1 147 38.8
PGSC0003DMG400035592 Solanum tuberosum HOM05D005305 ORTHO05D006394 7.4e-16 89.0 147 39.5
TWI31G0537 Tripterygium wilfordii HOM05D005305 ORTHO05D006394 2.1e-15 87.4 160 38.8
FAN22G2313 Fragaria x ananassa HOM05D005305 ORTHO05D006394 8.1e-15 85.5 166 34.9
Nitab4.5_0001582g0090 Nicotiana tabacum HOM05D005305 ORTHO05D006394 8.1e-15 85.5 144 38.9
TWI79G0764 Tripterygium wilfordii HOM05D005305 ORTHO05D006394 8.1e-15 85.5 160 38.1
AUR62024239 Chenopodium quinoa HOM05D005305 ORTHO05D006394 1.1e-14 85.1 151 37.1
Migut.L00049 Erythranthe guttata HOM05D005305 ORTHO05D006394 1.1e-14 85.1 159 37.7
FvH4_2g02450 Fragaria vesca HOM05D005305 ORTHO05D006394 1.1e-14 85.1 169 36.7
Oeu035198.1 Olea europaea HOM05D005305 ORTHO05D006394 1.1e-14 85.1 151 36.4
CAN.G516.6 Capsicum annuum HOM05D005305 ORTHO05D006394 1.4e-14 84.7 155 37.4
BraA02t08169Z Brassica rapa HOM05D005305 ORTHO05D006394 3.1e-14 83.6 163 35.6
Solyc11g005490.1 Solanum lycopersicum HOM05D005305 ORTHO05D006394 3.1e-14 83.6 182 35.2
Atru.chr4.616 Acer truncatum HOM05D005305 ORTHO05D006394 5.3e-14 82.8 160 36.2
FAN15G2678 Fragaria x ananassa HOM05D005305 ORTHO05D006394 6.9e-14 82.4 180 35.6
AUR62005501 Chenopodium quinoa HOM05D005305 ORTHO05D006394 1.2e-13 81.6 151 35.8
SGA_v2.0_scaffold47G17682 Striga asiatica HOM05D005305 ORTHO05D006394 1.2e-13 81.6 157 37.6
Sabra19G0004600 Salix brachista HOM05D005305 ORTHO05D006394 2.6e-13 80.5 164 32.3
Nitab4.5_0002138g0070 Nicotiana tabacum HOM05D005305 ORTHO05D006394 3.4e-13 80.1 145 37.9
Manes.13G081800 Manihot esculenta HOM05D005305 ORTHO05D006394 4.5e-13 79.7 156 37.2
Cpa.g.sc72.34 Carica papaya HOM05D005305 ORTHO05D006394 7.6e-13 79.0 160 38.1
DCAR_001409 Daucus carota HOM05D005305 ORTHO05D006394 2.2e-12 77.4 159 36.5
Potri.001G306800 Populus trichocarpa HOM05D005305 ORTHO05D006394 3.8e-12 76.6 177 32.2
Potri.019G002300 Populus trichocarpa HOM05D005305 ORTHO05D006394 3.8e-12 76.6 198 30.3
Dinv02718 Davidia involucrata HOM05D005305 ORTHO05D006394 4.9e-12 76.3 149 34.2
FvH4_2g02380 Fragaria vesca HOM05D005305 ORTHO05D006394 8.4e-12 75.5 169 34.3
Manes.12G149900 Manihot esculenta HOM05D005305 ORTHO05D006394 2.5e-11 73.9 174 35.1
ECA248G2956 Erigeron canadensis HOM05D005305 ORTHO05D006394 2.7e-10 70.5 118 37.3
FvH4_2g04910 Fragaria vesca HOM05D005305 ORTHO05D006394 7.9e-10 68.9 136 36.0
FAN20G0407 Fragaria x ananassa HOM05D005305 ORTHO05D006394 6.7e-09 65.9 128 35.2
FAN20G1442 Fragaria x ananassa HOM05D005305 ORTHO05D006394 6.7e-09 65.9 128 35.2
FAN20G2254 Fragaria x ananassa HOM05D005305 ORTHO05D006394 6.7e-09 65.9 128 35.2
FAN20G2361 Fragaria x ananassa HOM05D005305 ORTHO05D006394 6.7e-09 65.9 128 35.2
C02p49000 Brassica napus HOM05D005305 ORTHO05D006394 8.7e-09 65.5 89 38.2
FAN12G2268 Fragaria x ananassa HOM05D005305 ORTHO05D006394 1.5e-08 64.7 112 35.7
FvH4_4g36540 Fragaria vesca HOM05D005305 ORTHO05D006394 1.9e-08 64.3 112 35.7
FAN02G0608 Fragaria x ananassa HOM05D005305 ORTHO05D006394 2.5e-08 63.9 100 38.0
FAN02G4273 Fragaria x ananassa HOM05D005305 ORTHO05D006394 4.3e-08 63.2 100 35.0
TAR381G1643 Trochodendron aralioides HOM05D005305 ORTHO05D006394 2.8e-07 60.5 164 31.1
FAN02G3216 Fragaria x ananassa HOM05D005305 ORTHO05D006394 1.4e-06 58.2 166 32.5
FAN24G2323 Fragaria x ananassa HOM05D005305 ORTHO05D006394 1.4e-06 58.2 128 32.8
FAN05G3957 Fragaria x ananassa HOM05D005305 ORTHO05D006394 6.9e-06 55.8 100 37.0
FAN22G1821 Fragaria x ananassa HOM05D005305 ORTHO05D006394 6.9e-06 55.8 72 41.7


User provided reference genes

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