Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0337461 Helianthus annuus HOM05D011053 ORTHO05D010547 5.0e-232 807.4 397 100.0
HanXRQChr11g0327291 Helianthus annuus HOM05D011053 ORTHO05D010547 4.3e-74 282.7 376 39.6
HanXRQChr05g0159821 Helianthus annuus HOM05D011053 ORTHO05D010547 1.3e-62 244.6 404 37.4
HanXRQChr04g0115711 Helianthus annuus HOM05D011053 ORTHO05D010547 9.3e-53 211.8 331 38.4
HanXRQChr02g0048691 Helianthus annuus HOM05D011053 ORTHO05D010547 1.9e-42 177.6 442 30.1
HanXRQChr07g0197521 Helianthus annuus HOM05D011053 ORTHO05D010547 1.4e-29 134.8 442 27.8
HanXRQChr08g0225061 Helianthus annuus HOM05D011053 ORTHO05D010547 8.8e-27 125.6 432 27.8
HanXRQChr15g0489831 Helianthus annuus HOM05D008839 ORTHO05D010547 9.1e-24 115.5 441 25.9
Lsat_1_v5_gn_1_127421 Lactuca sativa HOM05D052696 ORTHO05D010547 1.5e-23 114.8 268 28.0
ECA238G0409 Erigeron canadensis HOM05D000096 ORTHO05D000045 3.8e-22 110.2 356 27.2
HanXRQChr02g0058501 Helianthus annuus HOM05D011053 ORTHO05D010547 2.1e-20 104.4 403 24.1
HanXRQChr02g0040311 Helianthus annuus HOM05D008839 ORTHO05D010547 3.6e-20 103.6 382 26.2
HanXRQChr16g0521991 Helianthus annuus HOM05D008839 ORTHO05D010547 3.6e-20 103.6 420 25.0
HanXRQChr12g0354851 Helianthus annuus HOM05D011053 ORTHO05D010547 2.8e-17 94.0 136 37.5
HanXRQChr04g0126351 Helianthus annuus HOM05D011053 ORTHO05D010547 8.2e-17 92.4 395 24.1
HanXRQChr08g0233401 Helianthus annuus HOM05D008839 ORTHO05D010547 1.4e-16 91.7 416 24.8
FvH4_6g08820 Fragaria vesca HOM05D007856 ORTHO05D003348 5.0e-14 83.2 406 23.4
ECA240G4800 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.5e-13 81.6 272 29.8
ECA238G2960 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.5e-13 80.9 255 26.7
ECA240G0326 Erigeron canadensis HOM05D008839 ORTHO05D010547 3.2e-13 80.5 310 25.2
FvH4_3g02850 Fragaria vesca HOM05D000096 ORTHO05D000045 3.2e-13 80.5 372 22.8
Lsat_1_v5_gn_3_27881 Lactuca sativa HOM05D008839 ORTHO05D010547 4.2e-13 80.1 351 23.9
FAN26G2587 Fragaria x ananassa HOM05D007856 ORTHO05D003348 9.4e-13 79.0 390 22.6
Lsat_1_v5_gn_5_161140 Lactuca sativa HOM05D008839 ORTHO05D010547 9.4e-13 79.0 346 23.1
RcHm_v2.0_Chr5g0010461 Rosa chinensis HOM05D006849 ORTHO05D003348 9.4e-13 79.0 468 21.2
HanXRQChr10g0285501 Helianthus annuus HOM05D011053 ORTHO05D010547 1.6e-12 78.2 140 28.6
HanXRQChr03g0088721 Helianthus annuus HOM05D008839 ORTHO05D010547 1.0e-11 75.5 219 32.0
HanXRQChr06g0172761 Helianthus annuus HOM05D011053 ORTHO05D010547 6.7e-11 72.8 142 33.8
ECA246G0696 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.0e-10 71.2 375 20.8
HanXRQChr16g0526441 Helianthus annuus HOM05D011053 ORTHO05D010547 2.0e-10 71.2 131 31.3
Lsat_1_v5_gn_3_80000 Lactuca sativa HOM05D052696 ORTHO05D010547 2.6e-10 70.9 205 27.3
ECA247G1268 Erigeron canadensis HOM05D000096 ORTHO05D002173 5.7e-10 69.7 362 23.2
Lsat_1_v5_gn_9_116400 Lactuca sativa HOM05D011053 ORTHO05D010547 5.7e-10 69.7 311 24.4
TWI14G1065 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 5.7e-10 69.7 348 21.6
MD04G1002000 Malus domestica HOM05D029265 ORTHO05D003348 1.3e-09 68.6 180 26.7
Lsat_1_v5_gn_9_57261 Lactuca sativa HOM05D008839 ORTHO05D010547 1.7e-09 68.2 278 23.4
TWI77G0313 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 2.2e-09 67.8 348 21.6
HanXRQChr09g0251611 Helianthus annuus HOM05D011053 ORTHO05D010547 1.1e-08 65.5 162 29.0
TWI56G0628 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 2.4e-08 64.3 323 22.9
RcHm_v2.0_Chr2g0133251 Rosa chinensis HOM05D006849 ORTHO05D003348 4.1e-08 63.5 158 27.2
TWI39G0063 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 1.2e-07 62.0 337 24.0
RcHm_v2.0_Chr2g0150581 Rosa chinensis HOM05D007856 ORTHO05D003348 2.0e-07 61.2 358 22.9
RcHm_v2.0_Chr2g0149141 Rosa chinensis HOM05D006849 ORTHO05D003348 2.6e-07 60.8 350 21.1
Os07g0190600 Oryza sativa ssp. japonica HOM05D008312 ORTHO05D007430 3.5e-07 60.5 146 27.4
Nitab4.5_0002986g0060 Nicotiana tabacum HOM05D002907 ORTHO05D005554 4.5e-07 60.1 185 27.6
DCAR_027158 Daucus carota HOM05D002907 ORTHO05D005554 5.9e-07 59.7 138 28.3
AL1G48730 Arabidopsis lyrata HOM05D000353 ORTHO05D031316 7.7e-07 59.3 287 23.7
DCAR_031560 Daucus carota HOM05D002907 ORTHO05D014614 1.3e-06 58.5 141 28.4
TWI53G0769 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 2.9e-06 57.4 357 21.8
DCAR_002774 Daucus carota HOM05D002907 ORTHO05D000065 3.8e-06 57.0 189 25.9
Lsat_1_v5_gn_9_118901 Lactuca sativa HOM05D008839 ORTHO05D010547 3.8e-06 57.0 389 20.6
Thecc.06G012500 Theobroma cacao HOM05D007876 ORTHO05D007430 3.8e-06 57.0 405 20.7
Hma1.2p1_0006F.1_g004680 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 6.5e-06 56.2 364 21.4
TWI31G1318 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 6.5e-06 56.2 377 21.2
TWI38G0982 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 6.5e-06 56.2 360 22.8
DCAR_031592 Daucus carota HOM05D002907 ORTHO05D000065 8.5e-06 55.8 137 27.7


User provided reference genes

Program Settings