Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0337271 Helianthus annuus HOM05D006843 ORTHO05D008517 9.9e-200 699.9 351 100.0
ECA236G1023 Erigeron canadensis HOM05D006843 ORTHO05D008517 1.1e-153 547.0 319 84.0
Lsat_1_v5_gn_7_109981 Lactuca sativa HOM05D006843 ORTHO05D008517 5.5e-142 508.1 305 81.6
Dinv22258 Davidia involucrata HOM05D006843 ORTHO05D008517 1.7e-122 443.4 340 66.5
Actinidia05093 Actinidia chinensis HOM05D006843 ORTHO05D008517 2.2e-122 443.0 350 63.1
CSS0043197 Camellia sinensis var. sinensis HOM05D006843 ORTHO05D008517 2.2e-122 443.0 351 64.7
Rhsim06G0217400 Rhododendron simsii HOM05D006843 ORTHO05D008517 7.1e-121 438.0 352 64.5
Gohir.D01G067100 Gossypium hirsutum HOM05D006843 ORTHO05D008517 5.6e-118 428.3 351 63.0
Gohir.A01G079900 Gossypium hirsutum HOM05D006843 ORTHO05D008517 1.1e-116 424.1 351 62.7
Manes.03G129700 Manihot esculenta HOM05D006843 ORTHO05D008517 6.8e-116 421.4 351 61.8
Duzib268G1400 Durio zibethinus HOM05D006843 ORTHO05D008517 1.5e-115 420.2 351 63.2
Nitab4.5_0003495g0070 Nicotiana tabacum HOM05D006843 ORTHO05D008517 2.0e-115 419.9 350 61.4
Gorai.002G089000 Gossypium raimondii HOM05D006843 ORTHO05D008517 4.4e-115 418.7 351 62.1
Hma1.2p1_0673F.1_g201400 Hydrangea macrophylla HOM05D006843 ORTHO05D008517 4.4e-115 418.7 307 67.8
Thecc.07G035800 Theobroma cacao HOM05D006843 ORTHO05D008517 4.4e-115 418.7 351 62.4
GSVIVG01037656001 Vitis vinifera HOM05D006843 ORTHO05D008517 1.3e-114 417.2 350 62.3
Glyma.14G022900 Glycine max HOM05D006843 ORTHO05D008517 2.9e-114 416.0 352 59.9
Cc05_g13830 Coffea canephora HOM05D006843 ORTHO05D008517 1.4e-113 413.7 351 60.1
CiPaw.11G190100 Carya illinoinensis HOM05D006843 ORTHO05D008517 5.4e-113 411.8 351 59.5
Nn1g03519 Nelumbo nucifera HOM05D006843 ORTHO05D008517 5.4e-113 411.8 333 64.3
TAR624G1415 Trochodendron aralioides HOM05D006843 ORTHO05D008517 7.1e-113 411.4 351 62.7
Glyma.02G291800 Glycine max HOM05D006843 ORTHO05D008517 1.2e-112 410.6 352 59.9
Ca_06326_v3 Cicer arietinum L. HOM05D006843 ORTHO05D008517 2.7e-112 409.5 352 59.7
arahy.Tifrunner.gnm1.ann1.J1CT6Y Arachis hypogaea HOM05D006843 ORTHO05D008517 2.3e-111 406.4 351 59.8
Haze_09681 Corylus avellana HOM05D006843 ORTHO05D008517 2.3e-111 406.4 350 60.9
Cfa020337 Carpinus fangiana HOM05D006843 ORTHO05D008517 3.0e-111 406.0 350 60.9
arahy.Tifrunner.gnm1.ann1.Q92UKX Arachis hypogaea HOM05D006843 ORTHO05D008517 5.1e-111 405.2 351 59.8
PGSC0003DMG402022316 Solanum tuberosum HOM05D006843 ORTHO05D008517 5.1e-111 405.2 315 63.2
QL08p010009 Quercus lobata HOM05D006843 ORTHO05D008517 1.1e-110 404.1 352 60.2
Medtr5g092970 Medicago truncatula HOM05D006843 ORTHO05D008517 2.5e-110 402.9 350 58.9
Peaxi162Scf00235g00218 Petunia axillaris HOM05D006843 ORTHO05D008517 3.3e-110 402.5 328 61.3
Prupe.4G214500 Prunus persica HOM05D006843 ORTHO05D008517 5.6e-110 401.7 353 59.5
Phvul.008G268300 Phaseolus vulgaris HOM05D006843 ORTHO05D008517 1.2e-109 400.6 353 58.9
AT4G26980 Arabidopsis thaliana HOM05D006843 ORTHO05D008517 1.6e-109 400.2 342 62.0
Sc03g0008560 Simmondsia chinensis HOM05D006843 ORTHO05D008517 2.1e-109 399.8 347 61.4
Solyc07g064630.4 Solanum lycopersicum HOM05D006843 ORTHO05D008517 2.1e-109 399.8 303 64.4
arahy.Tifrunner.gnm1.ann1.0IA02T Arachis hypogaea HOM05D006843 ORTHO05D008517 2.8e-109 399.4 351 60.1
arahy.Tifrunner.gnm1.ann1.57CCTN Arachis hypogaea HOM05D006843 ORTHO05D008517 2.8e-109 399.4 351 60.1
arahy.Tifrunner.gnm1.ann1.BV1YAY Arachis hypogaea HOM05D006843 ORTHO05D008517 2.8e-109 399.4 351 60.1
arahy.Tifrunner.gnm1.ann1.H57FKH Arachis hypogaea HOM05D006843 ORTHO05D008517 2.8e-109 399.4 351 60.1
LjContig00272g0007634 Lotus japonicus HOM05D006843 ORTHO05D008517 1.1e-108 397.5 354 59.9
Carub.0007s1386 Capsella rubella HOM05D006843 ORTHO05D008517 1.4e-108 397.1 342 60.8
ClCG09G010830 Citrullus lanatus HOM05D006843 ORTHO05D008517 1.4e-108 397.1 365 57.3
AL7G25850 Arabidopsis lyrata HOM05D006843 ORTHO05D008517 4.0e-108 395.6 342 60.8
Psat2g011720 Pisum sativum HOM05D006843 ORTHO05D008517 6.8e-108 394.8 344 59.3
PGR083G2310 Punica granatum HOM05D006843 ORTHO05D008517 1.5e-107 393.7 353 58.4
CANSAT11G0475 Cannabis sativa HOM05D006843 ORTHO05D008517 2.6e-107 392.9 350 59.4
CsaV3_7G021850 Cucumis sativus L. HOM05D006843 ORTHO05D008517 7.6e-107 391.3 305 62.6
Nitab4.5_0007360g0010 Nicotiana tabacum HOM05D006843 ORTHO05D008517 7.6e-107 391.3 297 64.3
Sopen07g032830 Solanum pennellii HOM05D006843 ORTHO05D008517 7.6e-107 391.3 310 62.9
VMungo0647G1675 Vigna mungo HOM05D006843 ORTHO05D008517 7.6e-107 391.3 353 58.1
Lalb_Chr04g0248381 Lupinus albus HOM05D006843 ORTHO05D008517 1.7e-106 390.2 352 58.5
MBI18_g14135_MAGBIO Magnolia biondii HOM05D006843 ORTHO05D008517 1.7e-106 390.2 355 58.6
CiPaw.12G130200 Carya illinoinensis HOM05D006843 ORTHO05D008517 2.9e-106 389.4 352 57.4
MELO3C013160.2 Cucumis melo HOM05D006843 ORTHO05D008517 2.9e-106 389.4 356 57.3
Cpa.g.sc12.302 Carica papaya HOM05D006843 ORTHO05D008517 3.8e-106 389.0 350 60.3
Thhalv10025611m.g Eutrema salsugineum HOM05D006843 ORTHO05D008517 6.4e-106 388.3 339 61.4
TPR.G1211 Trifolium pratense HOM05D006843 ORTHO05D008517 1.4e-105 387.1 351 57.8
TWI39G1240 Tripterygium wilfordii HOM05D006843 ORTHO05D008517 4.2e-105 385.6 344 57.0
CARHR234590 Cardamine hirsuta HOM05D006843 ORTHO05D008517 7.8e-104 381.3 349 58.5
Potri.011G090700 Populus trichocarpa HOM05D006843 ORTHO05D008517 7.8e-104 381.3 356 57.0
MSTRG.6924 Avicennia marina HOM05D006843 ORTHO05D008517 1.3e-103 380.6 351 55.6
MD11G1217200 Malus domestica HOM05D006843 ORTHO05D008517 2.3e-103 379.8 353 56.9
Aa31LG5G10440 Aethionema arabicum HOM05D006843 ORTHO05D008517 3.0e-103 379.4 347 58.2
A03p56990 Brassica napus HOM05D006843 ORTHO05D008517 3.0e-103 379.4 340 59.4
Ciclev10008752m.g Citrus clementina HOM05D006843 ORTHO05D008517 3.0e-103 379.4 336 59.8
C07p55080 Brassica napus HOM05D006843 ORTHO05D008517 5.1e-103 378.6 339 59.9
THA.LOC104809268 Tarenaya hassleriana HOM05D006843 ORTHO05D008517 1.1e-102 377.5 348 55.5
Sabra11G0086300 Salix brachista HOM05D006843 ORTHO05D008517 4.3e-102 375.6 354 56.8
BcaC06g32719 Brassica carinata HOM05D006843 ORTHO05D008517 7.3e-102 374.8 341 57.8
Eucgr.F00758 Eucalyptus grandis HOM05D006843 ORTHO05D008517 7.3e-102 374.8 357 54.9
Lj8A169G88 Lonicera japonica HOM05D006843 ORTHO05D008517 5.3e-100 368.6 300 64.3
DCAR_012722 Daucus carota HOM05D006843 ORTHO05D008517 3.4e-99 365.9 344 57.0
RcHm_v2.0_Chr5g0040061 Rosa chinensis HOM05D006843 ORTHO05D008517 1.3e-98 364.0 354 56.5
Hma1.2p1_0673F.1_g201390 Hydrangea macrophylla HOM05D006843 ORTHO05D008517 1.7e-98 363.6 309 60.8
Migut.M01756 Erythranthe guttata HOM05D006843 ORTHO05D008517 2.9e-98 362.8 355 55.5
Aqoxy4G01855 Aquilegia oxysepala HOM05D006843 ORTHO05D008517 1.4e-97 360.5 354 54.5
SGA_v2.0_scaffold165G38275 Striga asiatica HOM05D006843 ORTHO05D008517 4.2e-97 359.0 370 51.9
AUR62015782 Chenopodium quinoa HOM05D006843 ORTHO05D008517 5.4e-97 358.6 304 59.2
Ah.04g165900 Amaranthus hybridus HOM05D006843 ORTHO05D008517 3.5e-96 355.9 352 54.5
Sed0013659 Sechium edule HOM05D006843 ORTHO05D008517 3.5e-96 355.9 331 54.4
CAN.G337.136 Capsicum annuum HOM05D006843 ORTHO05D008517 5.1e-95 352.1 265 64.9
FvH4_3g22820 Fragaria vesca HOM05D006843 ORTHO05D008517 9.0e-92 341.3 353 53.8
HPP92_013325 Vanilla planifolia HOM05D006843 ORTHO05D008517 1.2e-91 340.9 332 53.3
EL10Ac4g07802 Beta vulgaris HOM05D006843 ORTHO05D008517 1.5e-91 340.5 403 48.4
FAN16G2069 Fragaria x ananassa HOM05D006843 ORTHO05D008517 2.0e-91 340.1 353 53.8
FAN25G2076 Fragaria x ananassa HOM05D006843 ORTHO05D008517 1.3e-90 337.4 304 58.6
BolC7t46005H Brassica oleracea HOM05D006843 ORTHO05D008517 1.7e-90 337.0 267 64.0
BraA03t14769Z Brassica rapa HOM05D006843 ORTHO05D008517 1.8e-87 327.0 267 63.3
Zm00001eb224560 Zea mays HOM05D006843 ORTHO05D008517 7.4e-86 321.6 278 57.6
PSO063G3629 Papaver somniferum HOM05D006843 ORTHO05D008517 5.8e-83 312.0 299 55.9
unitig_8.g4621 Utricularia gibba HOM05D006843 ORTHO05D008517 3.8e-82 309.3 370 47.0
Zm00001eb273720 Zea mays HOM05D006843 ORTHO05D008517 3.8e-82 309.3 271 59.8
PSO170G2271 Papaver somniferum HOM05D006843 ORTHO05D008517 4.6e-80 302.4 341 50.1
Mapoly0001s0246 Marchantia polymorpha HOM05D006843 ORTHO05D008517 2.2e-74 283.5 309 48.5
Pp3c9_17980 Physcomitrium patens HOM05D006843 ORTHO05D008517 4.2e-73 279.3 304 50.0
AUR62020435 Chenopodium quinoa HOM05D006843 ORTHO05D008517 8.7e-71 271.6 404 41.1
Thhalv10026846m.g Eutrema salsugineum HOM05D006843 ORTHO05D008517 2.4e-60 236.9 266 51.5
CBR_g34195 Chara braunii HOM05D006843 ORTHO05D008517 4.2e-57 226.1 361 37.7
SMO234G0011 Selaginella moellendorffii HOM05D006843 ORTHO05D008517 4.4e-54 216.1 258 43.8
Hund02000 Selenicereus undatus HOM05D006843 ORTHO05D008517 5.5e-49 199.1 216 51.9
ATR0490G005 Amborella trichopoda HOM05D006843 ORTHO05D008517 1.2e-48 198.0 183 55.2
Atru.chr2.3418 Acer truncatum HOM05D006843 ORTHO05D008517 3.3e-46 189.9 133 69.2
Psat5g064560 Pisum sativum HOM05D006843 ORTHO05D008517 8.5e-42 175.3 159 54.7
Psat4g156200 Pisum sativum HOM05D006843 ORTHO05D008517 1.5e-41 174.5 159 54.7
Psat7g029280 Pisum sativum HOM05D006843 ORTHO05D008517 1.2e-40 171.4 128 60.9
vmacro11722 Vaccinium macrocarpon HOM05D006843 ORTHO05D008517 1.2e-38 164.9 195 48.7
Haze_01866 Corylus avellana HOM05D006843 ORTHO05D008517 2.7e-35 153.7 182 50.0
Dinv20052 Davidia involucrata HOM05D002890 ORTHO05D005855 5.0e-34 149.4 121 62.0
Os06g0679700 Oryza sativa ssp. japonica HOM05D006843 ORTHO05D008517 8.5e-34 148.7 168 51.8
CDE02G2447 Ceratophyllum demersum HOM05D006843 ORTHO05D008517 1.8e-28 131.0 250 35.6
Psat3g185160 Pisum sativum HOM05D006843 ORTHO05D008517 1.0e-23 115.2 87 63.2
Psat3g153160 Pisum sativum HOM05D006816 ORTHO05D008517 8.9e-23 112.1 89 61.8
MCO05G180 Micromonas commoda HOM05D006843 ORTHO05D008517 1.3e-18 98.2 198 30.8
Psat7g126680 Pisum sativum HOM05D006843 ORTHO05D008517 7.0e-12 75.9 62 56.5
Dinv20053 Davidia involucrata HOM05D006843 ORTHO05D008517 2.5e-09 67.4 120 36.7
ATR0926G001 Amborella trichopoda HOM05D006843 ORTHO05D008517 1.6e-08 64.7 56 57.1
Cre01.g054650 Chlamydomonas reinhardtii HOM05D006843 ORTHO05D008517 1.5e-06 58.2 99 32.3


User provided reference genes

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