Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0337121 Helianthus annuus HOM05D003963 ORTHO05D004558 3.5e-208 728.8 609 100.0
ECA236G3037 Erigeron canadensis HOM05D003963 ORTHO05D004558 2.8e-133 479.9 633 80.6
Lsat_1_v5_gn_7_80140 Lactuca sativa HOM05D003963 ORTHO05D004558 5.7e-126 455.7 612 82.7
Dinv19323 Davidia involucrata HOM05D003963 ORTHO05D004558 1.8e-84 317.8 667 68.7
Hma1.2p1_0217F.1_g091740 Hydrangea macrophylla HOM05D003963 ORTHO05D004558 2.1e-80 304.3 633 70.3
Peaxi162Scf00001g00041 Petunia axillaris HOM05D003963 ORTHO05D004558 2.6e-78 297.4 646 68.1
Peaxi162Scf00001g00043 Petunia axillaris HOM05D003963 ORTHO05D004558 2.6e-78 297.4 646 68.1
COL.COLO4_20869 Corchorus olitorius HOM05D003963 ORTHO05D004558 6.4e-77 292.7 660 67.7
CANSAT11G0470 Cannabis sativa HOM05D003963 ORTHO05D004558 1.4e-76 291.6 635 68.7
Dinv24217 Davidia involucrata HOM05D003963 ORTHO05D004558 1.8e-76 291.2 640 68.9
Actinidia00250 Actinidia chinensis HOM05D003963 ORTHO05D004558 5.4e-76 289.7 590 70.3
Thecc.02G143400 Theobroma cacao HOM05D003963 ORTHO05D004558 1.2e-75 288.5 656 67.2
Sed0018276 Sechium edule HOM05D003963 ORTHO05D004558 7.8e-75 285.8 644 67.2
Cpa.g.sc0.13 Carica papaya HOM05D003963 ORTHO05D004558 1.0e-74 285.4 658 67.3
Cc02_g21840 Coffea canephora HOM05D003963 ORTHO05D004558 1.0e-74 285.4 629 68.4
Peaxi162Scf00003g00367 Petunia axillaris HOM05D003963 ORTHO05D004558 1.3e-74 285.0 643 67.8
Cfa005579 Carpinus fangiana HOM05D003963 ORTHO05D004558 1.7e-74 284.6 649 68.6
CSS0022227 Camellia sinensis var. sinensis HOM05D003963 ORTHO05D004558 3.9e-74 283.5 651 67.3
Potri.003G023300 Populus trichocarpa HOM05D003963 ORTHO05D004558 3.9e-74 283.5 639 68.9
Nitab4.5_0002865g0100 Nicotiana tabacum HOM05D003963 ORTHO05D004558 5.0e-74 283.1 634 69.2
Nitab4.5_0003748g0020 Nicotiana tabacum HOM05D003963 ORTHO05D004558 8.6e-74 282.3 633 68.9
CSS0000527 Camellia sinensis var. sinensis HOM05D003963 ORTHO05D004558 1.1e-73 282.0 651 67.3
Duzib052G0219 Durio zibethinus HOM05D003963 ORTHO05D004558 1.5e-73 281.6 656 66.9
Potri.001G206600 Populus trichocarpa HOM05D003963 ORTHO05D004558 3.3e-73 280.4 654 66.2
ClCG06G009720 Citrullus lanatus HOM05D003963 ORTHO05D004558 5.6e-73 279.6 644 67.7
Prupe.1G559700 Prunus persica HOM05D003963 ORTHO05D004558 9.5e-73 278.9 659 67.1
vmacro01810 Vaccinium macrocarpon HOM05D003963 ORTHO05D004558 2.8e-72 277.3 645 67.4
MELO3C020350.2 Cucumis melo HOM05D003963 ORTHO05D004558 3.6e-72 276.9 644 67.2
Eucgr.I02691 Eucalyptus grandis HOM05D003963 ORTHO05D004558 3.6e-72 276.9 653 67.7
Manes.04G062400 Manihot esculenta HOM05D003963 ORTHO05D004558 4.7e-72 276.6 659 66.2
CsaV3_2G011200 Cucumis sativus L. HOM05D003963 ORTHO05D004558 8.0e-72 275.8 653 66.8
Oeu037198.2 Olea europaea HOM05D003963 ORTHO05D004558 8.0e-72 275.8 650 66.2
QL11p019412 Quercus lobata HOM05D003963 ORTHO05D004558 4.0e-71 273.5 649 66.6
Haze_10775 Corylus avellana HOM05D003963 ORTHO05D004558 5.2e-71 273.1 654 67.0
TWI23G1041 Tripterygium wilfordii HOM05D003963 ORTHO05D004558 5.2e-71 273.1 653 66.5
AUR62031300 Chenopodium quinoa HOM05D003963 ORTHO05D004558 6.8e-71 272.7 652 66.0
Haze_09992 Corylus avellana HOM05D003963 ORTHO05D004558 8.9e-71 272.3 660 66.2
AUR62027385 Chenopodium quinoa HOM05D003963 ORTHO05D004558 2.6e-70 270.8 649 65.8
Sabra03G0014600 Salix brachista HOM05D003963 ORTHO05D004558 2.6e-70 270.8 630 68.7
FvH4_5g30651 Fragaria vesca HOM05D003963 ORTHO05D004558 5.8e-70 269.6 653 67.7
Actinidia28070 Actinidia chinensis HOM05D003963 ORTHO05D004558 7.5e-70 269.2 656 65.2
Rhsim11G0134700 Rhododendron simsii HOM05D003963 ORTHO05D004558 7.5e-70 269.2 644 66.8
Migut.B00637 Erythranthe guttata HOM05D003963 ORTHO05D004558 1.7e-69 268.1 614 68.7
RcHm_v2.0_Chr7g0225521 Rosa chinensis HOM05D003963 ORTHO05D004558 3.7e-69 266.9 653 67.1
FAN04G2665 Fragaria x ananassa HOM05D003963 ORTHO05D004558 1.9e-68 264.6 653 67.2
CiPaw.05G038900 Carya illinoinensis HOM05D003963 ORTHO05D004558 1.2e-67 261.9 656 65.4
MSTRG.16566 Avicennia marina HOM05D003963 ORTHO05D004558 6.0e-67 259.6 645 65.9
Hma1.2p1_0557F.1_g178060 Hydrangea macrophylla HOM05D003963 ORTHO05D004558 7.8e-67 259.2 626 67.9
Duzib248G1667 Durio zibethinus HOM05D003963 ORTHO05D004558 1.0e-66 258.8 657 66.4
Ah.09g232110 Amaranthus hybridus HOM05D003963 ORTHO05D004558 1.3e-66 258.5 635 66.3
MD15G1414300 Malus domestica HOM05D003963 ORTHO05D004558 1.3e-66 258.5 658 66.3
Gohir.D02G195000 Gossypium hirsutum HOM05D003963 ORTHO05D004558 2.3e-66 257.7 656 65.7
Gorai.005G217900 Gossypium raimondii HOM05D003963 ORTHO05D004558 2.3e-66 257.7 656 65.7
MD08G1221900 Malus domestica HOM05D003963 ORTHO05D004558 5.0e-66 256.5 655 66.0
TWI59G0617 Tripterygium wilfordii HOM05D003963 ORTHO05D004558 6.6e-66 256.1 649 65.6
Ciclev10000572m.g Citrus clementina HOM05D003963 ORTHO05D004558 1.5e-65 255.0 622 67.2
Gorai.013G063300 Gossypium raimondii HOM05D003963 ORTHO05D004558 1.5e-65 255.0 648 66.2
CAN.G523.95 Capsicum annuum HOM05D003963 ORTHO05D004558 3.3e-65 253.8 629 67.6
SalBow6G3757 Salvia bowleyana HOM05D003963 ORTHO05D004558 4.3e-65 253.4 614 67.4
SalBow6G4534 Salvia bowleyana HOM05D003963 ORTHO05D004558 4.3e-65 253.4 614 67.4
Sopen01g047420 Solanum pennellii HOM05D003963 ORTHO05D004558 7.3e-65 252.7 627 67.8
Ca_18336_v3 Cicer arietinum L. HOM05D003963 ORTHO05D004558 1.2e-64 251.9 646 65.8
Solyc01g104910.3 Solanum lycopersicum HOM05D003963 ORTHO05D004558 1.2e-64 251.9 627 67.5
DCAR_029216 Daucus carota HOM05D003963 ORTHO05D004558 4.7e-64 250.0 665 65.1
PGSC0003DMG400029740 Solanum tuberosum HOM05D003963 ORTHO05D004558 6.2e-64 249.6 627 67.5
Glyma.08G074900 Glycine max HOM05D003963 ORTHO05D004558 8.1e-64 249.2 627 66.5
CiPaw.06G151200 Carya illinoinensis HOM05D003963 ORTHO05D004558 1.4e-63 248.4 632 65.7
SalBow5G2159 Salvia bowleyana HOM05D003963 ORTHO05D004558 1.8e-63 248.1 632 67.1
EL10Ac8g19340 Beta vulgaris HOM05D003963 ORTHO05D004558 1.5e-62 245.0 650 64.6
Ah.14g085400 Amaranthus hybridus HOM05D003963 ORTHO05D004558 3.4e-62 243.8 644 65.5
Gohir.D13G056000 Gossypium hirsutum HOM05D003963 ORTHO05D004558 4.4e-62 243.4 648 65.1
Sc14g0002710 Simmondsia chinensis HOM05D003963 ORTHO05D004558 1.3e-61 241.9 647 65.2
Lj4g0008212 Lotus japonicus HOM05D003963 ORTHO05D004558 1.7e-61 241.5 653 64.5
Gohir.A13G065700 Gossypium hirsutum HOM05D003963 ORTHO05D004558 1.1e-60 238.8 655 64.7
Psat7g097440 Pisum sativum HOM05D003963 ORTHO05D004558 3.2e-60 237.3 647 64.6
Gohir.A03G171700 Gossypium hirsutum HOM05D003963 ORTHO05D004558 7.1e-60 236.1 587 69.3
Glyma.05G120100 Glycine max HOM05D003963 ORTHO05D004558 4.6e-59 233.4 621 66.2
VMungo0251G0315 Vigna mungo HOM05D003963 ORTHO05D004558 7.8e-59 232.6 648 64.8
TAR381G1468 Trochodendron aralioides HOM05D003963 ORTHO05D004558 1.0e-58 232.3 653 63.9
FAN13G1550 Fragaria x ananassa HOM05D003963 ORTHO05D004558 1.7e-58 231.5 651 65.6
Medtr4g094290 Medicago truncatula HOM05D003963 ORTHO05D004558 5.1e-58 229.9 647 64.0
Sabra03G0014700 Salix brachista HOM05D003963 ORTHO05D004558 2.5e-57 227.6 616 65.7
Actinidia38971 Actinidia chinensis HOM05D003963 ORTHO05D004558 9.5e-57 225.7 613 66.6
Nn5g28887 Nelumbo nucifera HOM05D003963 ORTHO05D004558 1.6e-56 224.9 654 53.2
Phvul.002G206700 Phaseolus vulgaris HOM05D003963 ORTHO05D004558 3.6e-56 223.8 594 67.8
Oeu000233.2 Olea europaea HOM05D003963 ORTHO05D004558 4.0e-55 220.3 640 65.0
Aqoxy6G00464 Aquilegia oxysepala HOM05D003963 ORTHO05D004558 2.2e-53 214.5 636 62.9
Nn1g05173 Nelumbo nucifera HOM05D003963 ORTHO05D004558 9.2e-52 209.1 658 58.7
THA.LOC104799580 Tarenaya hassleriana HOM05D003963 ORTHO05D004558 1.7e-50 204.9 659 61.2
Lalb_Chr12g0208491 Lupinus albus HOM05D003963 ORTHO05D004558 3.0e-50 204.1 628 64.0
Lj9P318T69 Lonicera japonica HOM05D003963 ORTHO05D004558 1.6e-48 198.4 443 82.4
Lj5C243T4 Lonicera japonica HOM05D003963 ORTHO05D004558 8.1e-48 196.1 594 66.5
Lalb_Chr13g0291591 Lupinus albus HOM05D003963 ORTHO05D004558 8.1e-48 196.1 636 62.4
Hund06704 Selenicereus undatus HOM05D003963 ORTHO05D004558 6.9e-47 193.0 585 66.3
ECA234G1426 Erigeron canadensis HOM05D003963 ORTHO05D004558 1.2e-46 192.2 638 61.9
MBI05_g46461_MAGBIO Magnolia biondii HOM05D003963 ORTHO05D004558 1.1e-44 185.7 633 63.0
Aa31LG3G17400 Aethionema arabicum HOM05D003963 ORTHO05D004558 9.3e-44 182.6 645 61.1
Lsat_1_v5_gn_5_106681 Lactuca sativa HOM05D003963 ORTHO05D004558 6.6e-42 176.4 630 51.4
CARHR278520 Cardamine hirsuta HOM05D003963 ORTHO05D004558 8.7e-42 176.0 626 61.0
GSVIVG01038733001 Vitis vinifera HOM05D003963 ORTHO05D004558 8.7e-42 176.0 614 43.5
Atru.chr10.2100 Acer truncatum HOM05D003963 ORTHO05D004558 3.3e-41 174.1 235 72.8
PSO541G3622 Papaver somniferum HOM05D003963 ORTHO05D004558 9.6e-41 172.6 625 61.1
Aa31sc1834G20 Aethionema arabicum HOM05D003963 ORTHO05D004558 1.6e-40 171.8 633 61.1
Lalb_Chr07g0189461 Lupinus albus HOM05D003963 ORTHO05D004558 2.8e-40 171.0 611 62.5
Sp2g27620 Schrenkiella parvula HOM05D003963 ORTHO05D004558 8.1e-40 169.5 640 62.2
BraA06t26067Z Brassica rapa HOM05D003963 ORTHO05D004558 1.2e-38 165.6 615 62.8
Carub.0008s2535 Capsella rubella HOM05D003963 ORTHO05D004558 2.6e-38 164.5 645 60.0
AL8G41940 Arabidopsis lyrata HOM05D003963 ORTHO05D004558 3.4e-38 164.1 648 60.0
Aa31LG1G17380 Aethionema arabicum HOM05D003963 ORTHO05D004558 3.8e-37 160.6 632 61.9
AT5G64550 Arabidopsis thaliana HOM05D003963 ORTHO05D004558 4.9e-37 160.2 650 60.3
BcaC03g18430 Brassica carinata HOM05D003963 ORTHO05D004558 8.4e-37 159.5 641 60.8
Thhalv10003819m.g Eutrema salsugineum HOM05D003963 ORTHO05D004558 4.2e-36 157.1 639 60.6
C02p63440 Brassica napus HOM05D003963 ORTHO05D004558 5.4e-36 156.8 605 63.3
BolC2t12411H Brassica oleracea HOM05D003963 ORTHO05D004558 5.4e-36 156.8 605 63.3
Oeu037196.1 Olea europaea HOM05D003963 ORTHO05D004558 9.3e-36 156.0 259 41.7
PSO675G1096 Papaver somniferum HOM05D003963 ORTHO05D004558 9.3e-36 156.0 624 59.9
Peaxi162Scf00152g01123 Petunia axillaris HOM05D003963 ORTHO05D004558 9.3e-36 156.0 654 55.4
TPR.G10467 Trifolium pratense HOM05D003963 ORTHO05D004558 1.6e-35 155.2 649 54.2
Zm00001eb244890 Zea mays HOM05D003963 ORTHO05D004558 4.6e-35 153.7 579 65.1
BolC3t18432H Brassica oleracea HOM05D003963 ORTHO05D004558 6.0e-35 153.3 618 61.8
A06p31280 Brassica napus HOM05D003963 ORTHO05D004558 7.9e-35 152.9 615 62.4
C03p61710 Brassica napus HOM05D003963 ORTHO05D004558 7.9e-35 152.9 619 61.7
Atru.chr6.908 Acer truncatum HOM05D003963 ORTHO05D004558 1.0e-34 152.5 237 43.0
BraA02t09261Z Brassica rapa HOM05D003963 ORTHO05D004558 1.5e-33 148.7 602 61.6
A02p43350 Brassica napus HOM05D003963 ORTHO05D004558 1.9e-33 148.3 602 61.8
Zm00001eb182980 Zea mays HOM05D003963 ORTHO05D004558 4.3e-33 147.1 629 60.3
ATR0564G216 Amborella trichopoda HOM05D003963 ORTHO05D004558 3.7e-32 144.1 570 63.5
BcaB07g29747 Brassica carinata HOM05D003963 ORTHO05D004558 4.0e-31 140.6 602 62.6
Atru.chr10.2101 Acer truncatum HOM05D003963 ORTHO05D004558 3.5e-27 127.5 224 40.2
unitig_62.g23623 Utricularia gibba HOM05D003963 ORTHO05D004558 3.9e-26 124.0 208 41.3
Rhsim11G0135400 Rhododendron simsii HOM05D003963 ORTHO05D004558 3.3e-25 120.9 259 41.3
Os04g0458200 Oryza sativa ssp. japonica HOM05D003963 ORTHO05D004558 9.6e-25 119.4 588 61.9
CARHR203720 Cardamine hirsuta HOM05D003963 ORTHO05D004558 4.0e-23 114.0 604 58.6
Zm00001eb080920 Zea mays HOM05D003963 ORTHO05D004558 9.0e-23 112.8 647 58.0
Sp6g33710 Schrenkiella parvula HOM05D003963 ORTHO05D004558 1.2e-22 112.5 620 58.5
AL6G20100 Arabidopsis lyrata HOM05D003963 ORTHO05D004558 1.5e-22 112.1 231 39.0
AT5G09670 Arabidopsis thaliana HOM05D003963 ORTHO05D004558 2.0e-22 111.7 200 40.0
Thhalv10013049m.g Eutrema salsugineum HOM05D003963 ORTHO05D004558 2.0e-22 111.7 641 57.6
Os02g0575700 Oryza sativa ssp. japonica HOM05D003963 ORTHO05D004558 2.0e-22 111.7 652 55.5
HanXRQChr10g0293231 Helianthus annuus HOM05D003963 ORTHO05D004558 3.4e-22 110.9 246 37.8
A02p00100 Brassica napus HOM05D003963 ORTHO05D004558 2.2e-21 108.2 560 60.5
Haze_09989 Corylus avellana HOM05D003963 ORTHO05D004558 2.2e-21 108.2 472 53.0
SGA_v2.0_scaffold45G17289 Striga asiatica HOM05D003963 ORTHO05D004558 2.2e-21 108.2 204 42.2
Zm00001eb423980 Zea mays HOM05D003963 ORTHO05D004558 4.9e-21 107.1 585 61.5
BraA09t36518Z Brassica rapa HOM05D003963 ORTHO05D004558 1.1e-20 105.9 606 59.4
Hma1.2p1_0217F.1_g091700 Hydrangea macrophylla HOM05D003963 ORTHO05D004558 1.9e-20 105.1 110 61.8
A09p08700 Brassica napus HOM05D003963 ORTHO05D004558 7.1e-20 103.2 606 59.2
Os04g0640900 Oryza sativa ssp. japonica HOM05D003963 ORTHO05D004558 2.7e-19 101.3 238 36.1
Zm00001eb068980 Zea mays HOM05D003963 ORTHO05D004558 3.3e-17 94.4 207 39.6
BcaB05g21539 Brassica carinata HOM05D003963 ORTHO05D004558 4.3e-17 94.0 166 44.0
HPP92_027148 Vanilla planifolia HOM05D003963 ORTHO05D004558 4.3e-17 94.0 200 39.5
Hma1.2p1_0217F.1_g091720 Hydrangea macrophylla HOM05D003963 ORTHO05D004558 7.4e-17 93.2 154 42.9
Zm00001eb347870 Zea mays HOM05D003963 ORTHO05D010684 4.8e-16 90.5 208 40.4
CDE02G0069 Ceratophyllum demersum HOM05D003963 ORTHO05D004558 8.2e-16 89.7 613 48.1
Hma1.2p1_0217F.1_g091695 Hydrangea macrophylla HOM05D003963 ORTHO05D004558 6.9e-15 86.7 98 60.2
Hma1.2p1_0217F.1_g091710 Hydrangea macrophylla HOM05D003963 ORTHO05D004558 1.5e-14 85.5 98 60.2
CDE05G1767 Ceratophyllum demersum HOM05D003963 ORTHO05D004558 5.9e-14 83.6 131 45.0
BraA02t04995Z Brassica rapa HOM05D003963 ORTHO05D004558 1.7e-13 82.0 163 41.1
BcaC03g13269 Brassica carinata HOM05D003963 ORTHO05D004558 3.8e-13 80.9 161 39.1
BolC2t06362H Brassica oleracea HOM05D006324 ORTHO05D007463 3.8e-13 80.9 161 39.1
BcaB04g19973 Brassica carinata HOM05D003963 ORTHO05D004558 8.5e-13 79.7 149 43.6
Hma1.2p1_0217F.1_g091680 Hydrangea macrophylla HOM05D003963 ORTHO05D004558 1.4e-12 79.0 77 61.0
HPP92_016461 Vanilla planifolia HOM05D003963 ORTHO05D004558 1.9e-12 78.6 178 38.2
SEGI_28658 Sequoiadendron giganteum HOM05D003548 ORTHO05D004066 3.9e-10 70.9 196 32.7
Haze_09990 Corylus avellana HOM05D003963 ORTHO05D004558 1.5e-09 68.9 405 60.2
BolC9t53891H Brassica oleracea HOM05D003963 ORTHO05D004558 9.7e-09 66.2 214 32.2
BcaC04g23312 Brassica carinata HOM05D003963 ORTHO05D004558 1.3e-08 65.9 162 35.2
C09p09830 Brassica napus HOM05D003963 ORTHO05D004558 1.3e-08 65.9 162 35.2
Lsat_1_v5_gn_9_57161 Lactuca sativa HOM05D003548 ORTHO05D004066 4.8e-08 63.9 141 34.8
SMO115G0264 Selaginella moellendorffii HOM05D003963 ORTHO05D004558 2.4e-07 61.6 164 33.5
Oeu050927.1 Olea europaea HOM05D003548 ORTHO05D004066 3.1e-07 61.2 166 34.3
Oeu050928.1 Olea europaea HOM05D003548 ORTHO05D004066 3.1e-07 61.2 166 34.3
SEGI_29670 Sequoiadendron giganteum HOM05D003963 ORTHO05D004558 3.1e-07 61.2 57 47.4
unitig_46.g18812 Utricularia gibba HOM05D003548 ORTHO05D004066 3.1e-07 61.2 135 34.8
Haze_27105 Corylus avellana HOM05D003963 ORTHO05D004558 4.1e-07 60.8 78 50.0
Sc13g0009440 Simmondsia chinensis HOM05D003548 ORTHO05D004066 5.3e-07 60.5 133 32.3
Dinv35294 Davidia involucrata HOM05D003548 ORTHO05D004066 6.9e-07 60.1 152 32.2
ECA246G0635 Erigeron canadensis HOM05D003548 ORTHO05D004066 9.1e-07 59.7 238 27.3
HanXRQChr15g0493381 Helianthus annuus HOM05D003548 ORTHO05D004066 2.0e-06 58.5 167 32.3
Pp3c11_24820 Physcomitrium patens HOM05D031910 ORTHO05D004558 2.0e-06 58.5 131 35.1
Mapoly0048s0020 Marchantia polymorpha HOM05D003963 ORTHO05D004558 2.6e-06 58.2 185 31.4
ECA232G3387 Erigeron canadensis HOM05D003548 ORTHO05D004066 3.4e-06 57.8 94 38.3
Rhsim03G0196900 Rhododendron simsii HOM05D003548 ORTHO05D004066 4.5e-06 57.4 105 40.0
Pp3c7_8590 Physcomitrium patens HOM05D031910 ORTHO05D004558 5.9e-06 57.0 161 32.9
Zm00001eb204020 Zea mays HOM05D003548 ORTHO05D004066 7.7e-06 56.6 95 36.8


User provided reference genes

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