Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0336301 Helianthus annuus HOM05D006458 ORTHO05D008433 9.0e-104 380.2 181 100.0
Lsat_1_v5_gn_7_109420 Lactuca sativa HOM05D006458 ORTHO05D008433 2.9e-70 268.9 143 88.8
CiPaw.12G128400 Carya illinoinensis HOM05D006458 ORTHO05D008433 1.8e-64 249.6 146 77.4
Cfa020375 Carpinus fangiana HOM05D006458 ORTHO05D008433 9.1e-64 247.3 140 80.0
Manes.03G125000 Manihot esculenta HOM05D006458 ORTHO05D008433 9.1e-64 247.3 146 77.4
Dinv22275 Davidia involucrata HOM05D006458 ORTHO05D008433 5.9e-63 244.6 136 81.6
Prupe.4G210000 Prunus persica HOM05D006458 ORTHO05D008433 1.3e-62 243.4 147 78.9
QL08p011516 Quercus lobata HOM05D006458 ORTHO05D008433 1.7e-62 243.0 146 76.7
Lj1A870G91 Lonicera japonica HOM05D006458 ORTHO05D008433 3.8e-62 241.9 143 77.6
SalBow5G1944 Salvia bowleyana HOM05D006458 ORTHO05D008433 6.5e-62 241.1 140 78.6
CSS0025826 Camellia sinensis var. sinensis HOM05D006458 ORTHO05D008433 1.5e-61 240.0 123 86.2
CANSAT11G2101 Cannabis sativa HOM05D006458 ORTHO05D008433 1.5e-61 240.0 148 74.3
TWI39G1057 Tripterygium wilfordii HOM05D006458 ORTHO05D008433 1.9e-61 239.6 142 78.2
Gorai.013G160500 Gossypium raimondii HOM05D006458 ORTHO05D008433 3.2e-61 238.8 153 71.2
Gohir.A13G138900 Gossypium hirsutum HOM05D006458 ORTHO05D008433 4.2e-61 238.4 135 78.5
Ciclev10009738m.g Citrus clementina HOM05D006458 ORTHO05D008433 5.5e-61 238.0 152 73.0
Migut.M01780 Erythranthe guttata HOM05D006458 ORTHO05D008433 5.5e-61 238.0 140 79.3
MD03G1206100 Malus domestica HOM05D006458 ORTHO05D008433 5.5e-61 238.0 135 80.0
MD11G1221600 Malus domestica HOM05D006458 ORTHO05D008433 5.5e-61 238.0 144 75.0
Haze_09655 Corylus avellana HOM05D000653 ORTHO05D008581 7.2e-61 237.7 138 79.7
Hma1.2p1_0673F.1_g201190 Hydrangea macrophylla HOM05D006458 ORTHO05D008433 9.4e-61 237.3 143 76.2
SGA_v2.0_scaffold7G03986 Striga asiatica HOM05D006458 ORTHO05D008433 1.2e-60 236.9 136 78.7
DCAR_010044 Daucus carota HOM05D006458 ORTHO05D008433 2.1e-60 236.1 138 76.8
Medtr3g051110 Medicago truncatula HOM05D006458 ORTHO05D008433 2.7e-60 235.7 142 74.6
Ca_14717_v3 Cicer arietinum L. HOM05D006458 ORTHO05D008433 3.6e-60 235.3 143 75.5
CAN.G416.46 Capsicum annuum HOM05D006458 ORTHO05D008433 4.7e-60 235.0 145 73.8
Sed0021211 Sechium edule HOM05D006458 ORTHO05D008433 6.1e-60 234.6 146 73.3
GSVIVG01037612001 Vitis vinifera HOM05D006458 ORTHO05D008433 6.1e-60 234.6 127 80.3
Duzib170G0083 Durio zibethinus HOM05D006458 ORTHO05D008433 8.0e-60 234.2 135 77.0
Duzib170G1029 Durio zibethinus HOM05D006458 ORTHO05D008433 8.0e-60 234.2 135 77.0
Hma1.2p1_1271F.1_g271730 Hydrangea macrophylla HOM05D006458 ORTHO05D008433 8.0e-60 234.2 134 79.1
PGSC0003DMG400001097 Solanum tuberosum HOM05D006458 ORTHO05D008433 8.0e-60 234.2 136 78.7
CSS0046732 Camellia sinensis var. sinensis HOM05D006458 ORTHO05D008433 1.4e-59 233.4 126 81.7
Solyc12g005150.2 Solanum lycopersicum HOM05D006458 ORTHO05D008433 1.8e-59 233.0 136 77.9
Dinv40738 Davidia involucrata HOM05D000653 ORTHO05D008581 2.3e-59 232.6 127 82.7
Potri.011G137100 Populus trichocarpa HOM05D006458 ORTHO05D008433 2.3e-59 232.6 144 75.7
MSTRG.15157 Avicennia marina HOM05D006458 ORTHO05D008433 3.0e-59 232.3 149 73.2
Cc05_g13560 Coffea canephora HOM05D006458 ORTHO05D008433 3.0e-59 232.3 123 83.7
Nitab4.5_0001604g0080 Nicotiana tabacum HOM05D006458 ORTHO05D008433 3.0e-59 232.3 144 76.4
Nitab4.5_0000749g0130 Nicotiana tabacum HOM05D006458 ORTHO05D008433 4.0e-59 231.9 136 77.9
Psat5g192520 Pisum sativum HOM05D006458 ORTHO05D008433 4.0e-59 231.9 142 73.2
Thecc.07G043100 Theobroma cacao HOM05D006458 ORTHO05D008433 4.0e-59 231.9 143 75.5
Nitab4.5_0004336g0030 Nicotiana tabacum HOM05D006458 ORTHO05D008433 5.2e-59 231.5 136 79.4
Sabra16G0288000 Salix brachista HOM05D006458 ORTHO05D008433 6.7e-59 231.1 144 73.6
Glyma.18G099800 Glycine max HOM05D006458 ORTHO05D008433 8.8e-59 230.7 145 72.4
Lj6g0005932 Lotus japonicus HOM05D006458 ORTHO05D008433 8.8e-59 230.7 147 73.5
Phvul.005G120100 Phaseolus vulgaris HOM05D006458 ORTHO05D008433 8.8e-59 230.7 132 78.0
Sopen12g001140 Solanum pennellii HOM05D006458 ORTHO05D008433 8.8e-59 230.7 136 77.2
Actinidia05107 Actinidia chinensis HOM05D006458 ORTHO05D008433 1.2e-58 230.3 119 84.9
Cpa.g.sc97.30 Carica papaya HOM05D006458 ORTHO05D008433 1.2e-58 230.3 143 74.8
Duzib170G0736 Durio zibethinus HOM05D006458 ORTHO05D008433 1.2e-58 230.3 135 75.6
FAN11G3779 Fragaria x ananassa HOM05D006458 ORTHO05D008433 1.2e-58 230.3 146 71.2
Gohir.D13G143700 Gossypium hirsutum HOM05D006458 ORTHO05D008433 1.2e-58 230.3 152 69.7
Nitab4.5_0000653g0030 Nicotiana tabacum HOM05D006458 ORTHO05D008433 1.2e-58 230.3 136 76.5
Phvul.006G040400 Phaseolus vulgaris HOM05D006458 ORTHO05D008433 1.2e-58 230.3 130 78.5
VMungo0540G0475 Vigna mungo HOM05D006458 ORTHO05D008433 1.2e-58 230.3 132 78.0
FvH4_3g22360 Fragaria vesca HOM05D006458 ORTHO05D008433 2.0e-58 229.6 146 71.2
Glyma.08G314400 Glycine max HOM05D006458 ORTHO05D008433 2.6e-58 229.2 134 77.6
arahy.Tifrunner.gnm1.ann1.JDXG8H Arachis hypogaea HOM05D006458 ORTHO05D008433 3.3e-58 228.8 145 71.7
FAN21G0544 Fragaria x ananassa HOM05D006458 ORTHO05D008433 4.4e-58 228.4 146 71.2
arahy.Tifrunner.gnm1.ann1.717SVK Arachis hypogaea HOM05D006458 ORTHO05D008433 5.7e-58 228.0 145 71.7
COL.COLO4_09642 Corchorus olitorius HOM05D000451 ORTHO05D008433 5.7e-58 228.0 158 66.5
Peaxi162Scf00450g00732 Petunia axillaris HOM05D006458 ORTHO05D008433 5.7e-58 228.0 134 76.9
TAR629G1817 Trochodendron aralioides HOM05D006458 ORTHO05D008433 7.5e-58 227.6 139 73.4
Lalb_Chr15g0081001 Lupinus albus HOM05D006458 ORTHO05D008433 2.8e-57 225.7 136 76.5
ClCG10G005510 Citrullus lanatus HOM05D006458 ORTHO05D008433 3.7e-57 225.3 137 75.9
CsaV3_3G005240 Cucumis sativus L. HOM05D006458 ORTHO05D008433 3.7e-57 225.3 137 75.2
RcHm_v2.0_Chr5g0038891 Rosa chinensis HOM05D006458 ORTHO05D008433 3.7e-57 225.3 146 71.2
Gohir.A01G078500 Gossypium hirsutum HOM05D006458 ORTHO05D008433 1.4e-56 223.4 135 72.6
Gorai.002G087500 Gossypium raimondii HOM05D006458 ORTHO05D008433 2.4e-56 222.6 146 68.5
Gohir.D01G065600 Gossypium hirsutum HOM05D006458 ORTHO05D008433 3.1e-56 222.2 146 68.5
TAR626G0847 Trochodendron aralioides HOM05D006458 ORTHO05D008433 3.1e-56 222.2 144 70.1
SalBow7G4274 Salvia bowleyana HOM05D006458 ORTHO05D008433 7.0e-56 221.1 169 63.9
Aqoxy2G01543 Aquilegia oxysepala HOM05D006458 ORTHO05D008433 9.1e-56 220.7 146 67.1
Thhalv10014954m.g Eutrema salsugineum HOM05D006458 ORTHO05D008433 1.6e-55 219.9 143 72.7
Sp6g16820 Schrenkiella parvula HOM05D006458 ORTHO05D008433 1.6e-55 219.9 168 63.7
Sc03g0008720 Simmondsia chinensis HOM05D006458 ORTHO05D008433 1.6e-55 219.9 144 71.5
Carub.0008s1515 Capsella rubella HOM05D006458 ORTHO05D008433 1.3e-54 216.9 144 70.8
PSO541G1528 Papaver somniferum HOM05D006458 ORTHO05D008433 1.3e-54 216.9 132 72.7
ATR0752G141 Amborella trichopoda HOM05D006458 ORTHO05D008433 1.7e-54 216.5 133 70.7
Zm00001eb178010 Zea mays HOM05D006458 ORTHO05D008433 1.7e-54 216.5 138 68.8
AL8G30300 Arabidopsis lyrata HOM05D006458 ORTHO05D008433 2.9e-54 215.7 144 70.8
PGR031G1917 Punica granatum HOM05D006458 ORTHO05D008433 2.9e-54 215.7 124 78.2
BcaB08g35852 Brassica carinata HOM05D006458 ORTHO05D008433 3.8e-54 215.3 144 71.5
AUR62015736 Chenopodium quinoa HOM05D006458 ORTHO05D008433 3.8e-54 215.3 136 73.5
AUR62020475 Chenopodium quinoa HOM05D006458 ORTHO05D008433 3.8e-54 215.3 142 69.7
AT5G54855 Arabidopsis thaliana HOM05D006458 ORTHO05D008433 5.0e-54 214.9 144 70.8
PSO675G3423 Papaver somniferum HOM05D006458 ORTHO05D008433 5.0e-54 214.9 132 72.7
Aa31LG3G10770 Aethionema arabicum HOM05D006458 ORTHO05D008433 6.5e-54 214.5 144 69.4
C09p45410 Brassica napus HOM05D006458 ORTHO05D008433 6.5e-54 214.5 136 74.3
BcaC04g20291 Brassica carinata HOM05D006458 ORTHO05D008433 8.5e-54 214.2 123 79.7
BraA10t43315Z Brassica rapa HOM05D006458 ORTHO05D008433 1.1e-53 213.8 144 71.5
CARHR268190 Cardamine hirsuta HOM05D006458 ORTHO05D008433 3.2e-53 212.2 123 78.9
A10p12190 Brassica napus HOM05D006458 ORTHO05D008433 4.2e-53 211.8 144 70.8
MBI18_g24806_MAGBIO Magnolia biondii HOM05D006458 ORTHO05D008433 5.5e-53 211.5 136 69.9
vmacro09731 Vaccinium macrocarpon HOM05D006458 ORTHO05D008433 5.5e-53 211.5 171 60.2
EL10Ac4g07850 Beta vulgaris HOM05D006458 ORTHO05D008433 7.2e-53 211.1 147 68.7
THA.LOC104817659 Tarenaya hassleriana HOM05D006458 ORTHO05D008433 7.2e-53 211.1 143 70.6
Ah.04g165770 Amaranthus hybridus HOM05D006458 ORTHO05D008433 1.2e-52 210.3 145 66.2
CDE05G1373 Ceratophyllum demersum HOM05D006458 ORTHO05D008433 2.7e-52 209.1 143 67.1
Os02g0317800 Oryza sativa ssp. japonica HOM05D006458 ORTHO05D008433 4.7e-52 208.4 124 73.4
Hund02079 Selenicereus undatus HOM05D006458 ORTHO05D008433 4.7e-52 208.4 140 67.9
CDE02G3449 Ceratophyllum demersum HOM05D006458 ORTHO05D008433 1.2e-50 203.8 130 71.5
unitig_8.g4602 Utricularia gibba HOM05D006458 ORTHO05D008433 1.5e-50 203.4 138 67.4
RhsimUnG0251700 Rhododendron simsii HOM05D006458 ORTHO05D008433 6.3e-49 198.0 195 51.3
CSS0035522 Camellia sinensis var. sinensis HOM05D006458 ORTHO05D008433 1.8e-48 196.4 103 87.4
ECA236G2465 Erigeron canadensis HOM05D000653 ORTHO05D008581 9.1e-48 194.1 97 89.7
HPP92_005293 Vanilla planifolia HOM05D006458 ORTHO05D008433 1.6e-47 193.4 132 64.4
Nn1g03576 Nelumbo nucifera HOM05D006458 ORTHO05D008433 5.9e-47 191.4 117 73.5
Oeu062597.2 Olea europaea HOM05D006458 ORTHO05D008433 8.0e-44 181.0 92 87.0
Sabra11G0123000 Salix brachista HOM05D006458 ORTHO05D008433 1.4e-43 180.3 177 54.2
SalBow7G3069 Salvia bowleyana HOM05D006458 ORTHO05D008433 1.2e-42 177.2 94 84.0
MELO3C031911.2 Cucumis melo HOM05D006458 ORTHO05D008433 9.8e-42 174.1 99 79.8
Eucgr.F03456 Eucalyptus grandis HOM05D006458 ORTHO05D008433 2.4e-40 169.5 93 80.6
Nitab4.5_0000296g0120 Nicotiana tabacum HOM05D006458 ORTHO05D008433 7.3e-37 157.9 95 74.7
Atru.chr2.3327 Acer truncatum HOM05D006458 ORTHO05D008433 1.8e-35 153.3 88 78.4
SEGI_29279 Sequoiadendron giganteum HOM05D006458 ORTHO05D008433 3.4e-34 149.1 81 84.0
AUR62029374 Chenopodium quinoa HOM05D001363 ORTHO05D006255 1.1e-21 107.5 110 54.5
Atru.chr2.3388 Acer truncatum HOM05D006458 ORTHO05D008433 4.1e-16 89.0 63 63.5
MD01G1183100 Malus domestica HOM05D005560 ORTHO05D006862 1.0e-14 84.3 43 81.4
FAN25G2931 Fragaria x ananassa HOM05D006458 ORTHO05D008433 7.6e-10 68.2 35 91.4
TPR.G13209 Trifolium pratense HOM05D006458 ORTHO05D008433 6.4e-09 65.1 46 60.9
RcHm_v2.0_Chr5g0038871 Rosa chinensis HOM05D006458 ORTHO05D008433 8.4e-09 64.7 42 69.0
Nitab4.5_0000286g0120 Nicotiana tabacum HOM05D006458 ORTHO05D008433 3.5e-07 59.3 52 59.6
MD13G1229600 Malus domestica HOM05D006458 ORTHO05D245398 8.7e-06 54.7 41 70.7


User provided reference genes

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