Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0336271 Helianthus annuus HOM05D005769 ORTHO05D006851 1.0e-82 310.1 164 100.0
ECA236G2121 Erigeron canadensis HOM05D005769 ORTHO05D006851 7.5e-49 197.6 179 64.8
Hma1.2p1_1271F.1_g271830 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 4.9e-32 141.7 159 55.3
Hma1.2p1_1609F.1_g293426 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 4.9e-32 141.7 159 55.3
Dinv40735 Davidia involucrata HOM05D005769 ORTHO05D006851 1.4e-31 140.2 166 54.2
MD11G1222100 Malus domestica HOM05D005769 ORTHO05D006851 4.7e-27 125.2 167 47.3
Ciclev10010329m.g Citrus clementina HOM05D005769 ORTHO05D006851 6.2e-27 124.8 159 51.6
Lj8E167T2 Lonicera japonica HOM05D005769 ORTHO05D006851 4.0e-26 122.1 166 50.0
Oeu005460.1 Olea europaea HOM05D005769 ORTHO05D006851 1.5e-25 120.2 169 46.2
Rhsim04G0001000 Rhododendron simsii HOM05D005769 ORTHO05D006851 4.4e-25 118.6 167 49.1
Prupe.4G209200 Prunus persica HOM05D005769 ORTHO05D006851 7.5e-25 117.9 168 47.0
Cc05_g13510 Coffea canephora HOM05D005769 ORTHO05D006851 1.3e-24 117.1 160 49.4
Rhsim04G0002100 Rhododendron simsii HOM05D005769 ORTHO05D006851 1.3e-24 117.1 167 48.5
Duzib170G0312 Durio zibethinus HOM05D005769 ORTHO05D006851 2.9e-24 115.9 167 49.7
Nn1g03582 Nelumbo nucifera HOM05D005769 ORTHO05D006851 2.9e-24 115.9 171 45.0
Thecc.07G043800 Theobroma cacao HOM05D005769 ORTHO05D006851 3.7e-24 115.5 167 47.3
Atru.chr2.3278 Acer truncatum HOM05D005769 ORTHO05D006851 6.4e-24 114.8 162 48.1
Manes.15G073700 Manihot esculenta HOM05D005769 ORTHO05D006851 1.9e-23 113.2 166 47.6
Manes.03G126700 Manihot esculenta HOM05D005769 ORTHO05D006851 2.4e-23 112.8 166 45.8
Lj1P869T51 Lonicera japonica HOM05D005769 ORTHO05D006851 7.1e-23 111.3 166 48.2
Potri.001G421000 Populus trichocarpa HOM05D005769 ORTHO05D006851 1.2e-22 110.5 167 44.3
Nitab4.5_0000397g0340 Nicotiana tabacum HOM05D005769 ORTHO05D006851 1.6e-22 110.2 165 44.8
Nitab4.5_0000653g0070 Nicotiana tabacum HOM05D005769 ORTHO05D006851 1.6e-22 110.2 166 45.8
Sopen10g002310 Solanum pennellii HOM05D005769 ORTHO05D006851 2.1e-22 109.8 171 46.8
QL08p011874 Quercus lobata HOM05D005769 ORTHO05D006851 2.7e-22 109.4 169 47.3
MSTRG.6907 Avicennia marina HOM05D005769 ORTHO05D006851 3.5e-22 109.0 156 44.9
Cpa.g.sc97.35 Carica papaya HOM05D005769 ORTHO05D006851 3.5e-22 109.0 162 45.7
Duzib213G1024 Durio zibethinus HOM05D005769 ORTHO05D006851 3.5e-22 109.0 166 47.0
Potri.011G136600 Populus trichocarpa HOM05D005769 ORTHO05D006851 3.5e-22 109.0 171 45.6
HanXRQChr05g0159131 Helianthus annuus HOM05D005769 ORTHO05D006851 4.6e-22 108.6 157 45.2
unitig_0.g2389 Utricularia gibba HOM05D005769 ORTHO05D006851 6.0e-22 108.2 154 45.5
Nitab4.5_0013016g0010 Nicotiana tabacum HOM05D005769 ORTHO05D006851 7.8e-22 107.8 160 45.6
QL08p012043 Quercus lobata HOM05D005769 ORTHO05D006851 7.8e-22 107.8 173 45.7
Nitab4.5_0000749g0110 Nicotiana tabacum HOM05D005769 ORTHO05D006851 1.0e-21 107.5 166 44.6
PGSC0003DMG400014393 Solanum tuberosum HOM05D005769 ORTHO05D006851 1.0e-21 107.5 169 46.7
RcHm_v2.0_Chr5g0038281 Rosa chinensis HOM05D005769 ORTHO05D006851 1.3e-21 107.1 167 43.1
Solyc10g006360.2 Solanum lycopersicum HOM05D005769 ORTHO05D006851 1.3e-21 107.1 171 46.2
Gohir.D01G065000 Gossypium hirsutum HOM05D005769 ORTHO05D006851 1.7e-21 106.7 171 46.2
Haze_09647 Corylus avellana HOM05D005769 ORTHO05D006851 3.9e-21 105.5 165 44.8
Gohir.A01G077900 Gossypium hirsutum HOM05D005769 ORTHO05D006851 3.9e-21 105.5 167 44.9
Gorai.002G086700 Gossypium raimondii HOM05D005769 ORTHO05D006851 3.9e-21 105.5 169 45.6
COL.COLO4_09632 Corchorus olitorius HOM05D005769 ORTHO05D006851 6.6e-21 104.8 169 45.0
Peaxi162Scf00450g00084 Petunia axillaris HOM05D005769 ORTHO05D006851 8.6e-21 104.4 164 47.6
TAR626G0147 Trochodendron aralioides HOM05D005769 ORTHO05D006851 8.6e-21 104.4 173 42.8
Cfa020385 Carpinus fangiana HOM05D005769 ORTHO05D006851 1.1e-20 104.0 167 44.3
FvH4_3g22210 Fragaria vesca HOM05D005769 ORTHO05D006851 1.5e-20 103.6 167 40.7
FAN11G0604 Fragaria x ananassa HOM05D005769 ORTHO05D006851 1.5e-20 103.6 167 40.7
FAN16G0333 Fragaria x ananassa HOM05D005769 ORTHO05D006851 1.5e-20 103.6 167 40.7
Solyc07g064320.3 Solanum lycopersicum HOM05D005769 ORTHO05D006851 1.5e-20 103.6 166 43.4
Migut.H01842 Erythranthe guttata HOM05D005769 ORTHO05D006851 1.9e-20 103.2 153 45.8
Sabra16G0285900 Salix brachista HOM05D005769 ORTHO05D006851 1.9e-20 103.2 165 43.0
CANSAT21G1553 Cannabis sativa HOM05D005769 ORTHO05D006851 2.5e-20 102.8 165 45.5
FAN21G0668 Fragaria x ananassa HOM05D005769 ORTHO05D006851 2.5e-20 102.8 167 40.7
Lalb_Chr04g0248581 Lupinus albus HOM05D005769 ORTHO05D006851 2.5e-20 102.8 169 43.8
Migut.M01783 Erythranthe guttata HOM05D005769 ORTHO05D006851 4.3e-20 102.1 158 44.9
FAN25G3736 Fragaria x ananassa HOM05D005769 ORTHO05D006851 4.3e-20 102.1 167 40.7
TWI38G1097 Tripterygium wilfordii HOM05D005769 ORTHO05D006851 7.3e-20 101.3 170 44.1
arahy.Tifrunner.gnm1.ann1.B7V00M Arachis hypogaea HOM05D005769 ORTHO05D006851 9.5e-20 100.9 170 46.5
Sopen07g032470 Solanum pennellii HOM05D005769 ORTHO05D006851 9.5e-20 100.9 166 42.8
TWI39G0743 Tripterygium wilfordii HOM05D005769 ORTHO05D006851 9.5e-20 100.9 167 43.1
PGSC0003DMG400013920 Solanum tuberosum HOM05D005769 ORTHO05D006851 2.1e-19 99.8 166 44.6
CiPaw.11G187200 Carya illinoinensis HOM05D005769 ORTHO05D006851 2.8e-19 99.4 164 43.9
CAN.G337.106 Capsicum annuum HOM05D005769 ORTHO05D006851 6.2e-19 98.2 166 44.6
Glyma.14G025400 Glycine max HOM05D005769 ORTHO05D006851 6.2e-19 98.2 170 41.8
Medtr5g092090 Medicago truncatula HOM05D005769 ORTHO05D006851 6.2e-19 98.2 171 43.3
Peaxi162Scf01097g00025 Petunia axillaris HOM05D005769 ORTHO05D006851 1.1e-18 97.4 163 42.3
arahy.Tifrunner.gnm1.ann1.B9FWIC Arachis hypogaea HOM05D005769 ORTHO05D006851 1.4e-18 97.1 170 43.5
LjContig00351g0007061 Lotus japonicus HOM05D005769 ORTHO05D006851 1.4e-18 97.1 175 42.9
PGR031G3409 Punica granatum HOM05D005769 ORTHO05D006851 1.4e-18 97.1 166 42.8
SalBow7G1695 Salvia bowleyana HOM05D005769 ORTHO05D006851 1.8e-18 96.7 165 46.7
PGSC0003DMG400001093 Solanum tuberosum HOM05D005769 ORTHO05D006851 1.8e-18 96.7 166 44.6
THA.LOC104813420 Tarenaya hassleriana HOM05D005769 ORTHO05D006851 2.4e-18 96.3 167 42.5
CiPaw.12G128000 Carya illinoinensis HOM05D005769 ORTHO05D006851 4.0e-18 95.5 164 41.5
Lj4g0016834 Lotus japonicus HOM05D005769 ORTHO05D006851 5.2e-18 95.1 173 42.8
VMungo0647G1996 Vigna mungo HOM05D005769 ORTHO05D006851 5.2e-18 95.1 178 40.4
Ca_06306_v3 Cicer arietinum L. HOM05D005769 ORTHO05D006851 6.8e-18 94.7 179 43.0
Phvul.008G265600 Phaseolus vulgaris HOM05D005769 ORTHO05D006851 2.6e-17 92.8 170 41.8
PSO675G2145 Papaver somniferum HOM05D005769 ORTHO05D006851 7.6e-17 91.3 165 40.6
Gohir.A04G019100 Gossypium hirsutum HOM05D005769 ORTHO05D006851 9.9e-17 90.9 161 42.2
PSO541G5959 Papaver somniferum HOM05D005769 ORTHO05D006851 9.9e-17 90.9 166 40.4
BcaB08g35851 Brassica carinata HOM05D005769 ORTHO05D006851 1.3e-16 90.5 175 41.7
Gohir.D05G366600 Gossypium hirsutum HOM05D005769 ORTHO05D006851 1.7e-16 90.1 161 41.6
Gorai.009G425000 Gossypium raimondii HOM05D005769 ORTHO05D006851 2.2e-16 89.7 161 42.2
BcaC04g20292 Brassica carinata HOM05D005769 ORTHO05D006851 2.9e-16 89.4 175 41.1
C09p45400 Brassica napus HOM05D005769 ORTHO05D006851 2.9e-16 89.4 175 41.1
BolC9t57410H Brassica oleracea HOM05D005769 ORTHO05D006851 2.9e-16 89.4 175 41.1
BraA10t43314Z Brassica rapa HOM05D005769 ORTHO05D006851 2.9e-16 89.4 175 41.1
Glyma.02G289500 Glycine max HOM05D005769 ORTHO05D006851 1.1e-15 87.4 172 41.3
Aa31LG3G10760 Aethionema arabicum HOM05D005769 ORTHO05D006851 3.2e-15 85.9 160 39.4
AL8G30290 Arabidopsis lyrata HOM05D005769 ORTHO05D006851 5.4e-15 85.1 198 38.4
AT5G54850 Arabidopsis thaliana HOM05D005769 ORTHO05D006851 1.2e-14 84.0 198 36.4
ClCG05G014450 Citrullus lanatus HOM05D005769 ORTHO05D006851 1.2e-14 84.0 162 38.9
CARHR268180 Cardamine hirsuta HOM05D005769 ORTHO05D006851 2.7e-14 82.8 177 37.3
Aqoxy1G03294 Aquilegia oxysepala HOM05D005769 ORTHO05D006851 7.8e-14 81.3 168 38.1
VMungo0540G0361 Vigna mungo HOM05D005769 ORTHO05D006851 7.8e-14 81.3 162 38.9
Thhalv10014809m.g Eutrema salsugineum HOM05D005769 ORTHO05D006851 1.0e-13 80.9 176 38.1
A10p12180 Brassica napus HOM05D005769 ORTHO05D006851 1.3e-13 80.5 201 36.8
MELO3C018076.2 Cucumis melo HOM05D005769 ORTHO05D006851 1.7e-13 80.1 172 39.5
Oeu042920.1 Olea europaea HOM05D005249 ORTHO05D006457 2.3e-13 79.7 145 39.3
CsaV3_3G023280 Cucumis sativus L. HOM05D005769 ORTHO05D006851 3.0e-13 79.3 171 38.6
Sed0023999 Sechium edule HOM05D005769 ORTHO05D006851 5.1e-13 78.6 163 35.6
Lj6g0021335 Lotus japonicus HOM05D005769 ORTHO05D006851 6.6e-13 78.2 171 37.4
Carub.0008s1514 Capsella rubella HOM05D005769 ORTHO05D006851 8.7e-13 77.8 176 36.9
arahy.Tifrunner.gnm1.ann1.0M423A Arachis hypogaea HOM05D005769 ORTHO05D006851 1.9e-12 76.6 163 34.4
SGA_v2.0_scaffold8G04301 Striga asiatica HOM05D005769 ORTHO05D006851 1.9e-12 76.6 155 40.0
Sp6g16810 Schrenkiella parvula HOM05D005769 ORTHO05D006851 5.6e-12 75.1 184 35.9
ATR0752G130 Amborella trichopoda HOM05D005769 ORTHO05D006851 2.1e-11 73.2 178 33.1
HPP92_014114 Vanilla planifolia HOM05D005769 ORTHO05D006851 2.1e-11 73.2 168 36.3
Sed0008399 Sechium edule HOM05D005769 ORTHO05D006851 2.8e-11 72.8 172 35.5
Zm00001eb322840 Zea mays HOM05D005769 ORTHO05D006851 4.7e-11 72.0 172 38.4
Glyma.18G101700 Glycine max HOM05D005769 ORTHO05D006851 6.2e-11 71.6 164 37.8
AUR62015707 Chenopodium quinoa HOM05D005769 ORTHO05D006851 1.8e-10 70.1 163 36.8
AUR62020499 Chenopodium quinoa HOM05D005769 ORTHO05D006851 2.4e-10 69.7 172 38.4
Psat2g015240 Pisum sativum HOM05D005769 ORTHO05D006851 5.2e-10 68.6 187 33.2
Sc16g0006260 Simmondsia chinensis HOM05D005769 ORTHO05D006851 5.2e-10 68.6 198 35.9
Glyma.09G100100 Glycine max HOM05D005769 ORTHO05D006851 6.9e-10 68.2 158 34.8
CDE02G4799 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 9.0e-10 67.8 160 38.1
Phvul.006G038800 Phaseolus vulgaris HOM05D005769 ORTHO05D006851 1.5e-09 67.0 161 37.3
MBI18_g09843_MAGBIO Magnolia biondii HOM05D005769 ORTHO05D006851 5.8e-09 65.1 139 38.8
Oeu062604.3 Olea europaea HOM05D005769 ORTHO05D006851 7.6e-09 64.7 142 39.4
PSO832G0238 Papaver somniferum HOM05D005769 ORTHO05D006851 2.2e-08 63.2 180 29.4
HPP92_012395 Vanilla planifolia HOM05D005769 ORTHO05D006851 3.8e-08 62.4 152 31.6
HPP92_012322 Vanilla planifolia HOM05D005769 ORTHO05D006851 8.4e-08 61.2 152 32.2
Actinidia09713 Actinidia chinensis HOM05D005769 ORTHO05D006851 1.9e-07 60.1 152 36.8
CSS0032413 Camellia sinensis var. sinensis HOM05D005769 ORTHO05D006851 1.2e-06 57.4 148 35.1
Ah.04g165680 Amaranthus hybridus HOM05D005769 ORTHO05D006851 7.8e-06 54.7 151 33.8


User provided reference genes

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