Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0335921 Helianthus annuus HOM05D006512 ORTHO05D008027 1.4e-78 296.2 147 100.0
ECA236G0056 Erigeron canadensis HOM05D006512 ORTHO05D008027 3.1e-54 215.3 138 78.3
Lsat_1_v5_gn_7_111120 Lactuca sativa HOM05D006512 ORTHO05D008027 1.1e-48 196.8 138 69.6
CSS0043474 Camellia sinensis var. sinensis HOM05D006512 ORTHO05D008027 2.0e-40 169.5 140 64.3
Nitab4.5_0004829g0090 Nicotiana tabacum HOM05D006512 ORTHO05D008027 2.0e-40 169.5 143 62.9
Nitab4.5_0001393g0060 Nicotiana tabacum HOM05D006512 ORTHO05D008027 1.3e-39 166.8 143 62.2
Lj1C877G6 Lonicera japonica HOM05D006512 ORTHO05D008027 2.4e-38 162.5 142 60.6
PGR083G0988 Punica granatum HOM05D006512 ORTHO05D008027 5.3e-38 161.4 146 60.3
Cc05_g14010 Coffea canephora HOM05D006512 ORTHO05D008027 7.0e-38 161.0 144 60.4
Ciclev10007420m.g Citrus clementina HOM05D006512 ORTHO05D008027 9.1e-38 160.6 148 58.1
Actinidia05076 Actinidia chinensis HOM05D006512 ORTHO05D008027 1.2e-37 160.2 141 58.9
CAN.G492.3 Capsicum annuum HOM05D006512 ORTHO05D008027 2.6e-37 159.1 144 59.7
CANSAT11G0281 Cannabis sativa HOM05D006512 ORTHO05D008027 3.5e-37 158.7 145 58.6
Oeu024915.1 Olea europaea HOM05D006512 ORTHO05D008027 2.2e-36 156.0 143 58.7
QL08p009130 Quercus lobata HOM05D006512 ORTHO05D008027 6.5e-36 154.5 144 56.2
Prupe.4G218000 Prunus persica HOM05D006512 ORTHO05D008027 1.1e-35 153.7 150 56.7
Cpa.g.sc12.276 Carica papaya HOM05D006512 ORTHO05D008027 4.2e-35 151.8 145 57.2
THA.LOC104811621 Tarenaya hassleriana HOM05D006512 ORTHO05D008027 7.2e-35 151.0 145 54.5
GSVIVG01037689001 Vitis vinifera HOM05D006512 ORTHO05D008027 7.2e-35 151.0 145 56.6
PGSC0003DMG400014387 Solanum tuberosum HOM05D006512 ORTHO05D008027 2.1e-34 149.4 143 55.9
CiPaw.12G131800 Carya illinoinensis HOM05D006512 ORTHO05D008027 2.7e-34 149.1 143 53.8
C02p16450 Brassica napus HOM05D006512 ORTHO05D008027 3.6e-34 148.7 145 55.2
BolC2t07744H Brassica oleracea HOM05D006512 ORTHO05D008027 4.7e-34 148.3 145 55.2
AUR62020400 Chenopodium quinoa HOM05D006512 ORTHO05D008027 4.7e-34 148.3 148 54.1
BcaC03g14267 Brassica carinata HOM05D006512 ORTHO05D008027 6.1e-34 147.9 145 55.2
Hund23227 Selenicereus undatus HOM05D006512 ORTHO05D008027 8.0e-34 147.5 187 46.0
Haze_09710 Corylus avellana HOM05D006512 ORTHO05D008027 1.0e-33 147.1 146 55.5
Atru.chr2.3489 Acer truncatum HOM05D006512 ORTHO05D008027 1.4e-33 146.7 149 53.7
A02p09890 Brassica napus HOM05D006512 ORTHO05D008027 1.4e-33 146.7 145 55.2
vmacro02216 Vaccinium macrocarpon HOM05D006512 ORTHO05D008027 2.3e-33 146.0 164 51.2
TWI39G1152 Tripterygium wilfordii HOM05D006512 ORTHO05D008027 6.7e-33 144.4 143 55.2
Carub.0008s1539 Capsella rubella HOM05D006512 ORTHO05D008027 8.8e-33 144.1 145 52.4
Peaxi162Scf01615g00010 Petunia axillaris HOM05D006512 ORTHO05D008027 8.8e-33 144.1 139 59.0
EL10Ac4g07766 Beta vulgaris HOM05D006512 ORTHO05D008027 1.5e-32 143.3 146 54.8
AL8G30600 Arabidopsis lyrata HOM05D006512 ORTHO05D008027 2.0e-32 142.9 146 52.7
Glyma.02G293200 Glycine max HOM05D006512 ORTHO05D008027 2.0e-32 142.9 142 55.6
Thhalv10015403m.g Eutrema salsugineum HOM05D006512 ORTHO05D008027 4.4e-32 141.7 145 51.7
Ah.06g182620 Amaranthus hybridus HOM05D006512 ORTHO05D008027 7.5e-32 141.0 144 51.4
AUR62015819 Chenopodium quinoa HOM05D006512 ORTHO05D008027 9.7e-32 140.6 148 51.4
unitig_899.g15285 Utricularia gibba HOM05D006512 ORTHO05D008027 9.7e-32 140.6 138 54.3
Glyma.14G021200 Glycine max HOM05D006512 ORTHO05D008027 1.7e-31 139.8 141 56.0
Medtr5g093560 Medicago truncatula HOM05D006512 ORTHO05D008027 6.3e-31 137.9 144 52.1
Nn1g07218 Nelumbo nucifera HOM05D006512 ORTHO05D008027 6.3e-31 137.9 146 50.0
CARHR268440 Cardamine hirsuta HOM05D006512 ORTHO05D008027 8.2e-31 137.5 146 50.0
Gohir.D05G372700 Gossypium hirsutum HOM05D006512 ORTHO05D008027 8.2e-31 137.5 149 53.0
VMungo0647G0540 Vigna mungo HOM05D006512 ORTHO05D008027 8.2e-31 137.5 141 56.0
arahy.Tifrunner.gnm1.ann1.WH2E03 Arachis hypogaea HOM05D006512 ORTHO05D008027 1.1e-30 137.1 143 53.1
MD11G1213100 Malus domestica HOM05D006512 ORTHO05D008027 1.1e-30 137.1 151 53.0
arahy.Tifrunner.gnm1.ann1.DSL29X Arachis hypogaea HOM05D006512 ORTHO05D008027 1.4e-30 136.7 143 53.1
FAN11G0896 Fragaria x ananassa HOM05D006512 ORTHO05D008027 1.4e-30 136.7 145 55.2
TPR.G1164 Trifolium pratense HOM05D006512 ORTHO05D008027 1.4e-30 136.7 145 51.7
Duzib213G0172 Durio zibethinus HOM05D006512 ORTHO05D008027 1.8e-30 136.3 149 51.7
TAR626G0449 Trochodendron aralioides HOM05D006512 ORTHO05D008027 3.1e-30 135.6 149 51.7
FAN21G3399 Fragaria x ananassa HOM05D006512 ORTHO05D008027 2.0e-29 132.9 146 52.7
Lalb_Chr17g0348641 Lupinus albus HOM05D006512 ORTHO05D008027 2.0e-29 132.9 145 51.7
Sopen10g002210 Solanum pennellii HOM05D006512 ORTHO05D008027 2.0e-29 132.9 143 51.7
DCAR_022584 Daucus carota HOM05D006512 ORTHO05D008027 3.5e-29 132.1 137 53.3
Migut.H01809 Erythranthe guttata HOM05D006512 ORTHO05D008027 4.5e-29 131.7 146 53.4
Aa31LG5G12080 Aethionema arabicum HOM05D006512 ORTHO05D008027 5.9e-29 131.3 149 49.0
MBI07_g09094_MAGBIO Magnolia biondii HOM05D006512 ORTHO05D008027 1.0e-28 130.6 164 49.4
BcaB05g22180 Brassica carinata HOM05D006512 ORTHO05D008027 1.3e-28 130.2 148 50.0
CANSAT56G4300 Cannabis sativa HOM05D006512 ORTHO05D008027 1.7e-28 129.8 136 55.1
Eucgr.F00737 Eucalyptus grandis HOM05D006512 ORTHO05D008027 1.7e-28 129.8 149 51.0
PSO541G1419 Papaver somniferum HOM05D006512 ORTHO05D008027 1.7e-28 129.8 144 50.7
Solyc10g006250.3 Solanum lycopersicum HOM05D006512 ORTHO05D008027 5.0e-28 128.3 144 50.0
Sabra16G0234800 Salix brachista HOM05D006512 ORTHO05D008027 8.5e-28 127.5 140 52.1
Thecc.07G032200 Theobroma cacao HOM05D006512 ORTHO05D008027 1.5e-27 126.7 152 48.7
SGA_v2.0_scaffold172G39010 Striga asiatica HOM05D006512 ORTHO05D008027 1.0e-25 120.6 143 46.9
Actinidia32260 Actinidia chinensis HOM05D006512 ORTHO05D008027 4.4e-24 115.2 139 50.4
BraA02t06053Z Brassica rapa HOM05D006512 ORTHO05D008027 5.7e-24 114.8 173 40.5
Rhsim06G0220200 Rhododendron simsii HOM05D006512 ORTHO05D008027 1.7e-23 113.2 153 44.4
SEGI_25925 Sequoiadendron giganteum HOM05D006512 ORTHO05D008027 8.3e-23 110.9 143 43.4
ATR0585G019 Amborella trichopoda HOM05D006512 ORTHO05D008027 1.8e-22 109.8 147 44.2
Aqoxy1G03389_Aqoxy1G03390 Aquilegia oxysepala HOM05D006512 ORTHO05D008027 2.4e-22 109.4 158 43.0
HPP92_009832 Vanilla planifolia HOM05D006512 ORTHO05D008027 7.0e-22 107.8 155 46.5
COL.COLO4_09692 Corchorus olitorius HOM05D006512 ORTHO05D008027 9.1e-22 107.5 136 46.3
SHI26585 Sapria himalayana HOM05D006512 ORTHO05D008027 1.3e-20 103.6 178 41.0
FAN16G2871 Fragaria x ananassa HOM05D006512 ORTHO05D008027 2.9e-20 102.4 143 44.1
FAN25G1139 Fragaria x ananassa HOM05D006512 ORTHO05D008027 1.5e-19 100.1 142 43.7
FAN25G2516 Fragaria x ananassa HOM05D006512 ORTHO05D008027 4.2e-19 98.6 144 42.4
RcHm_v2.0_Chr5g0040811 Rosa chinensis HOM05D006512 ORTHO05D008027 4.7e-18 95.1 159 37.1
Mapoly0045s0119 Marchantia polymorpha HOM05D006512 ORTHO05D008027 2.3e-17 92.8 149 43.0
Os01g0698100 Oryza sativa ssp. japonica HOM05D006512 ORTHO05D008027 8.9e-17 90.9 159 40.3
VMungo0251G0907 Vigna mungo HOM05D001291 ORTHO05D008027 4.1e-14 82.0 79 57.0
Actinidia26683 Actinidia chinensis HOM05D006512 ORTHO05D008027 3.8e-12 75.5 94 46.8
MBI07_g37843_MAGBIO Magnolia biondii HOM05D006512 ORTHO05D008027 7.5e-08 61.2 206 29.1
C02p33950 Brassica napus HOM05D014849 ORTHO05D016773 4.1e-06 55.5 55 54.5
BolC2t09315H Brassica oleracea HOM05D014849 ORTHO05D016773 4.1e-06 55.5 55 54.5


User provided reference genes

Program Settings