Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0335831 Helianthus annuus HOM05D007449 ORTHO05D009504 1.3e-85 319.7 159 100.0
Lsat_1_v5_gn_7_111001 Lactuca sativa HOM05D007449 ORTHO05D009504 2.2e-77 292.4 160 91.2
ECA236G3627 Erigeron canadensis HOM05D007449 ORTHO05D009504 1.2e-75 286.6 158 86.7
Dinv42450 Davidia involucrata HOM05D007449 ORTHO05D009504 4.2e-73 278.1 153 88.9
CSS0049228 Camellia sinensis var. sinensis HOM05D007449 ORTHO05D009504 1.1e-68 263.5 153 82.4
FAN11G1945 Fragaria x ananassa HOM05D007449 ORTHO05D009504 1.8e-68 262.7 153 80.4
GSVIVG01036691001 Vitis vinifera HOM05D007449 ORTHO05D009504 1.8e-68 262.7 153 83.0
Hma1.2p1_1417F.1_g282110 Hydrangea macrophylla HOM05D007449 ORTHO05D009504 7.0e-68 260.8 153 85.0
FAN16G1652 Fragaria x ananassa HOM05D007449 ORTHO05D009504 4.5e-67 258.1 153 79.1
Aqoxy5G02136 Aquilegia oxysepala HOM05D007449 ORTHO05D009504 7.7e-67 257.3 153 80.4
FAN21G0170 Fragaria x ananassa HOM05D007449 ORTHO05D009504 1.3e-66 256.5 153 79.7
MD05G1240900 Malus domestica HOM05D007449 ORTHO05D009504 1.7e-66 256.1 153 79.7
ClCG02G018850 Citrullus lanatus HOM05D007449 ORTHO05D009504 2.9e-66 255.4 153 78.4
FvH4_3g13790 Fragaria vesca HOM05D007449 ORTHO05D009504 3.8e-66 255.0 153 79.1
Rhsim10G0133000 Rhododendron simsii HOM05D007449 ORTHO05D009504 3.8e-66 255.0 198 67.2
Glyma.08G160000 Glycine max HOM05D007449 ORTHO05D009504 5.0e-66 254.6 154 79.2
Nn1g09860 Nelumbo nucifera HOM05D007449 ORTHO05D009504 5.0e-66 254.6 153 81.0
CsaV3_6G013330 Cucumis sativus L. HOM05D007449 ORTHO05D009504 6.5e-66 254.2 153 81.0
RcHm_v2.0_Chr5g0022981 Rosa chinensis HOM05D007449 ORTHO05D009504 1.1e-65 253.4 153 79.1
CANSAT56G2387 Cannabis sativa HOM05D007449 ORTHO05D009504 1.5e-65 253.1 158 77.8
Prupe.4G124700 Prunus persica HOM05D007449 ORTHO05D009504 1.5e-65 253.1 153 79.1
Atru.chr1.9 Acer truncatum HOM05D007449 ORTHO05D009504 1.9e-65 252.7 157 77.1
COL.COLO4_32270 Corchorus olitorius HOM05D007449 ORTHO05D009504 1.9e-65 252.7 153 78.4
Ciclev10006094m.g Citrus clementina HOM05D007449 ORTHO05D009504 2.5e-65 252.3 158 76.6
Sabra10G0135300 Salix brachista HOM05D007449 ORTHO05D009504 3.2e-65 251.9 153 78.4
CiPaw.15G111100 Carya illinoinensis HOM05D007449 ORTHO05D009504 7.2e-65 250.8 159 74.2
MELO3C019608.2 Cucumis melo HOM05D007449 ORTHO05D009504 7.2e-65 250.8 153 79.7
Glyma.15G266900 Glycine max HOM05D007449 ORTHO05D009504 9.4e-65 250.4 154 77.9
SEGI_20644 Sequoiadendron giganteum HOM05D007449 ORTHO05D009504 9.4e-65 250.4 157 76.4
PGSC0003DMG400013314 Solanum tuberosum HOM05D007449 ORTHO05D009504 1.6e-64 249.6 154 79.9
Sed0001463 Sechium edule HOM05D007449 ORTHO05D009504 2.1e-64 249.2 153 79.1
Potri.010G175600 Populus trichocarpa HOM05D007449 ORTHO05D009504 3.6e-64 248.4 153 77.1
MBI02_g42634_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 4.7e-64 248.1 157 77.7
CDE02G1458 Ceratophyllum demersum HOM05D001125 ORTHO05D003189 1.0e-63 246.9 157 76.4
Sopen11g006460 Solanum pennellii HOM05D007449 ORTHO05D009504 1.0e-63 246.9 154 79.2
Solyc11g011610.2 Solanum lycopersicum HOM05D007449 ORTHO05D009504 1.4e-63 246.5 154 78.6
Nitab4.5_0006598g0010 Nicotiana tabacum HOM05D007449 ORTHO05D009504 1.8e-63 246.1 153 79.1
Solyc11g011620.3 Solanum lycopersicum HOM05D007449 ORTHO05D009504 1.8e-63 246.1 152 79.6
Migut.H01650 Erythranthe guttata HOM05D007449 ORTHO05D009504 4.0e-63 245.0 153 77.1
Cfa017774 Carpinus fangiana HOM05D007449 ORTHO05D009504 5.2e-63 244.6 151 75.5
Psat6g047080 Pisum sativum HOM05D007449 ORTHO05D009504 5.2e-63 244.6 154 76.0
SGA_v2.0_scaffold49G18211 Striga asiatica HOM05D007449 ORTHO05D009504 8.8e-63 243.8 156 76.3
Peaxi162Scf00124g01733 Petunia axillaris HOM05D007449 ORTHO05D009504 1.5e-62 243.0 154 76.0
CAN.G222.124 Capsicum annuum HOM05D007449 ORTHO05D009504 2.6e-62 242.3 154 77.9
Medtr1g046590 Medicago truncatula HOM05D007449 ORTHO05D009504 2.6e-62 242.3 154 75.3
Nitab4.5_0005124g0020 Nicotiana tabacum HOM05D007449 ORTHO05D009504 3.4e-62 241.9 153 78.4
MSTRG.13092 Avicennia marina HOM05D007449 ORTHO05D009504 4.4e-62 241.5 154 76.0
TAR629G0115 Trochodendron aralioides HOM05D007449 ORTHO05D009504 5.7e-62 241.1 187 65.8
arahy.Tifrunner.gnm1.ann1.4RN51I Arachis hypogaea HOM05D007449 ORTHO05D009504 9.8e-62 240.4 154 75.3
arahy.Tifrunner.gnm1.ann1.VWXD6N Arachis hypogaea HOM05D007449 ORTHO05D009504 9.8e-62 240.4 154 75.3
Oeu002792.1 Olea europaea HOM05D007449 ORTHO05D009775 9.8e-62 240.4 159 72.3
THA.LOC104812400 Tarenaya hassleriana HOM05D007449 ORTHO05D009504 9.8e-62 240.4 153 75.2
Lalb_Chr01g0015631 Lupinus albus HOM05D007449 ORTHO05D009504 1.7e-61 239.6 154 75.3
Os01g0679600 Oryza sativa ssp. japonica HOM05D007449 ORTHO05D009504 1.7e-61 239.6 152 73.7
vmacro12790 Vaccinium macrocarpon HOM05D007449 ORTHO05D009504 2.8e-61 238.8 221 58.8
TPR.G11303 Trifolium pratense HOM05D007449 ORTHO05D009504 6.3e-61 237.7 154 74.0
Zm00001eb156770 Zea mays HOM05D007449 ORTHO05D009504 6.3e-61 237.7 152 72.4
HPP92_008133 Vanilla planifolia HOM05D007449 ORTHO05D009504 1.1e-60 236.9 153 75.8
Gohir.A13G127500 Gossypium hirsutum HOM05D007449 ORTHO05D009504 1.4e-60 236.5 155 71.0
Gohir.D13G131200 Gossypium hirsutum HOM05D007449 ORTHO05D009504 1.4e-60 236.5 155 71.0
Nitab4.5_0001438g0030 Nicotiana tabacum HOM05D007449 ORTHO05D009504 1.4e-60 236.5 153 75.8
Duzib213G0878 Durio zibethinus HOM05D007449 ORTHO05D009504 1.8e-60 236.1 153 73.2
HPP92_008185 Vanilla planifolia HOM05D007449 ORTHO05D009504 3.1e-60 235.3 153 75.2
ATR0109G018 Amborella trichopoda HOM05D007449 ORTHO05D009504 4.1e-60 235.0 164 70.7
TWI38G0722 Tripterygium wilfordii HOM05D007449 ORTHO05D009504 4.1e-60 235.0 154 73.4
TWI38G2117 Tripterygium wilfordii HOM05D007449 ORTHO05D009504 4.1e-60 235.0 154 73.4
Manes.16G050159 Manihot esculenta HOM05D007449 ORTHO05D009504 5.4e-60 234.6 153 72.5
Gorai.013G147200 Gossypium raimondii HOM05D007449 ORTHO05D009504 9.1e-60 233.8 155 70.3
Cc08_g13080 Coffea canephora HOM05D007449 ORTHO05D009504 2.7e-59 232.3 161 70.2
Actinidia33338 Actinidia chinensis HOM05D007449 ORTHO05D009504 1.7e-58 229.6 133 85.0
AT1G79260 Arabidopsis thaliana HOM05D007449 ORTHO05D009504 1.6e-56 223.0 153 71.2
BcaB05g25191 Brassica carinata HOM05D007449 ORTHO05D009504 1.6e-56 223.0 153 69.9
BcaC03g15880 Brassica carinata HOM05D007449 ORTHO05D009504 1.6e-56 223.0 160 67.5
C02p36470 Brassica napus HOM05D007449 ORTHO05D009504 2.1e-56 222.6 160 67.5
Carub.0002s2613 Capsella rubella HOM05D007449 ORTHO05D009504 2.1e-56 222.6 153 71.2
BraA02t07273Z Brassica rapa HOM05D007449 ORTHO05D009504 3.6e-56 221.9 153 69.3
Thhalv10019230m.g Eutrema salsugineum HOM05D007449 ORTHO05D009504 6.1e-56 221.1 153 71.2
BolC2t09646H Brassica oleracea HOM05D007449 ORTHO05D009504 8.0e-56 220.7 153 68.0
AagrBONN_evm.TU.Sc2ySwM_362.2319 Anthoceros agrestis HOM05D007449 ORTHO05D009504 1.8e-55 219.5 156 67.3
A02p22730 Brassica napus HOM05D007449 ORTHO05D009504 3.0e-55 218.8 153 68.6
AL2G39860 Arabidopsis lyrata HOM05D007449 ORTHO05D009504 1.2e-54 216.9 155 69.7
Phvul.005G043600 Phaseolus vulgaris HOM05D007449 ORTHO05D009504 2.0e-54 216.1 154 68.2
Sp5g34340 Schrenkiella parvula HOM05D007449 ORTHO05D009504 4.4e-54 214.9 149 69.1
PGR031G0327 Punica granatum HOM05D007449 ORTHO05D009504 7.5e-54 214.2 157 68.8
SMO364G0724 Selaginella moellendorffii HOM05D007449 ORTHO05D009504 9.8e-54 213.8 155 69.0
Aa31LG4G1730 Aethionema arabicum HOM05D007449 ORTHO05D009504 2.2e-53 212.6 170 62.9
Eucgr.F04482 Eucalyptus grandis HOM05D007449 ORTHO05D009504 2.9e-53 212.2 151 68.9
Mapoly0054s0111 Marchantia polymorpha HOM05D007449 ORTHO05D009504 1.6e-51 206.5 151 66.2
QL04p096242 Quercus lobata HOM05D007449 ORTHO05D009504 1.9e-49 199.5 114 79.8
QL04p096050 Quercus lobata HOM05D007449 ORTHO05D009504 5.6e-49 198.0 113 79.6
Haze_18462 Corylus avellana HOM05D007449 ORTHO05D009504 4.7e-48 194.9 113 77.9
Nitab4.5_0009898g0010 Nicotiana tabacum HOM05D007449 ORTHO05D009504 8.0e-48 194.1 154 66.2
arahy.Tifrunner.gnm1.ann1.FIRH26 Arachis hypogaea HOM05D007449 ORTHO05D009504 1.8e-47 193.0 118 74.6
Pp3c6_12570 Physcomitrium patens HOM05D007449 ORTHO05D009504 2.9e-45 185.7 114 74.6
FAN25G3406 Fragaria x ananassa HOM05D007449 ORTHO05D009504 4.1e-44 181.8 108 82.4
Ca_03327_v3 Cicer arietinum L. HOM05D007449 ORTHO05D009504 2.1e-40 169.5 110 77.3
DCAR_013701 Daucus carota HOM05D007449 ORTHO05D009504 1.4e-39 166.8 95 76.8
Lj2A6T27 Lonicera japonica HOM05D007449 ORTHO05D009504 2.6e-38 162.5 91 81.3
MBI02_g17887_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 4.9e-37 158.3 157 56.1
Nitab4.5_0001650g0100 Nicotiana tabacum HOM05D000057 ORTHO05D000021 2.1e-27 126.3 119 58.0
Aa31LG4G1740 Aethionema arabicum HOM05D007449 ORTHO05D009504 2.5e-25 119.4 155 43.9
Nitab4.5_0007284g0070 Nicotiana tabacum HOM05D000057 ORTHO05D000021 4.9e-21 105.1 77 68.8
TPR.G35695 Trifolium pratense HOM05D000290 ORTHO05D044376 2.5e-17 92.8 108 52.8
MBI02_g30541_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 2.6e-14 82.8 81 64.2
Gohir.D03G088000 Gossypium hirsutum HOM05D007449 ORTHO05D000032 3.2e-12 75.9 53 66.0
Glyma.14G034600 Glycine max HOM05D007449 ORTHO05D009504 6.0e-11 71.6 64 50.0


User provided reference genes

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