Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0335721 Helianthus annuus HOM05D006447 ORTHO05D007938 1.1e-118 429.9 204 100.0
HanXRQChr10g0309891 Helianthus annuus HOM05D002027 ORTHO05D007928 3.6e-24 115.9 59 91.5
HanXRQChr10g0319031 Helianthus annuus HOM05D006447 ORTHO05D007938 7.9e-24 114.8 81 76.5
ECA234G4260 Erigeron canadensis HOM05D006447 ORTHO05D007938 1.8e-23 113.6 81 75.3
Lsat_1_v5_gn_5_146261 Lactuca sativa HOM05D006447 ORTHO05D007938 1.8e-23 113.6 81 75.3
Sed0005705 Sechium edule HOM05D006447 ORTHO05D007938 2.3e-23 113.2 81 75.3
Lalb_Chr22g0349841 Lupinus albus HOM05D006447 ORTHO05D007938 3.0e-23 112.8 81 75.3
Glyma.01G004700 Glycine max HOM05D006447 ORTHO05D007938 3.9e-23 112.5 81 74.1
CSS0014749 Camellia sinensis var. sinensis HOM05D006447 ORTHO05D007938 5.2e-23 112.1 81 74.1
Lj2g0017011 Lotus japonicus HOM05D006447 ORTHO05D007938 5.2e-23 112.1 81 72.8
PGR142G0783 Punica granatum HOM05D006447 ORTHO05D007938 6.7e-23 111.7 81 74.1
ClCG03G015910 Citrullus lanatus HOM05D006447 ORTHO05D007938 8.8e-23 111.3 87 69.0
Psat1g048880 Pisum sativum HOM05D006447 ORTHO05D007938 8.8e-23 111.3 81 72.8
CiPaw.04G153800 Carya illinoinensis HOM05D006447 ORTHO05D007938 1.1e-22 110.9 81 74.1
Eucgr.C00935 Eucalyptus grandis HOM05D006447 ORTHO05D007938 1.1e-22 110.9 81 74.1
Eucgr.C00941 Eucalyptus grandis HOM05D006447 ORTHO05D007938 1.1e-22 110.9 88 72.7
QL02p040054 Quercus lobata HOM05D006447 ORTHO05D007938 1.1e-22 110.9 81 71.6
VMungo0464G1544 Vigna mungo HOM05D006447 ORTHO05D007938 1.1e-22 110.9 81 72.8
DCAR_024680 Daucus carota HOM05D006447 ORTHO05D007938 1.5e-22 110.5 82 70.7
Lj7A670G54 Lonicera japonica HOM05D006447 ORTHO05D007938 1.5e-22 110.5 82 72.0
TPR.G26948 Trifolium pratense HOM05D006447 ORTHO05D007938 1.5e-22 110.5 81 72.8
DCAR_031970 Daucus carota HOM05D006447 ORTHO05D007938 2.6e-22 109.8 81 71.6
Medtr6g090585 Medicago truncatula HOM05D006447 ORTHO05D007938 2.6e-22 109.8 81 71.6
Os09g0280600 Oryza sativa ssp. japonica HOM05D006447 ORTHO05D007938 2.6e-22 109.8 81 72.8
THA.LOC104814578 Tarenaya hassleriana HOM05D006447 ORTHO05D007938 2.6e-22 109.8 81 71.6
MELO3C015434.2 Cucumis melo HOM05D006447 ORTHO05D007938 3.3e-22 109.4 85 70.6
Manes.03G029700 Manihot esculenta HOM05D006447 ORTHO05D007938 3.3e-22 109.4 81 71.6
Atru.BG.7.p Acer truncatum HOM05D006447 ORTHO05D007938 4.4e-22 109.0 81 72.8
A03p58760 Brassica napus HOM05D006447 ORTHO05D007938 4.4e-22 109.0 86 65.1
Ca_16628_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 4.4e-22 109.0 81 71.6
CsaV3_1G040040 Cucumis sativus L. HOM05D006447 ORTHO05D007938 4.4e-22 109.0 81 71.6
Gohir.D07G009900 Gossypium hirsutum HOM05D006447 ORTHO05D007938 4.4e-22 109.0 84 69.0
Gorai.001G010200 Gossypium raimondii HOM05D006447 ORTHO05D007938 4.4e-22 109.0 84 69.0
Thecc.09G095600 Theobroma cacao HOM05D006447 ORTHO05D007938 4.4e-22 109.0 66 84.8
TAR626G0126 Trochodendron aralioides HOM05D006447 ORTHO05D007938 4.4e-22 109.0 81 71.6
TAR626G0261 Trochodendron aralioides HOM05D006447 ORTHO05D007938 4.4e-22 109.0 81 71.6
TAR728G0001 Trochodendron aralioides HOM05D006447 ORTHO05D007938 4.4e-22 109.0 81 71.6
HPP92_025693 Vanilla planifolia HOM05D006447 ORTHO05D007938 4.4e-22 109.0 83 71.1
Gohir.A07G009600 Gossypium hirsutum HOM05D006447 ORTHO05D007938 5.7e-22 108.6 84 69.0
Phvul.004G173200 Phaseolus vulgaris HOM05D006447 ORTHO05D007938 5.7e-22 108.6 81 70.4
Potri.018G069800 Populus trichocarpa HOM05D006447 ORTHO05D007938 5.7e-22 108.6 78 75.6
arahy.Tifrunner.gnm1.ann1.2E9KT7 Arachis hypogaea HOM05D006447 ORTHO05D007938 7.4e-22 108.2 85 67.1
arahy.Tifrunner.gnm1.ann1.D97E3U Arachis hypogaea HOM05D006447 ORTHO05D007938 7.4e-22 108.2 85 67.1
BcaNung00456 Brassica carinata HOM05D006447 ORTHO05D007938 7.4e-22 108.2 97 63.9
C07p56700 Brassica napus HOM05D006447 ORTHO05D007938 7.4e-22 108.2 97 63.9
BolC7t46152H Brassica oleracea HOM05D006447 ORTHO05D007938 7.4e-22 108.2 97 63.9
COL.COLO4_18262 Corchorus olitorius HOM05D006447 ORTHO05D007938 7.4e-22 108.2 84 69.0
FvH4_1g06700 Fragaria vesca HOM05D006447 ORTHO05D007938 7.4e-22 108.2 81 70.4
FAN26G2507 Fragaria x ananassa HOM05D006447 ORTHO05D007938 7.4e-22 108.2 81 70.4
Nitab4.5_0000540g0030 Nicotiana tabacum HOM05D006447 ORTHO05D007938 7.4e-22 108.2 81 70.4
PSO063G5072 Papaver somniferum HOM05D006447 ORTHO05D007938 7.4e-22 108.2 85 67.1
RcHm_v2.0_Chr2g0092441 Rosa chinensis HOM05D006447 ORTHO05D007938 7.4e-22 108.2 81 70.4
Sabra18G0061100 Salix brachista HOM05D006447 ORTHO05D007938 7.4e-22 108.2 81 71.6
BraA03t14939Z Brassica rapa HOM05D006447 ORTHO05D007938 9.7e-22 107.8 85 67.1
CAN.G1241.6 Capsicum annuum HOM05D006447 ORTHO05D007938 9.7e-22 107.8 82 69.5
CAN.G3484.1 Capsicum annuum HOM05D006447 ORTHO05D007938 9.7e-22 107.8 82 69.5
Peaxi162Scf00498g00029 Petunia axillaris HOM05D006447 ORTHO05D007938 9.7e-22 107.8 81 70.4
unitig_749.g13512 Utricularia gibba HOM05D006447 ORTHO05D007938 9.7e-22 107.8 91 62.6
Prupe.7G215800 Prunus persica HOM05D006447 ORTHO05D007938 1.3e-21 107.5 81 70.4
Actinidia39754 Actinidia chinensis HOM05D006447 ORTHO05D007938 1.7e-21 107.1 81 70.4
AUR62030454 Chenopodium quinoa HOM05D006447 ORTHO05D007938 1.7e-21 107.1 81 69.1
Sc18g0001690 Simmondsia chinensis HOM05D006447 ORTHO05D007938 1.7e-21 107.1 81 67.9
Sc18g0001740 Simmondsia chinensis HOM05D006447 ORTHO05D007938 1.7e-21 107.1 81 67.9
PSO832G0153 Papaver somniferum HOM05D006447 ORTHO05D007938 2.2e-21 106.7 85 65.9
SalBow1G2756 Salvia bowleyana HOM05D006447 ORTHO05D007938 2.2e-21 106.7 84 69.0
SalBow1G3435 Salvia bowleyana HOM05D006447 ORTHO05D007938 2.2e-21 106.7 84 69.0
TWI34G0617 Tripterygium wilfordii HOM05D006447 ORTHO05D007938 2.2e-21 106.7 66 83.3
Aqoxy7G01349 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 2.8e-21 106.3 81 69.1
Migut.K00568 Erythranthe guttata HOM05D006447 ORTHO05D007938 2.8e-21 106.3 84 66.7
FAN19G0010 Fragaria x ananassa HOM05D006447 ORTHO05D007938 2.8e-21 106.3 66 81.8
FAN26G1122 Fragaria x ananassa HOM05D006447 ORTHO05D007938 2.8e-21 106.3 66 81.8
MD15G1201700 Malus domestica HOM05D006447 ORTHO05D007938 2.8e-21 106.3 81 69.1
ATR0705G171 Amborella trichopoda HOM05D006447 ORTHO05D007938 3.7e-21 105.9 83 66.3
EL10Ac5g12560 Beta vulgaris HOM05D006447 ORTHO05D007938 3.7e-21 105.9 81 69.1
AT4G29170 Arabidopsis thaliana HOM05D006447 ORTHO05D007938 4.8e-21 105.5 81 67.9
Sopen12g003620 Solanum pennellii HOM05D006447 ORTHO05D007938 4.8e-21 105.5 81 69.1
AagrBONN_evm.TU.Sc2ySwM_344.5016 Anthoceros agrestis HOM05D006447 ORTHO05D007938 6.3e-21 105.1 82 67.1
Haze_25859 Corylus avellana HOM05D006447 ORTHO05D007938 6.3e-21 105.1 80 71.2
Nn8g38980 Nelumbo nucifera HOM05D006447 ORTHO05D007938 8.2e-21 104.8 81 67.9
AL7G23270 Arabidopsis lyrata HOM05D006447 ORTHO05D007938 1.1e-20 104.4 81 66.7
Carub.0007s1142 Capsella rubella HOM05D006447 ORTHO05D007938 1.1e-20 104.4 81 66.7
CARHR236900 Cardamine hirsuta HOM05D006447 ORTHO05D007938 1.1e-20 104.4 81 66.7
Cpa.g.sc229.2 Carica papaya HOM05D006447 ORTHO05D007938 1.1e-20 104.4 81 67.9
Thhalv10026148m.g Eutrema salsugineum HOM05D006447 ORTHO05D007938 1.1e-20 104.4 81 66.7
Sp7g27093 Schrenkiella parvula HOM05D006447 ORTHO05D007938 1.1e-20 104.4 81 66.7
SMO133G0018 Selaginella moellendorffii HOM05D006447 ORTHO05D007938 1.1e-20 104.4 83 65.1
Zm00001eb094560 Zea mays HOM05D006447 ORTHO05D007938 1.1e-20 104.4 81 67.9
SHI02797 Sapria himalayana HOM05D006447 ORTHO05D007938 1.4e-20 104.0 78 71.8
Ciclev10009402m.g Citrus clementina HOM05D006447 ORTHO05D007938 1.8e-20 103.6 81 69.1
PGSC0003DMG400000348 Solanum tuberosum HOM05D006447 ORTHO05D007938 3.1e-20 102.8 78 71.8
Aa31LG2G21480 Aethionema arabicum HOM05D006447 ORTHO05D007938 5.3e-20 102.1 81 65.4
Cfa003143 Carpinus fangiana HOM05D006447 ORTHO05D007938 5.3e-20 102.1 83 67.5
Pp3c5_5010 Physcomitrium patens HOM05D006447 ORTHO05D007938 5.3e-20 102.1 82 64.6
SGA_v2.0_scaffold210G42077 Striga asiatica HOM05D006447 ORTHO05D007938 5.3e-20 102.1 84 64.3
MBI01_g35891_MAGBIO Magnolia biondii HOM05D006447 ORTHO05D007938 7.0e-20 101.7 83 66.3
Mapoly0019s0059 Marchantia polymorpha HOM05D006447 ORTHO05D007938 9.1e-20 101.3 66 78.8
Mapoly0063s0089 Marchantia polymorpha HOM05D006447 ORTHO05D007938 9.1e-20 101.3 66 78.8
Hund14295 Selenicereus undatus HOM05D006447 ORTHO05D007938 2.6e-19 99.8 98 59.2
Nitab4.5_0003781g0070 Nicotiana tabacum HOM05D006447 ORTHO05D007938 2.2e-18 96.7 74 67.6
Rhsim05G0029800 Rhododendron simsii HOM05D006447 ORTHO05D007938 8.5e-18 94.7 75 70.7
vmacro10828 Vaccinium macrocarpon HOM05D006447 ORTHO05D007938 5.5e-17 92.0 67 73.1
Eucgr.L02391 Eucalyptus grandis HOM05D006447 ORTHO05D007938 7.2e-17 91.7 67 73.1
Lsat_1_v5_gn_5_79360 Lactuca sativa HOM05D002027 ORTHO05D007928 7.2e-17 91.7 59 69.5
Oeu057342.1 Olea europaea HOM05D006447 ORTHO05D007938 1.6e-16 90.5 67 71.6
Ca_25608_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 2.7e-16 89.7 67 70.1
Cc06_g10870 Coffea canephora HOM05D006447 ORTHO05D007938 2.7e-16 89.7 67 68.7
BcaNung00458 Brassica carinata HOM05D006447 ORTHO05D007938 8.0e-16 88.2 67 67.2
AUR62010457 Chenopodium quinoa HOM05D006447 ORTHO05D007938 1.4e-15 87.4 67 67.2
GSVIVG01015263001 Vitis vinifera HOM05D006447 ORTHO05D007938 1.8e-15 87.0 67 67.2
CAN.G1241.4 Capsicum annuum HOM05D006447 ORTHO05D007938 8.8e-15 84.7 52 80.8
ECA234G4199 Erigeron canadensis HOM05D002027 ORTHO05D007928 6.3e-13 78.6 56 69.6
HanXRQChr01g0013891 Helianthus annuus HOM05D000618 ORTHO05D000454 1.3e-10 70.9 45 71.1
Cre06.g278850 Chlamydomonas reinhardtii HOM05D006447 ORTHO05D007938 2.5e-09 66.6 63 49.2
CDE05G0869 Ceratophyllum demersum HOM05D006447 ORTHO05D007938 3.2e-09 66.2 62 58.1
MCO03G125 Micromonas commoda HOM05D006447 ORTHO05D007938 4.2e-09 65.9 63 49.2
Lsat_1_v5_gn_1_67520 Lactuca sativa HOM05D006447 ORTHO05D007938 5.5e-09 65.5 60 63.3
CAN.G4329.1 Capsicum annuum HOM05D006447 ORTHO05D007938 5.2e-07 58.9 40 75.0
ECA232G4081 Erigeron canadensis HOM05D000618 ORTHO05D000454 5.2e-07 58.9 35 77.1
Lsat_1_v5_gn_9_61500 Lactuca sativa HOM05D000618 ORTHO05D000454 8.8e-07 58.2 34 73.5


User provided reference genes

Program Settings