Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0335201 Helianthus annuus HOM05D006002 ORTHO05D007651 9.4e-209 729.9 367 100.0
Lsat_1_v5_gn_7_116060 Lactuca sativa HOM05D006002 ORTHO05D007651 1.3e-157 560.1 368 73.9
ECA236G2913 Erigeron canadensis HOM05D006002 ORTHO05D007651 3.2e-140 502.3 370 69.7
TAR627G1081 Trochodendron aralioides HOM05D006002 ORTHO05D007651 8.1e-136 487.6 361 65.7
Rhsim04G0006400 Rhododendron simsii HOM05D006002 ORTHO05D007651 1.4e-132 476.9 362 65.5
Hma1.2p1_0193F.1_g084460 Hydrangea macrophylla HOM05D006002 ORTHO05D007651 9.3e-132 474.2 342 66.1
Hma1.2p1_0193F.1_g084470 Hydrangea macrophylla HOM05D006002 ORTHO05D007651 1.2e-131 473.8 333 67.3
vmacro09790 Vaccinium macrocarpon HOM05D006002 ORTHO05D007651 1.0e-130 470.7 360 65.8
MD10G1197800 Malus domestica HOM05D006002 ORTHO05D007651 7.4e-129 464.5 340 65.6
Actinidia37107 Actinidia chinensis HOM05D006002 ORTHO05D007651 3.1e-127 459.1 345 66.1
FAN16G0275 Fragaria x ananassa HOM05D006002 ORTHO05D007651 4.5e-126 455.3 351 65.8
Cc05_g15870 Coffea canephora HOM05D006002 ORTHO05D007651 5.8e-126 454.9 359 63.2
PGSC0003DMG400022243 Solanum tuberosum HOM05D006002 ORTHO05D007651 5.8e-126 454.9 340 65.3
Glyma.15G260100 Glycine max HOM05D006002 ORTHO05D007651 6.4e-125 451.4 340 64.1
FAN11G0453 Fragaria x ananassa HOM05D006002 ORTHO05D007651 1.1e-124 450.7 323 68.1
Prupe.4G144100 Prunus persica HOM05D006002 ORTHO05D007651 1.9e-124 449.9 342 64.6
Sopen07g034460 Solanum pennellii HOM05D006002 ORTHO05D007651 2.4e-124 449.5 340 64.1
Nn3g20175 Nelumbo nucifera HOM05D006002 ORTHO05D007651 3.2e-124 449.1 336 64.3
Manes.03G102600 Manihot esculenta HOM05D006002 ORTHO05D007651 4.2e-124 448.7 338 63.6
RcHm_v2.0_Chr5g0027061 Rosa chinensis HOM05D006002 ORTHO05D007651 5.5e-124 448.4 369 62.3
CAN.G943.23 Capsicum annuum HOM05D006002 ORTHO05D007651 7.1e-124 448.0 340 65.6
CSS0008604 Camellia sinensis var. sinensis HOM05D006002 ORTHO05D007651 9.3e-124 447.6 349 66.5
Migut.M01570 Erythranthe guttata HOM05D006002 ORTHO05D007651 2.1e-123 446.4 369 61.8
Lj3g0018048 Lotus japonicus HOM05D006002 ORTHO05D007651 3.5e-123 445.7 340 63.5
FvH4_3g16091 Fragaria vesca HOM05D006002 ORTHO05D007651 4.6e-123 445.3 370 61.9
Solyc07g066280.3 Solanum lycopersicum HOM05D006002 ORTHO05D007651 7.9e-123 444.5 340 63.2
Lj8A185G55 Lonicera japonica HOM05D006002 ORTHO05D007651 1.0e-122 444.1 325 67.7
Nitab4.5_0001235g0050 Nicotiana tabacum HOM05D006002 ORTHO05D007651 1.0e-122 444.1 342 64.3
Ciclev10020646m.g Citrus clementina HOM05D006002 ORTHO05D007651 1.8e-122 443.4 350 62.6
QL04p088541 Quercus lobata HOM05D006002 ORTHO05D007651 3.0e-122 442.6 363 59.8
Potri.003G221400 Populus trichocarpa HOM05D006002 ORTHO05D007651 6.7e-122 441.4 345 65.5
TWI53G1943 Tripterygium wilfordii HOM05D006002 ORTHO05D007651 6.7e-122 441.4 328 64.9
FAN25G3512 Fragaria x ananassa HOM05D006002 ORTHO05D007651 8.7e-122 441.0 348 64.4
Eucgr.F01438 Eucalyptus grandis HOM05D006002 ORTHO05D007651 1.5e-121 440.3 328 64.0
CANSAT56G1259 Cannabis sativa HOM05D006002 ORTHO05D007651 4.3e-121 438.7 342 63.5
Ah.04g163380 Amaranthus hybridus HOM05D006002 ORTHO05D007651 7.4e-121 438.0 341 62.5
Psat3g026200 Pisum sativum HOM05D006002 ORTHO05D007651 7.4e-121 438.0 359 61.6
Ca_09098_v3 Cicer arietinum L. HOM05D006002 ORTHO05D007651 9.6e-121 437.6 356 61.8
Medtr7g107330 Medicago truncatula HOM05D006002 ORTHO05D007651 1.6e-120 436.8 352 61.6
Glyma.08G167200 Glycine max HOM05D006002 ORTHO05D007651 2.1e-120 436.4 341 63.9
Sc03g0007860 Simmondsia chinensis HOM05D006002 ORTHO05D007651 8.2e-120 434.5 344 63.1
Nitab4.5_0000294g0110 Nicotiana tabacum HOM05D006002 ORTHO05D007651 1.1e-119 434.1 342 63.2
Peaxi162Scf00232g00102 Petunia axillaris HOM05D006002 ORTHO05D007651 3.1e-119 432.6 340 61.2
arahy.Tifrunner.gnm1.ann1.0RH0I3 Arachis hypogaea HOM05D006002 ORTHO05D007651 4.0e-119 432.2 346 64.2
MSTRG.16122 Avicennia marina HOM05D006002 ORTHO05D007651 1.2e-118 430.6 370 58.1
COL.COLO4_25103 Corchorus olitorius HOM05D006002 ORTHO05D007651 1.5e-118 430.3 354 61.0
arahy.Tifrunner.gnm1.ann1.HWL53Q Arachis hypogaea HOM05D006002 ORTHO05D007651 2.0e-118 429.9 346 63.3
Phvul.005G050900 Phaseolus vulgaris HOM05D006002 ORTHO05D007651 3.8e-117 425.6 341 62.2
PSO675G3741 Papaver somniferum HOM05D006002 ORTHO05D007651 6.5e-117 424.9 341 61.3
unitig_748.g7639 Utricularia gibba HOM05D006002 ORTHO05D007651 6.5e-117 424.9 346 60.7
PGR083G2675 Punica granatum HOM05D006002 ORTHO05D007651 4.2e-116 422.2 369 59.1
CsaV3_2G022200 Cucumis sativus L. HOM05D006002 ORTHO05D007651 7.1e-116 421.4 343 59.5
MBI02_g43301_MAGBIO Magnolia biondii HOM05D006002 ORTHO05D007651 4.6e-115 418.7 352 59.7
PSO541G1619 Papaver somniferum HOM05D006002 ORTHO05D007651 1.3e-114 417.2 341 60.7
THA.LOC104819332 Tarenaya hassleriana HOM05D006002 ORTHO05D007651 1.3e-114 417.2 370 58.9
ClCG11G016270 Citrullus lanatus HOM05D006002 ORTHO05D007651 2.3e-114 416.4 341 59.2
Sabra03G0164800 Salix brachista HOM05D006002 ORTHO05D007651 2.3e-114 416.4 333 64.0
Eucgr.F01442 Eucalyptus grandis HOM05D006002 ORTHO05D007651 3.9e-114 415.6 312 63.5
SGA_v2.0_scaffold7G03564 Striga asiatica HOM05D006002 ORTHO05D007651 1.1e-113 414.1 331 61.6
SalBow8G1862 Salvia bowleyana HOM05D006002 ORTHO05D007651 2.5e-113 412.9 340 62.1
Aqoxy1G01586 Aquilegia oxysepala HOM05D006002 ORTHO05D007651 1.3e-112 410.6 346 59.2
Sed0002243 Sechium edule HOM05D006002 ORTHO05D007651 2.1e-112 409.8 370 56.8
VMungo1080G0998 Vigna mungo HOM05D001395 ORTHO05D002039 2.1e-112 409.8 332 60.8
Gohir.A05G076100 Gossypium hirsutum HOM05D006002 ORTHO05D007651 2.8e-112 409.5 357 58.8
Gorai.009G080200 Gossypium raimondii HOM05D006002 ORTHO05D007651 1.1e-111 407.5 357 58.5
Hund02296 Selenicereus undatus HOM05D006002 ORTHO05D007651 1.4e-111 407.1 392 55.4
BolC3t18471H Brassica oleracea HOM05D006002 ORTHO05D007651 1.3e-109 400.6 374 59.4
Thhalv10004403m.g Eutrema salsugineum HOM05D006002 ORTHO05D007651 2.2e-109 399.8 337 59.9
AL8G41420 Arabidopsis lyrata HOM05D006002 ORTHO05D007651 3.8e-109 399.1 347 60.5
Thecc.03G324000 Theobroma cacao HOM05D006002 ORTHO05D007651 3.8e-109 399.1 350 58.6
CDE02G2905 Ceratophyllum demersum HOM05D006002 ORTHO05D007651 6.5e-109 398.3 347 56.2
Haze_07820 Corylus avellana HOM05D006002 ORTHO05D007651 1.9e-108 396.7 304 62.2
BcaC01g02672 Brassica carinata HOM05D006002 ORTHO05D007651 3.2e-108 396.0 373 59.0
A06p30870 Brassica napus HOM05D006002 ORTHO05D007651 7.2e-108 394.8 368 57.1
Duzib168G0541 Durio zibethinus HOM05D006002 ORTHO05D007651 7.2e-108 394.8 354 57.6
Sp2g27210 Schrenkiella parvula HOM05D006002 ORTHO05D007651 1.6e-107 393.7 367 57.8
Aa31LG1G17780 Aethionema arabicum HOM05D006002 ORTHO05D007651 2.1e-107 393.3 366 55.7
Carub.0008s2494 Capsella rubella HOM05D006002 ORTHO05D007651 4.6e-107 392.1 329 61.1
AT5G64150 Arabidopsis thaliana HOM05D006002 ORTHO05D007651 6.1e-107 391.7 369 57.7
CiPaw.11G062100 Carya illinoinensis HOM05D006002 ORTHO05D007651 7.9e-107 391.3 343 57.7
CARHR278060 Cardamine hirsuta HOM05D006002 ORTHO05D007651 1.8e-106 390.2 366 56.8
Lalb_Chr25g0284701 Lupinus albus HOM05D006002 ORTHO05D007651 6.7e-106 388.3 281 65.8
EL10Ac4g08518 Beta vulgaris HOM05D006002 ORTHO05D007651 2.5e-105 386.3 367 53.4
BcaB02g09782 Brassica carinata HOM05D006002 ORTHO05D007651 3.3e-105 386.0 369 56.6
BraA06t26026Z Brassica rapa HOM05D006002 ORTHO05D007651 4.3e-105 385.6 362 56.9
C03p62100 Brassica napus HOM05D006002 ORTHO05D007651 5.7e-105 385.2 368 58.4
QL04p088993 Quercus lobata HOM05D006002 ORTHO05D007651 5.7e-105 385.2 289 63.0
MELO3C010553.2 Cucumis melo HOM05D006002 ORTHO05D007651 1.2e-102 377.5 305 61.3
GSVIVG01020461001 Vitis vinifera HOM05D006002 ORTHO05D007651 2.6e-102 376.3 246 72.4
Gohir.D05G078800 Gossypium hirsutum HOM05D006002 ORTHO05D007651 2.2e-101 373.2 327 59.0
HPP92_001894 Vanilla planifolia HOM05D006002 ORTHO05D004222 5.0e-101 372.1 333 58.9
Gohir.1Z049302 Gossypium hirsutum HOM05D006002 ORTHO05D007651 8.5e-101 371.3 348 56.6
MBI02_g20986_MAGBIO Magnolia biondii HOM05D006002 ORTHO05D007651 1.9e-100 370.2 380 53.9
Dinv42524 Davidia involucrata HOM05D006002 ORTHO05D007651 3.2e-100 369.4 364 54.7
ATR0165G036 Amborella trichopoda HOM05D006002 ORTHO05D007651 9.1e-95 351.3 249 65.1
QL03p043202 Quercus lobata HOM05D006002 ORTHO05D007651 9.7e-89 331.3 258 62.4
SEGI_37419 Sequoiadendron giganteum HOM05D006002 ORTHO05D007651 1.2e-86 324.3 279 56.3
Os12g0612500 Oryza sativa ssp. japonica HOM05D006002 ORTHO05D007651 2.6e-86 323.2 367 49.0
SMO145G0236 Selaginella moellendorffii HOM05D006002 ORTHO05D007651 2.2e-77 293.5 328 47.3
Atru.chr2.1886 Acer truncatum HOM05D006002 ORTHO05D007651 5.0e-77 292.4 232 61.2
MD05G1214000 Malus domestica HOM05D006002 ORTHO05D007651 5.5e-76 288.9 248 58.1
Pp3c1_22930 Physcomitrium patens HOM05D006002 ORTHO05D007651 5.7e-73 278.9 467 36.6
AagrBONN_evm.TU.Sc2ySwM_344.4971 Anthoceros agrestis HOM05D006002 ORTHO05D007651 3.7e-72 276.2 321 48.0
Mapoly0051s0043 Marchantia polymorpha HOM05D006002 ORTHO05D007651 6.3e-72 275.4 443 38.4
Potri.018G000850 Populus trichocarpa HOM05D006002 ORTHO05D007651 1.1e-71 274.6 310 52.3
AUR62041934 Chenopodium quinoa HOM05D006002 ORTHO05D007651 9.1e-71 271.6 328 50.6
AUR62035491 Chenopodium quinoa HOM05D006002 ORTHO05D007651 2.0e-70 270.4 328 50.9
Cfa022974 Carpinus fangiana HOM05D006002 ORTHO05D007651 5.0e-69 265.8 215 60.5
Oeu052016.1 Olea europaea HOM05D006002 ORTHO05D007651 5.5e-68 262.3 224 59.8
Actinidia35439 Actinidia chinensis HOM05D006002 ORTHO05D007651 2.0e-62 243.8 211 62.1
Cpa.g.sc42.79 Carica papaya HOM05D006002 ORTHO05D007651 1.5e-60 237.7 210 58.6
TPR.G32276 Trifolium pratense HOM05D006002 ORTHO05D007651 4.0e-58 229.6 353 39.9
CBR_g8978 Chara braunii HOM05D006002 ORTHO05D007651 1.2e-57 228.0 221 51.1
MCO01G477 Micromonas commoda HOM05D006002 ORTHO05D007651 6.4e-48 195.7 412 35.2
TPR.G18376 Trifolium pratense HOM05D006002 ORTHO05D007651 1.4e-47 194.5 158 60.1
Cpa.g.sc42.82 Carica papaya HOM05D006002 ORTHO05D007651 1.1e-44 184.9 124 66.9
Potri.001G003632 Populus trichocarpa HOM05D006002 ORTHO05D007651 1.5e-44 184.5 151 62.3
Cre07.g337516 Chlamydomonas reinhardtii HOM05D006002 ORTHO05D007651 1.4e-42 177.9 320 36.9
QL04p062372 Quercus lobata HOM05D006002 ORTHO05D007651 2.3e-42 177.2 120 69.2
Zm00001eb031660 Zea mays HOM05D006002 ORTHO05D007651 4.6e-38 162.9 125 58.4
QL04p088694 Quercus lobata HOM05D006002 ORTHO05D007651 1.3e-37 161.4 170 50.6
MD05G1214300 Malus domestica HOM05D006002 ORTHO05D007651 1.9e-36 157.5 112 73.2
PRCOL_00003514 Prasinoderma coloniale HOM05D006002 ORTHO05D007651 4.3e-36 156.4 354 33.1
SEGI_15629 Sequoiadendron giganteum HOM05D006002 ORTHO05D007651 9.5e-36 155.2 123 57.7
COL.COLO4_30126 Corchorus olitorius HOM05D006002 ORTHO05D007651 2.8e-27 127.1 85 67.1
QL04p089617 Quercus lobata HOM05D002182 ORTHO05D004671 5.8e-25 119.4 126 54.0
BcaB04g17517 Brassica carinata HOM05D006002 ORTHO05D007651 1.4e-23 114.8 91 59.3
QL03p043192 Quercus lobata HOM05D006002 ORTHO05D007651 2.8e-19 100.5 63 76.2
QL04p089868 Quercus lobata HOM05D006002 ORTHO05D007651 6.9e-18 95.9 68 69.1
Cfa023409 Carpinus fangiana HOM05D006002 ORTHO05D126491 4.9e-08 63.2 180 30.6
CAN.G548.23 Capsicum annuum HOM05D006002 ORTHO05D007651 1.9e-07 61.2 119 31.9
RcHm_v2.0_Chr5g0022101 Rosa chinensis HOM05D006345 ORTHO05D007428 2.4e-07 60.8 158 29.7
FvH4_3g13390 Fragaria vesca HOM05D006345 ORTHO05D007428 5.5e-07 59.7 158 29.1
FAN11G3812 Fragaria x ananassa HOM05D006345 ORTHO05D007428 5.5e-07 59.7 158 29.1
FAN21G0075 Fragaria x ananassa HOM05D006345 ORTHO05D007428 5.5e-07 59.7 158 29.1
Medtr4g024860 Medicago truncatula HOM05D000001 ORTHO05D000003 7.1e-07 59.3 157 27.4
FAN16G3736 Fragaria x ananassa HOM05D006345 ORTHO05D007428 9.3e-07 58.9 158 29.1
Prupe.4G121300 Prunus persica HOM05D006345 ORTHO05D007428 1.6e-06 58.2 158 29.1
CAN.G42.13 Capsicum annuum HOM05D006002 ORTHO05D007651 6.0e-06 56.2 54 53.7
FAN25G2350 Fragaria x ananassa HOM05D006345 ORTHO05D007428 6.0e-06 56.2 158 28.5


User provided reference genes

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