Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0334411 Helianthus annuus HOM05D007278 ORTHO05D009280 8.2e-283 976.5 524 100.0
ECA236G2022 Erigeron canadensis HOM05D007278 ORTHO05D009280 5.0e-147 525.4 517 60.3
Lsat_1_v5_gn_7_114160 Lactuca sativa HOM05D007278 ORTHO05D009280 2.0e-140 503.4 511 58.7
GSVIVG01014732001 Vitis vinifera HOM05D007278 ORTHO05D009280 6.2e-121 438.7 546 49.6
Hma1.2p1_1094F.1_g256380 Hydrangea macrophylla HOM05D007278 ORTHO05D009280 7.8e-116 421.8 519 51.3
Lj8A180T100 Lonicera japonica HOM05D007278 ORTHO05D009280 5.1e-115 419.1 543 49.0
Actinidia03626 Actinidia chinensis HOM05D007278 ORTHO05D009280 7.3e-114 415.2 526 47.9
Rhsim04G0010900 Rhododendron simsii HOM05D007278 ORTHO05D009280 1.1e-112 411.4 533 47.3
Haze_09857 Corylus avellana HOM05D007278 ORTHO05D009280 2.4e-109 400.2 545 47.5
Cfa016926 Carpinus fangiana HOM05D007278 ORTHO05D009280 4.1e-109 399.4 542 46.7
MD11G1036100 Malus domestica HOM05D007278 ORTHO05D009280 5.4e-109 399.1 512 48.6
TAR626G0410 Trochodendron aralioides HOM05D007278 ORTHO05D009280 1.6e-108 397.5 529 46.9
CSS0042987 Camellia sinensis var. sinensis HOM05D007278 ORTHO05D009280 6.0e-108 395.6 527 48.0
vmacro09628 Vaccinium macrocarpon HOM05D007278 ORTHO05D009280 5.1e-107 392.5 527 46.9
Atru.chr2.3762 Acer truncatum HOM05D007278 ORTHO05D009280 1.9e-106 390.6 519 47.6
TWI38G0395 Tripterygium wilfordii HOM05D007278 ORTHO05D009280 7.3e-106 388.7 514 46.9
Ciclev10010817m.g Citrus clementina HOM05D007278 ORTHO05D009280 9.6e-106 388.3 507 46.9
FvH4_3g42411 Fragaria vesca HOM05D007278 ORTHO05D009280 1.6e-105 387.5 511 48.7
FAN11G3173 Fragaria x ananassa HOM05D007278 ORTHO05D009280 5.2e-104 382.5 511 48.3
FAN28G1934 Fragaria x ananassa HOM05D007278 ORTHO05D009280 5.2e-104 382.5 509 47.9
Atru.chr2.3748 Acer truncatum HOM05D007278 ORTHO05D009280 1.5e-103 380.9 517 47.4
Gohir.D13G134500 Gossypium hirsutum HOM05D007278 ORTHO05D009280 1.5e-103 380.9 528 46.0
Gorai.013G150800 Gossypium raimondii HOM05D007278 ORTHO05D009280 2.6e-103 380.2 528 45.8
FAN21G2048 Fragaria x ananassa HOM05D007278 ORTHO05D009280 2.9e-102 376.7 509 47.7
Duzib213G0397 Durio zibethinus HOM05D007278 ORTHO05D009280 4.9e-102 375.9 535 43.7
Gohir.A13G131200 Gossypium hirsutum HOM05D007278 ORTHO05D009280 6.4e-102 375.6 529 45.6
Solyc07g065760.3 Solanum lycopersicum HOM05D007278 ORTHO05D009280 9.3e-101 371.7 522 45.0
Sabra16G0243500 Salix brachista HOM05D007278 ORTHO05D009280 1.6e-100 370.9 523 45.5
Sopen07g033970 Solanum pennellii HOM05D007278 ORTHO05D009280 2.7e-100 370.2 530 45.1
Potri.001G370700 Populus trichocarpa HOM05D007278 ORTHO05D009280 1.1e-98 364.8 516 45.7
PGSC0003DMG400022161 Solanum tuberosum HOM05D007278 ORTHO05D009280 2.5e-98 363.6 526 44.1
SalBow8G0318 Salvia bowleyana HOM05D007278 ORTHO05D009280 2.8e-97 360.1 511 45.2
ClCG10G004340 Citrullus lanatus HOM05D007278 ORTHO05D009280 3.6e-97 359.8 516 45.7
SalBow8G0571 Salvia bowleyana HOM05D007278 ORTHO05D009280 3.6e-97 359.8 511 45.2
Nn7g37466 Nelumbo nucifera HOM05D007278 ORTHO05D009280 1.2e-95 354.8 549 42.3
Migut.M01628 Erythranthe guttata HOM05D007278 ORTHO05D009280 1.5e-95 354.4 512 43.9
FAN16G1801 Fragaria x ananassa HOM05D007278 ORTHO05D009280 3.4e-95 353.2 511 45.8
Nitab4.5_0010643g0030 Nicotiana tabacum HOM05D007278 ORTHO05D009280 5.8e-95 352.4 520 43.7
Oeu005473.1 Olea europaea HOM05D007278 ORTHO05D009280 2.2e-94 350.5 513 44.6
ATR0751G235 Amborella trichopoda HOM05D007278 ORTHO05D009280 4.9e-94 349.4 549 40.8
Nitab4.5_0000152g0330 Nicotiana tabacum HOM05D007278 ORTHO05D009280 8.4e-94 348.6 527 43.8
COL.COLO4_07734 Corchorus olitorius HOM05D007278 ORTHO05D009280 1.9e-93 347.4 524 44.5
Thecc.07G008600 Theobroma cacao HOM05D007278 ORTHO05D009280 1.9e-93 347.4 505 45.0
MELO3C014108.2 Cucumis melo HOM05D007278 ORTHO05D009280 2.1e-92 344.0 529 42.0
Peaxi162Scf00139g00103 Petunia axillaris HOM05D007278 ORTHO05D009280 2.1e-92 344.0 520 44.8
RcHm_v2.0_Chr5g0075911 Rosa chinensis HOM05D007278 ORTHO05D009280 2.7e-92 343.6 512 45.1
Cc05_g15160 Coffea canephora HOM05D007278 ORTHO05D009280 1.5e-90 337.8 511 43.2
EL10Ac4g07533 Beta vulgaris HOM05D007278 ORTHO05D009280 5.6e-90 335.9 523 41.7
PSO210G1309 Papaver somniferum HOM05D007278 ORTHO05D009280 4.8e-89 332.8 517 41.4
PGR031G2600 Punica granatum HOM05D007278 ORTHO05D009280 1.4e-88 331.3 509 43.2
THA.LOC104822724 Tarenaya hassleriana HOM05D007278 ORTHO05D009280 1.4e-88 331.3 522 41.8
AL1G63950 Arabidopsis lyrata HOM05D007278 ORTHO05D009280 1.8e-88 330.9 518 43.2
AT1G55830 Arabidopsis thaliana HOM05D007278 ORTHO05D009280 9.0e-88 328.6 508 41.7
Aa31LG10G360 Aethionema arabicum HOM05D007278 ORTHO05D009280 1.7e-86 324.3 518 42.1
Dinv10356 Davidia involucrata HOM05D007278 ORTHO05D009280 8.4e-86 322.0 457 45.7
Sed0005179 Sechium edule HOM05D007278 ORTHO05D009280 4.2e-85 319.7 545 40.6
CANSAT11G0150 Cannabis sativa HOM05D007278 ORTHO05D009280 7.1e-85 318.9 510 41.8
Sp1g41410 Schrenkiella parvula HOM05D007278 ORTHO05D009280 5.6e-82 309.3 517 40.4
QL08p003254 Quercus lobata HOM05D007278 ORTHO05D009280 2.1e-81 307.4 443 46.3
BcaB07g33186 Brassica carinata HOM05D007278 ORTHO05D009280 3.1e-80 303.5 515 40.8
Prupe.6G026900 Prunus persica HOM05D007278 ORTHO05D009280 2.9e-78 297.0 427 47.3
Manes.15G057600 Manihot esculenta HOM05D007278 ORTHO05D009280 5.5e-77 292.7 432 43.8
C06p10730 Brassica napus HOM05D007278 ORTHO05D009280 1.2e-76 291.6 511 40.5
BcaC08g43656 Brassica carinata HOM05D007278 ORTHO05D009280 2.1e-76 290.8 508 40.6
Cpa.g.sc12.134 Carica papaya HOM05D007278 ORTHO05D009280 1.0e-75 288.5 518 38.0
CiPaw.11G206100 Carya illinoinensis HOM05D007278 ORTHO05D009280 1.9e-74 284.3 469 44.1
AUR62035670 Chenopodium quinoa HOM05D007278 ORTHO05D009280 8.2e-73 278.9 471 41.8
BolC6t36159H Brassica oleracea HOM05D007278 ORTHO05D009280 3.1e-72 276.9 498 39.8
SEGI_11808 Sequoiadendron giganteum HOM05D007278 ORTHO05D009280 6.9e-72 275.8 595 33.8
CDE10G0141 Ceratophyllum demersum HOM05D007278 ORTHO05D009280 2.6e-71 273.9 512 38.7
CAN.G623.31 Capsicum annuum HOM05D007278 ORTHO05D009280 7.6e-71 272.3 436 41.7
BraSC56t46403Z Brassica rapa HOM05D007278 ORTHO05D009280 5.0e-70 269.6 513 38.4
AUR62017137 Chenopodium quinoa HOM05D007278 ORTHO05D009280 4.3e-66 256.5 469 40.3
MD03G1032400 Malus domestica HOM05D007278 ORTHO05D009280 4.1e-64 250.0 255 55.3
CsaV3_3G004120 Cucumis sativus L. HOM05D007278 ORTHO05D009280 1.0e-59 235.3 260 50.8
Lj6g0007693 Lotus japonicus HOM05D007278 ORTHO05D009280 1.4e-59 235.0 265 49.8
Eucgr.F03677 Eucalyptus grandis HOM05D007278 ORTHO05D009280 2.3e-59 234.2 265 51.7
Carub.0001s4440 Capsella rubella HOM05D007278 ORTHO05D009280 8.8e-59 232.3 425 37.9
CARHR045530 Cardamine hirsuta HOM05D007278 ORTHO05D009280 1.4e-56 224.9 424 39.4
HPP92_028502 Vanilla planifolia HOM05D007278 ORTHO05D009280 1.8e-56 224.6 441 35.6
Aqoxy1G02222 Aquilegia oxysepala HOM05D007278 ORTHO05D009280 3.1e-56 223.8 299 45.8
Thhalv10011545m.g Eutrema salsugineum HOM05D007278 ORTHO05D009280 3.1e-56 223.8 420 39.8
Hund23054 Selenicereus undatus HOM05D007278 ORTHO05D000105 5.3e-56 223.0 339 43.1
Phvul.006G059206 Phaseolus vulgaris HOM05D007278 ORTHO05D009280 1.2e-55 221.9 264 47.3
TPR.G17958 Trifolium pratense HOM05D007278 ORTHO05D009280 1.0e-54 218.8 264 47.3
Ca_12446_v3 Cicer arietinum L. HOM05D007278 ORTHO05D009280 3.2e-53 213.8 341 40.8
AagrBONN_evm.TU.Sc2ySwM_344.4166 Anthoceros agrestis HOM05D007278 ORTHO05D009280 2.1e-52 211.1 606 29.7
Lalb_Chr20g0114071 Lupinus albus HOM05D007278 ORTHO05D009280 2.7e-52 210.7 310 43.9
VMungo0540G0529 Vigna mungo HOM05D007278 ORTHO05D009280 2.7e-52 210.7 337 39.8
Ca_14732_v3 Cicer arietinum L. HOM05D007278 ORTHO05D009280 8.0e-52 209.1 243 49.4
Glyma.18G074900 Glycine max HOM05D007278 ORTHO05D009280 6.7e-51 206.1 319 41.4
Pp3c7_290 Physcomitrium patens HOM05D007278 ORTHO05D009280 1.1e-50 205.3 591 30.1
MD03G1032000 Malus domestica HOM05D007278 ORTHO05D009280 1.9e-45 188.0 147 68.7
arahy.Tifrunner.gnm1.ann1.BC78PS Arachis hypogaea HOM05D007278 ORTHO05D009280 9.4e-37 159.1 318 33.3
Mapoly0076s0093 Marchantia polymorpha HOM05D007278 ORTHO05D009280 8.0e-36 156.0 244 37.7
arahy.Tifrunner.gnm1.ann1.E9ZV4R Arachis hypogaea HOM05D007278 ORTHO05D009280 1.4e-35 155.2 318 32.7
Psat5g165280 Pisum sativum HOM05D007278 ORTHO05D009280 3.8e-30 137.1 336 31.2
HPP92_017877 Vanilla planifolia HOM05D007278 ORTHO05D009280 2.3e-27 127.9 117 54.7
Ah.09g234860 Amaranthus hybridus HOM05D007278 ORTHO05D009280 1.0e-22 112.5 376 29.5
QL08p003251 Quercus lobata HOM05D007278 ORTHO05D009280 5.6e-21 106.7 87 59.8
SEGI_34890 Sequoiadendron giganteum HOM05D007278 ORTHO05D009280 3.0e-19 100.9 159 37.7
Hma1.2p1_0604F.1_g187790 Hydrangea macrophylla HOM05D007278 ORTHO05D009280 3.3e-13 80.9 80 50.0
Hma1.2p1_0292F.1_g115510 Hydrangea macrophylla HOM05D007278 ORTHO05D009280 8.9e-11 72.8 66 53.0
Thecc.07G008800 Theobroma cacao HOM05D007278 ORTHO05D009280 2.1e-07 61.6 87 52.9
HPP92_017878 Vanilla planifolia HOM05D007278 ORTHO05D009280 1.7e-06 58.5 54 55.6
BraA06t23216Z Brassica rapa HOM05D007278 ORTHO05D009280 6.6e-06 56.6 146 37.0


User provided reference genes

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