Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0333971 Helianthus annuus HOM05D007725 ORTHO05D009774 2.5e-206 722.2 463 100.0
CSS0027076 Camellia sinensis var. sinensis HOM05D007725 ORTHO05D009774 2.9e-82 310.1 458 55.2
Peaxi162Scf00955g00014 Petunia axillaris HOM05D007725 ORTHO05D009774 1.2e-78 298.1 460 56.3
Lj1P886T16 Lonicera japonica HOM05D007725 ORTHO05D009774 6.3e-77 292.4 454 56.2
DCAR_022605 Daucus carota HOM05D007725 ORTHO05D009774 2.7e-75 287.0 443 55.1
Nitab4.5_0002517g0030 Nicotiana tabacum HOM05D007725 ORTHO05D009774 1.3e-74 284.6 458 53.9
Sopen12g007550 Solanum pennellii HOM05D007725 ORTHO05D009774 1.9e-73 280.8 457 54.0
PGSC0003DMG402029798 Solanum tuberosum HOM05D007725 ORTHO05D009774 8.0e-72 275.4 457 54.0
Solyc12g015650.3 Solanum lycopersicum HOM05D007725 ORTHO05D009774 5.2e-71 272.7 457 53.4
Duzib170G0716 Durio zibethinus HOM05D007725 ORTHO05D009774 4.8e-69 266.2 452 52.9
Gohir.D11G287700 Gossypium hirsutum HOM05D007725 ORTHO05D009774 9.1e-68 261.9 452 46.7
Nn1g07446 Nelumbo nucifera HOM05D007725 ORTHO05D009774 3.2e-65 253.4 463 51.4
Glyma.08G326100 Glycine max HOM05D007725 ORTHO05D009774 7.2e-65 252.3 461 49.9
VMungo0540G1375 Vigna mungo HOM05D007725 ORTHO05D009774 7.2e-65 252.3 459 49.0
GSVIVG01037783001 Vitis vinifera HOM05D007725 ORTHO05D009774 7.2e-65 252.3 455 52.3
Nn1g03245 Nelumbo nucifera HOM05D007725 ORTHO05D009774 2.8e-64 250.4 460 49.6
Gohir.A11G277300 Gossypium hirsutum HOM05D007725 ORTHO05D009774 1.0e-63 248.4 452 46.2
Gorai.007G311000 Gossypium raimondii HOM05D007725 ORTHO05D009774 2.3e-63 247.3 452 42.7
COL.COLO4_09791 Corchorus olitorius HOM05D007725 ORTHO05D009774 1.5e-62 244.6 458 50.0
Ciclev10008214m.g Citrus clementina HOM05D007725 ORTHO05D009774 3.1e-60 236.9 459 50.1
Medtr3g056580 Medicago truncatula HOM05D007725 ORTHO05D009774 1.7e-58 231.1 452 38.7
Nitab4.5_0000163g0300 Nicotiana tabacum HOM05D007725 ORTHO05D009774 1.7e-58 231.1 458 50.0
MSTRG.15782 Avicennia marina HOM05D007725 ORTHO05D009774 2.3e-58 230.7 459 49.5
HanXRQChr06g0184751 Helianthus annuus HOM05D007725 ORTHO05D009774 2.5e-57 227.3 155 81.3
ClCG09G021110 Citrullus lanatus HOM05D007725 ORTHO05D009774 9.5e-57 225.3 460 48.3
TPR.G1953 Trifolium pratense HOM05D007725 ORTHO05D009774 1.2e-56 224.9 461 32.5
Dinv10315 Davidia involucrata HOM05D007725 ORTHO05D009774 3.6e-56 223.4 442 51.8
Cfa020227 Carpinus fangiana HOM05D007725 ORTHO05D009774 8.9e-55 218.8 472 45.8
Cc05_g14730 Coffea canephora HOM05D007725 ORTHO05D009774 8.9e-55 218.8 459 47.3
SGA_v2.0_scaffold168G38532 Striga asiatica HOM05D007725 ORTHO05D009774 8.9e-55 218.8 455 34.1
GSVIVG01037784001 Vitis vinifera HOM05D007725 ORTHO05D009774 1.2e-54 218.4 463 48.6
Hma1.2p1_2796F.1_g328670 Hydrangea macrophylla HOM05D007725 ORTHO05D009774 2.2e-53 214.2 463 48.2
PGR031G2940 Punica granatum HOM05D007725 ORTHO05D009774 2.0e-51 207.6 462 45.0
Migut.M01753 Erythranthe guttata HOM05D007725 ORTHO05D009774 3.5e-51 206.8 453 49.0
Psat5g175640 Pisum sativum HOM05D007725 ORTHO05D009774 5.6e-49 199.5 344 55.2
TAR624G0507 Trochodendron aralioides HOM05D007725 ORTHO05D009774 2.1e-48 197.6 341 57.5
arahy.Tifrunner.gnm1.ann1.TWJV4J Arachis hypogaea HOM05D007725 ORTHO05D009774 2.3e-47 194.1 466 44.0
Haze_09790 Corylus avellana HOM05D007725 ORTHO05D009774 3.1e-47 193.7 469 44.1
MELO3C024908.2 Cucumis melo HOM05D007725 ORTHO05D009774 2.0e-46 191.0 437 46.2
arahy.Tifrunner.gnm1.ann1.LCTM2T Arachis hypogaea HOM05D007725 ORTHO05D009774 3.4e-46 190.3 466 44.0
Nn1g03425 Nelumbo nucifera HOM05D007725 ORTHO05D009774 3.4e-46 190.3 341 57.5
PSO478G1598 Papaver somniferum HOM05D007725 ORTHO05D009774 3.4e-46 190.3 463 45.6
arahy.Tifrunner.gnm1.ann1.Q8DMES Arachis hypogaea HOM05D007725 ORTHO05D009774 5.8e-46 189.5 457 46.2
CsaV3_7G018510 Cucumis sativus L. HOM05D007725 ORTHO05D009774 7.5e-46 189.1 455 45.7
QL08p005480 Quercus lobata HOM05D007725 ORTHO05D009774 9.8e-46 188.7 458 44.5
A05p28800 Brassica napus HOM05D007725 ORTHO05D009774 3.7e-45 186.8 467 45.4
Ca_26464_v3 Cicer arietinum L. HOM05D007725 ORTHO05D009774 3.7e-45 186.8 456 36.2
Cpa.g.sc12.189 Carica papaya HOM05D007725 ORTHO05D009774 4.9e-45 186.4 458 41.7
AT3G20170 Arabidopsis thaliana HOM05D007725 ORTHO05D009774 6.4e-45 186.0 459 45.1
AL3G33870 Arabidopsis lyrata HOM05D007725 ORTHO05D009774 1.1e-44 185.3 462 42.9
Sed0002917 Sechium edule HOM05D007725 ORTHO05D009774 4.1e-44 183.3 453 45.0
C05p44210 Brassica napus HOM05D007725 ORTHO05D009774 5.4e-44 183.0 467 44.8
BolC5t33143H Brassica oleracea HOM05D007725 ORTHO05D009774 5.4e-44 183.0 467 44.8
CARHR095760 Cardamine hirsuta HOM05D007725 ORTHO05D009774 7.0e-44 182.6 463 43.2
Carub.0003s2010 Capsella rubella HOM05D007725 ORTHO05D009774 2.3e-42 177.6 465 44.1
Phvul.006G053700 Phaseolus vulgaris HOM05D007725 ORTHO05D009774 2.3e-42 177.6 360 51.7
BolC3t17381H Brassica oleracea HOM05D007725 ORTHO05D009774 6.6e-42 176.0 459 44.4
BcaB04g19094 Brassica carinata HOM05D007725 ORTHO05D009774 2.5e-41 174.1 459 45.1
COL.COLO4_09793 Corchorus olitorius HOM05D007725 ORTHO05D009774 2.5e-41 174.1 189 48.1
Thhalv10020642m.g Eutrema salsugineum HOM05D007725 ORTHO05D009774 2.5e-41 174.1 464 44.2
C03p50970 Brassica napus HOM05D007725 ORTHO05D009774 3.3e-41 173.7 459 43.8
SalBow8G2031 Salvia bowleyana HOM05D007725 ORTHO05D009774 4.3e-41 173.3 433 48.7
Sp3g18200 Schrenkiella parvula HOM05D007725 ORTHO05D009774 1.6e-40 171.4 463 43.4
Aa31LG8G7000 Aethionema arabicum HOM05D007725 ORTHO05D009774 1.8e-39 167.9 465 43.4
EL10Ac4g07611 Beta vulgaris HOM05D007725 ORTHO05D009774 1.8e-39 167.9 341 54.3
A03p41610 Brassica napus HOM05D007725 ORTHO05D009774 1.8e-39 167.9 459 43.6
BraA03t13314Z Brassica rapa HOM05D007725 ORTHO05D009774 1.8e-39 167.9 459 43.6
Oeu005490.1 Olea europaea HOM05D007725 ORTHO05D009774 1.8e-39 167.9 206 47.6
Manes.03G138100 Manihot esculenta HOM05D007725 ORTHO05D009774 9.8e-38 162.2 458 44.1
Lj6g0024671 Lotus japonicus HOM05D007725 ORTHO05D009774 2.2e-37 161.0 454 41.6
Lj6g0016094 Lotus japonicus HOM05D007725 ORTHO05D009774 3.7e-37 160.2 457 41.8
SEGI_22467 Sequoiadendron giganteum HOM05D007725 ORTHO05D009774 2.1e-35 154.5 345 50.4
ATR1149G149 Amborella trichopoda HOM05D007725 ORTHO05D009774 6.2e-32 142.9 458 40.2
Lj6g0003901 Lotus japonicus HOM05D007725 ORTHO05D009774 4.0e-31 140.2 358 48.0
AUR62040655 Chenopodium quinoa HOM05D007725 ORTHO05D009774 6.8e-31 139.4 341 49.9
Lj2g0017250 Lotus japonicus HOM05D007725 ORTHO05D009774 1.2e-30 138.7 467 27.8
AUR62017062 Chenopodium quinoa HOM05D007725 ORTHO05D009774 2.6e-30 137.5 341 49.6
BraA05t21757Z Brassica rapa HOM05D007725 ORTHO05D009774 9.2e-28 129.0 212 40.6
Thecc.07G022000 Theobroma cacao HOM05D007725 ORTHO05D009774 1.2e-22 112.1 170 40.6
HPP92_006089 Vanilla planifolia HOM05D007725 ORTHO05D009774 2.0e-22 111.3 456 39.7
BcaC01g03576 Brassica carinata HOM05D007725 ORTHO05D009774 8.1e-16 89.4 145 38.6
TPR.G1910 Trifolium pratense HOM05D007725 ORTHO05D009774 1.8e-15 88.2 92 51.1
CDE04G3331 Ceratophyllum demersum HOM05D000050 ORTHO05D009774 1.2e-11 75.5 136 32.4
BcaC02g11617 Brassica carinata HOM05D007725 ORTHO05D009774 8.1e-08 62.8 48 60.4
Thecc.07G020700 Theobroma cacao HOM05D007725 ORTHO05D009774 4.5e-06 57.0 121 28.9


User provided reference genes

Program Settings