Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0333671 Helianthus annuus HOM05D008013 ORTHO05D010149 3.8e-39 164.5 88 100.0
Thecc.05G204600 Theobroma cacao HOM05D008013 ORTHO05D010149 6.0e-29 130.6 88 76.1
THA.LOC104803516 Tarenaya hassleriana HOM05D008013 ORTHO05D010149 1.3e-28 129.4 88 71.6
Lj1g0002079 Lotus japonicus HOM05D008013 ORTHO05D010149 3.0e-28 128.3 88 71.6
Cc09_g03310 Coffea canephora HOM05D008013 ORTHO05D010149 5.1e-28 127.5 88 71.6
Gohir.D08G244400 Gossypium hirsutum HOM05D008013 ORTHO05D010149 6.7e-28 127.1 88 73.9
Actinidia34775 Actinidia chinensis HOM05D008013 ORTHO05D010149 1.5e-27 125.9 88 72.7
Gohir.A08G224100 Gossypium hirsutum HOM05D008013 ORTHO05D010149 1.5e-27 125.9 88 72.7
Dinv02912 Davidia involucrata HOM05D008013 ORTHO05D010149 5.6e-27 124.0 88 71.6
Lalb_Chr19g0126801 Lupinus albus HOM05D008013 ORTHO05D010149 5.6e-27 124.0 88 70.5
TPR.G29412 Trifolium pratense HOM05D008013 ORTHO05D010149 1.3e-26 122.9 88 69.3
GSVIVG01019150001 Vitis vinifera HOM05D008013 ORTHO05D010149 1.6e-26 122.5 88 72.7
Haze_04520 Corylus avellana HOM05D008013 ORTHO05D010149 2.1e-26 122.1 88 69.3
CSS0003713 Camellia sinensis var. sinensis HOM05D008013 ORTHO05D010149 2.8e-26 121.7 88 70.5
CSS0043393 Camellia sinensis var. sinensis HOM05D008013 ORTHO05D010149 2.8e-26 121.7 88 70.5
Manes.09G183801 Manihot esculenta HOM05D008013 ORTHO05D010149 4.8e-26 120.9 88 72.7
CiPaw.08G117300 Carya illinoinensis HOM05D008013 ORTHO05D010149 6.2e-26 120.6 88 67.0
MD04G1240900 Malus domestica HOM05D008013 ORTHO05D010149 6.2e-26 120.6 88 68.2
Sed0019978 Sechium edule HOM05D008013 ORTHO05D010149 6.2e-26 120.6 88 65.9
Solyc04g150139.1 Solanum lycopersicum HOM05D008013 ORTHO05D010149 6.2e-26 120.6 84 73.8
Glyma.18G240151 Glycine max HOM05D008013 ORTHO05D010149 8.2e-26 120.2 81 72.8
Glyma.09G252532 Glycine max HOM05D008013 ORTHO05D010149 1.1e-25 119.8 81 71.6
MD12G1257800 Malus domestica HOM05D008013 ORTHO05D010149 1.1e-25 119.8 88 67.0
CAN.G4.29 Capsicum annuum HOM05D008013 ORTHO05D010149 1.4e-25 119.4 84 72.6
RcHm_v2.0_Chr3g0448311 Rosa chinensis HOM05D008013 ORTHO05D010149 1.4e-25 119.4 88 67.0
Rhsim09G0131000 Rhododendron simsii HOM05D008013 ORTHO05D010149 1.8e-25 119.0 89 70.8
Phvul.008G056200 Phaseolus vulgaris HOM05D008013 ORTHO05D010149 3.1e-25 118.2 84 70.2
Oeu001239.1 Olea europaea HOM05D008013 ORTHO05D010149 4.0e-25 117.9 88 70.5
TWI59G0485 Tripterygium wilfordii HOM05D008013 ORTHO05D010149 4.0e-25 117.9 84 72.6
CsaV3_5G032690 Cucumis sativus L. HOM05D008013 ORTHO05D010149 9.0e-25 116.7 88 64.8
HanXRQChr05g0156911 Helianthus annuus HOM05D000837 ORTHO05D008386 9.0e-25 116.7 81 79.0
Ciclev10013456m.g Citrus clementina HOM05D008013 ORTHO05D010149 2.6e-24 115.2 87 67.8
Gorai.004G260700 Gossypium raimondii HOM05D008013 ORTHO05D010149 1.7e-23 112.5 81 71.6
Nn1g08299 Nelumbo nucifera HOM05D008013 ORTHO05D010149 1.7e-23 112.5 88 62.5
FAN05G0262 Fragaria x ananassa HOM05D008013 ORTHO05D010149 4.9e-23 110.9 101 59.4
Gohir.D13G159800 Gossypium hirsutum HOM05D008013 ORTHO05D010149 4.9e-23 110.9 81 70.4
Gohir.A13G155000 Gossypium hirsutum HOM05D008013 ORTHO05D010149 1.4e-22 109.4 81 70.4
Migut.F02069 Erythranthe guttata HOM05D008013 ORTHO05D010149 1.9e-22 109.0 88 62.5
Sp7g28270 Schrenkiella parvula HOM05D008013 ORTHO05D010149 2.5e-22 108.6 83 60.2
Atru.chr12.2150 Acer truncatum HOM05D008013 ORTHO05D010149 3.2e-22 108.2 81 67.9
CANSAT54G1767 Cannabis sativa HOM05D000837 ORTHO05D008386 4.2e-22 107.8 81 66.7
Potri.019G051850 Populus trichocarpa HOM05D008013 ORTHO05D010149 4.2e-22 107.8 80 67.5
AL7G21760 Arabidopsis lyrata HOM05D008013 ORTHO05D010149 5.5e-22 107.5 83 61.4
Carub.0007s1021 Capsella rubella HOM05D008013 ORTHO05D010149 7.1e-22 107.1 83 59.0
AT4G30390 Arabidopsis thaliana HOM05D008013 ORTHO05D010149 2.1e-21 105.5 86 57.0
Aa31LG2G20150 Aethionema arabicum HOM05D008013 ORTHO05D010149 2.7e-21 105.1 83 60.2
Thhalv10026665m.g Eutrema salsugineum HOM05D008013 ORTHO05D010149 1.0e-20 103.2 83 61.4
PGR119G0441 Punica granatum HOM05D000837 ORTHO05D008386 1.0e-20 103.2 81 64.2
C07p57840 Brassica napus HOM05D008013 ORTHO05D010149 1.3e-20 102.8 83 56.6
BolC7t46244H Brassica oleracea HOM05D008013 ORTHO05D010149 1.3e-20 102.8 83 56.6
arahy.Tifrunner.gnm1.ann1.L7M8PN Arachis hypogaea HOM05D008013 ORTHO05D010149 1.8e-20 102.4 77 64.9
EL10Ac4g09411 Beta vulgaris HOM05D008013 ORTHO05D010149 3.0e-20 101.7 83 62.7
A08p19260 Brassica napus HOM05D008013 ORTHO05D010149 3.0e-20 101.7 83 56.6
BraA08t33887Z Brassica rapa HOM05D008013 ORTHO05D010149 3.0e-20 101.7 83 56.6
unitig_736.g22502 Utricularia gibba HOM05D008013 ORTHO05D010149 3.9e-20 101.3 81 64.2
A03p59800 Brassica napus HOM05D008013 ORTHO05D010149 5.1e-20 100.9 85 54.1
BcaNung00543 Brassica carinata HOM05D008013 ORTHO05D010149 8.7e-20 100.1 83 54.2
Ah.06g195780 Amaranthus hybridus HOM05D008013 ORTHO05D010149 1.1e-19 99.8 84 61.9
BraA03t15033Z Brassica rapa HOM05D008013 ORTHO05D010149 2.5e-19 98.6 83 55.4
SHI02464 Sapria himalayana HOM05D008013 ORTHO05D010149 7.4e-19 97.1 80 61.2
vmacro10397 Vaccinium macrocarpon HOM05D000837 ORTHO05D008386 7.4e-19 97.1 103 58.3
Hund07321 Selenicereus undatus HOM05D008013 ORTHO05D010149 9.7e-19 96.7 77 63.6
Hund21874 Selenicereus undatus HOM05D008013 ORTHO05D010149 1.1e-17 93.2 70 68.6
ClCG10G008070 Citrullus lanatus HOM05D000837 ORTHO05D008386 2.4e-17 92.0 117 46.2
PSO170G5632 Papaver somniferum HOM05D000837 ORTHO05D008386 5.3e-17 90.9 83 54.2
PSO357G0534 Papaver somniferum HOM05D008013 ORTHO05D010149 6.9e-17 90.5 83 54.2
Pp3c1_15100 Physcomitrium patens HOM05D008013 ORTHO05D010149 1.5e-16 89.4 86 47.7
Sabra19G0056800 Salix brachista HOM05D008013 ORTHO05D010149 2.2e-15 85.5 130 40.0
BcaB03g12645 Brassica carinata HOM05D008013 ORTHO05D010149 1.2e-13 79.7 84 50.0
PGSC0003DMG402023117 Solanum tuberosum HOM05D008013 ORTHO05D010149 2.1e-13 79.0 58 67.2
AagrBONN_evm.TU.Sc2ySwM_228.1824 Anthoceros agrestis HOM05D008013 ORTHO05D010149 1.5e-11 72.8 80 48.8
Sed0019520 Sechium edule HOM05D008013 ORTHO05D010149 5.7e-11 70.9 48 66.7
Sc16g0010260 Simmondsia chinensis HOM05D008013 ORTHO05D010149 1.7e-10 69.3 44 75.0
TAR109G0001 Trochodendron aralioides HOM05D008013 ORTHO05D010149 3.7e-10 68.2 42 73.8
CARHR238290 Cardamine hirsuta HOM05D008013 ORTHO05D010149 6.3e-10 67.4 49 57.1
FAN09G3946 Fragaria x ananassa HOM05D000837 ORTHO05D008386 6.3e-10 67.4 49 65.3
MBI07_g00621_MAGBIO Magnolia biondii HOM05D000837 ORTHO05D008386 1.8e-09 65.9 50 64.0
Mapoly0013s0068 Marchantia polymorpha HOM05D008013 ORTHO05D010149 5.3e-09 64.3 85 41.2
BcaC01g01153 Brassica carinata HOM05D008013 ORTHO05D010149 3.4e-08 61.6 67 46.3


User provided reference genes

Program Settings