Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0332931 Helianthus annuus HOM05D009374 ORTHO05D012864 3.1e-167 592.0 369 100.0
HanXRQChr11g0332911 Helianthus annuus HOM05D009374 ORTHO05D012864 5.1e-114 415.2 373 64.1
HanXRQChr11g0337791 Helianthus annuus HOM05D009374 ORTHO05D012864 6.1e-83 312.0 376 54.5
Lsat_1_v5_gn_7_106501 Lactuca sativa HOM05D009374 ORTHO05D012864 3.5e-46 189.9 371 38.3
HanXRQChr15g0493431 Helianthus annuus HOM05D009374 ORTHO05D012864 7.8e-46 188.7 370 37.8
Lsat_1_v5_gn_7_93341 Lactuca sativa HOM05D009374 ORTHO05D012864 1.3e-37 161.4 372 39.2
Lsat_1_v5_gn_7_93361 Lactuca sativa HOM05D009374 ORTHO05D012864 1.3e-37 161.4 372 39.2
Lsat_1_v5_gn_7_93381 Lactuca sativa HOM05D009374 ORTHO05D012864 1.3e-37 161.4 372 39.2
Lsat_1_v5_gn_7_93441 Lactuca sativa HOM05D009374 ORTHO05D012864 1.3e-37 161.4 372 39.2
Lsat_1_v5_gn_7_93500 Lactuca sativa HOM05D009374 ORTHO05D012864 1.3e-37 161.4 372 39.2
Lsat_1_v5_gn_7_93520 Lactuca sativa HOM05D009374 ORTHO05D012864 1.3e-37 161.4 372 39.2
ECA248G3520 Erigeron canadensis HOM05D009374 ORTHO05D012864 6.9e-34 149.1 379 35.4
ECA236G3141 Erigeron canadensis HOM05D009374 ORTHO05D012864 1.3e-29 134.8 408 33.3
ECA236G4404 Erigeron canadensis HOM05D009374 ORTHO05D012864 1.8e-29 134.4 194 47.4
ECA236G3076 Erigeron canadensis HOM05D009374 ORTHO05D012864 4.3e-28 129.8 398 32.2
ECA236G0204 Erigeron canadensis HOM05D009374 ORTHO05D012864 2.1e-22 110.9 205 42.4
Dinv26537 Davidia involucrata HOM05D006536 ORTHO05D005877 4.2e-15 86.7 150 44.0
Lsat_1_v5_gn_8_65721 Lactuca sativa HOM05D009374 ORTHO05D012864 6.1e-14 82.8 153 45.1
Lsat_1_v5_gn_7_108000 Lactuca sativa HOM05D009374 ORTHO05D012864 2.3e-13 80.9 261 29.5
HanXRQChr13g0408641 Helianthus annuus HOM05D009374 ORTHO05D005877 6.7e-13 79.3 162 38.3
ECA236G4149 Erigeron canadensis HOM05D009374 ORTHO05D012864 1.1e-12 78.6 175 38.3
Eucgr.F03431 Eucalyptus grandis HOM05D006536 ORTHO05D005877 5.7e-12 76.3 162 39.5
Nitab4.5_0000397g0170 Nicotiana tabacum HOM05D006536 ORTHO05D005877 5.7e-12 76.3 156 36.5
Peaxi162Scf00450g00873 Petunia axillaris HOM05D006536 ORTHO05D005877 7.4e-12 75.9 158 36.7
SGA_v2.0_scaffold13G06717 Striga asiatica HOM05D006536 ORTHO05D005877 1.3e-11 75.1 125 40.0
Hma1.2p1_0745F.1_g212040 Hydrangea macrophylla HOM05D006536 ORTHO05D005877 1.6e-11 74.7 146 36.3
unitig_744.g24698 Utricularia gibba HOM05D009374 ORTHO05D005877 2.2e-11 74.3 151 31.8
Dinv40717 Davidia involucrata HOM05D006536 ORTHO05D005877 2.8e-11 73.9 119 44.5
Migut.J01035 Erythranthe guttata HOM05D006536 ORTHO05D005877 4.1e-10 70.1 157 38.2
Nitab4.5_0000472g0270 Nicotiana tabacum HOM05D006536 ORTHO05D005877 4.1e-10 70.1 154 32.5
Peaxi162Scf00450g00854 Petunia axillaris HOM05D006536 ORTHO05D005877 1.2e-09 68.6 152 32.9
Sed0024994 Sechium edule HOM05D006536 ORTHO05D005877 1.2e-09 68.6 151 33.8
Migut.J01041 Erythranthe guttata HOM05D006536 ORTHO05D005877 1.5e-09 68.2 117 38.5
Peaxi162Scf00450g00816 Petunia axillaris HOM05D006536 ORTHO05D005877 1.5e-09 68.2 161 34.8
PSO541G5532 Papaver somniferum HOM05D006536 ORTHO05D005877 2.0e-09 67.8 153 31.4
SGA_v2.0_scaffold13G06718 Striga asiatica HOM05D006536 ORTHO05D005877 2.6e-09 67.4 127 35.4
Migut.J01038 Erythranthe guttata HOM05D006536 ORTHO05D005877 4.5e-09 66.6 157 38.9
Nitab4.5_0006023g0020 Nicotiana tabacum HOM05D006536 ORTHO05D005877 4.5e-09 66.6 152 32.9
Peaxi162Scf00057g00136 Petunia axillaris HOM05D006536 ORTHO05D005877 7.7e-09 65.9 155 33.5
Solyc07g064210.2 Solanum lycopersicum HOM05D006536 ORTHO05D005877 1.0e-08 65.5 153 33.3
Nitab4.5_0004487g0010 Nicotiana tabacum HOM05D006536 ORTHO05D005877 2.2e-08 64.3 119 36.1
vmacro11762 Vaccinium macrocarpon HOM05D006536 ORTHO05D005877 2.2e-08 64.3 119 39.5
Lsat_1_v5_gn_5_5901 Lactuca sativa HOM05D009374 ORTHO05D005877 2.9e-08 63.9 76 43.4
COL.COLO4_09579 Corchorus olitorius HOM05D006536 ORTHO05D005877 3.8e-08 63.5 374 23.8
Nitab4.5_0001479g0050 Nicotiana tabacum HOM05D006536 ORTHO05D005877 3.8e-08 63.5 157 31.8
PSO541G2788 Papaver somniferum HOM05D006536 ORTHO05D005877 5.0e-08 63.2 152 32.2
PSO541G4685 Papaver somniferum HOM05D006536 ORTHO05D005877 5.0e-08 63.2 153 30.1
PSO541G3913 Papaver somniferum HOM05D006536 ORTHO05D005877 6.5e-08 62.8 152 32.9
vmacro11763 Vaccinium macrocarpon HOM05D006536 ORTHO05D005877 8.5e-08 62.4 114 43.0
Nn1g07020 Nelumbo nucifera HOM05D023228 ORTHO05D005877 1.1e-07 62.0 156 33.3
Nitab4.5_0001479g0060 Nicotiana tabacum HOM05D006536 ORTHO05D005877 1.1e-07 62.0 126 34.1
PGSC0003DMG400001033 Solanum tuberosum HOM05D006536 ORTHO05D005877 1.1e-07 62.0 153 31.4
Cfa020408 Carpinus fangiana HOM05D006536 ORTHO05D005877 1.9e-07 61.2 160 36.2
Sopen07g032360 Solanum pennellii HOM05D006536 ORTHO05D005877 1.9e-07 61.2 155 33.5
Atru.chr2.3226 Acer truncatum HOM05D001264 ORTHO05D001167 2.5e-07 60.8 131 36.6
PSO478G5239 Papaver somniferum HOM05D006536 ORTHO05D005877 2.5e-07 60.8 150 31.3
SalBow3G0084 Salvia bowleyana HOM05D003262 ORTHO05D003608 3.2e-07 60.5 158 28.5
unitig_8.g4307 Utricularia gibba HOM05D006536 ORTHO05D005877 5.5e-07 59.7 154 35.1
EL10Ac4g07942 Beta vulgaris HOM05D009374 ORTHO05D005877 7.2e-07 59.3 152 30.9
PSO675G9181 Papaver somniferum HOM05D006536 ORTHO05D005877 9.4e-07 58.9 149 29.5
PGR083G0291 Punica granatum HOM05D006536 ORTHO05D005877 1.6e-06 58.2 160 31.9
Solyc07g064220.1 Solanum lycopersicum HOM05D006536 ORTHO05D005877 2.7e-06 57.4 135 33.3
Sopen07g032350 Solanum pennellii HOM05D006536 ORTHO05D005877 2.7e-06 57.4 119 33.6
AUR62020540 Chenopodium quinoa HOM05D009374 ORTHO05D005877 3.6e-06 57.0 145 30.3
Eucgr.F00977 Eucalyptus grandis HOM05D006536 ORTHO05D005877 4.6e-06 56.6 163 33.1
Nn1g07017 Nelumbo nucifera HOM05D023228 ORTHO05D005877 4.6e-06 56.6 160 31.2
Nitab4.5_0001479g0070 Nicotiana tabacum HOM05D006536 ORTHO05D005877 4.6e-06 56.6 139 33.1
Nitab4.5_0008018g0020 Nicotiana tabacum HOM05D006536 ORTHO05D005877 4.6e-06 56.6 127 31.5
ClCG10G005680 Citrullus lanatus HOM05D006536 ORTHO05D005877 6.1e-06 56.2 149 29.5
MBI18_g21250_MAGBIO Magnolia biondii HOM05D006536 ORTHO05D005877 7.9e-06 55.8 109 35.8
Sopen07g032370 Solanum pennellii HOM05D006536 ORTHO05D005877 7.9e-06 55.8 151 29.8


User provided reference genes

Program Settings