Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0332791 Helianthus annuus HOM05D007813 ORTHO05D009861 4.1e-66 255.0 168 100.0
Lsat_1_v5_gn_6_66140 Lactuca sativa HOM05D007813 ORTHO05D009861 2.2e-32 142.9 152 57.2
ECA233G3331 Erigeron canadensis HOM05D007813 ORTHO05D009861 1.4e-26 123.6 145 57.9
Peaxi162Scf00643g00047 Petunia axillaris HOM05D007813 ORTHO05D009861 1.8e-21 106.7 151 46.4
MSTRG.2075 Avicennia marina HOM05D007813 ORTHO05D009861 1.3e-19 100.5 161 43.5
Oeu039115.1 Olea europaea HOM05D007813 ORTHO05D009861 4.9e-19 98.6 161 41.0
unitig_699.g19640 Utricularia gibba HOM05D007813 ORTHO05D009861 1.1e-18 97.4 145 46.9
Aa31LG4G9500 Aethionema arabicum HOM05D007813 ORTHO05D009861 1.4e-18 97.1 119 46.2
DCAR_023485 Daucus carota HOM05D007813 ORTHO05D009861 1.8e-18 96.7 150 44.0
Cc11_g01070 Coffea canephora HOM05D007813 ORTHO05D009861 3.5e-17 92.4 163 39.9
MELO3C005074.2 Cucumis melo HOM05D007813 ORTHO05D009861 3.5e-17 92.4 158 40.5
CARHR231780 Cardamine hirsuta HOM05D007813 ORTHO05D009861 5.9e-17 91.7 141 41.8
Thhalv10026382m.g Eutrema salsugineum HOM05D007813 ORTHO05D009861 1.0e-16 90.9 146 43.2
Manes.11G001000 Manihot esculenta HOM05D007813 ORTHO05D009861 1.0e-16 90.9 134 44.0
RhsimUnG0102800 Rhododendron simsii HOM05D007813 ORTHO05D009861 1.0e-16 90.9 139 50.4
COL.COLO4_33123 Corchorus olitorius HOM05D007813 ORTHO05D009861 1.7e-16 90.1 182 40.1
Cpa.g.sc30.28 Carica papaya HOM05D007813 ORTHO05D009861 2.9e-16 89.4 156 40.4
CsaV3_5G021820 Cucumis sativus L. HOM05D007813 ORTHO05D009861 2.9e-16 89.4 148 41.2
BraA01t01511Z Brassica rapa HOM05D007813 ORTHO05D009861 3.8e-16 89.0 152 40.1
Sabra07G0000100 Salix brachista HOM05D007813 ORTHO05D009861 3.8e-16 89.0 138 43.5
Duzib248G1033 Durio zibethinus HOM05D007813 ORTHO05D009861 5.0e-16 88.6 175 38.3
HanXRQChr12g0366441 Helianthus annuus HOM05D007813 ORTHO05D009861 6.6e-16 88.2 74 67.6
A01p15750 Brassica napus HOM05D007813 ORTHO05D009861 8.6e-16 87.8 153 39.2
C01p19700 Brassica napus HOM05D007813 ORTHO05D009861 8.6e-16 87.8 144 42.4
BolC1t01897H Brassica oleracea HOM05D007813 ORTHO05D009861 8.6e-16 87.8 144 42.4
Haze_17409 Corylus avellana HOM05D001339 ORTHO05D003609 8.6e-16 87.8 135 46.7
TWI53G2082 Tripterygium wilfordii HOM05D007813 ORTHO05D009861 1.1e-15 87.4 151 47.0
AL7G28850 Arabidopsis lyrata HOM05D007813 ORTHO05D009861 1.5e-15 87.0 155 46.5
Dinv01363 Davidia involucrata HOM05D007813 ORTHO05D009861 1.5e-15 87.0 133 39.8
Nitab4.5_0000146g0130 Nicotiana tabacum HOM05D007813 ORTHO05D009861 1.5e-15 87.0 117 44.4
Sc06g0009980 Simmondsia chinensis HOM05D007813 ORTHO05D009861 1.9e-15 86.7 153 39.9
PGSC0003DMG400031169 Solanum tuberosum HOM05D007813 ORTHO05D009861 1.9e-15 86.7 145 42.1
Ciclev10032850m.g Citrus clementina HOM05D007813 ORTHO05D009861 2.5e-15 86.3 165 38.8
Atru.chr11.1262 Acer truncatum HOM05D007813 ORTHO05D009861 3.3e-15 85.9 161 39.8
Carub.0007s1668 Capsella rubella HOM05D007813 ORTHO05D009861 3.3e-15 85.9 158 39.2
Lalb_Chr04g0259041 Lupinus albus HOM05D007813 ORTHO05D009861 4.3e-15 85.5 148 38.5
Sp7g22350 Schrenkiella parvula HOM05D007813 ORTHO05D009861 5.6e-15 85.1 153 40.5
Hund21950 Selenicereus undatus HOM05D007813 ORTHO05D009861 5.6e-15 85.1 173 36.4
Sopen01g035700 Solanum pennellii HOM05D007813 ORTHO05D009861 5.6e-15 85.1 146 41.8
Thecc.02G153800 Theobroma cacao HOM05D007813 ORTHO05D009861 5.6e-15 85.1 183 38.8
ClCG01G008030 Citrullus lanatus HOM05D007813 ORTHO05D009861 7.3e-15 84.7 154 39.0
SGA_v2.0_scaffold5G02767 Striga asiatica HOM05D007813 ORTHO05D009861 1.6e-14 83.6 142 40.1
Actinidia04359 Actinidia chinensis HOM05D007813 ORTHO05D009861 2.1e-14 83.2 177 35.6
Sed0004061 Sechium edule HOM05D007813 ORTHO05D009861 3.6e-14 82.4 151 45.0
AT4G24370 Arabidopsis thaliana HOM05D007813 ORTHO05D009861 6.1e-14 81.6 154 39.0
EL10Ac9g22652 Beta vulgaris HOM05D000001 ORTHO05D000003 8.0e-14 81.3 166 35.5
FAN07G2714 Fragaria x ananassa HOM05D007813 ORTHO05D009861 1.0e-13 80.9 140 40.7
PSO717G0067 Papaver somniferum HOM05D007813 ORTHO05D009861 3.0e-13 79.3 159 39.0
FAN17G2972 Fragaria x ananassa HOM05D007813 ORTHO05D009861 4.0e-13 79.0 141 39.7
Lj9P278T15 Lonicera japonica HOM05D007813 ORTHO05D009861 5.2e-13 78.6 126 43.7
Nitab4.5_0006894g0030 Nicotiana tabacum HOM05D007813 ORTHO05D009861 6.8e-13 78.2 123 43.1
Aqoxy7G00887 Aquilegia oxysepala HOM05D007813 ORTHO05D009861 8.9e-13 77.8 162 34.0
PSO675G5803 Papaver somniferum HOM05D007813 ORTHO05D009861 8.9e-13 77.8 159 39.6
Psat4g167360 Pisum sativum HOM05D007813 ORTHO05D009861 8.9e-13 77.8 148 37.8
FvH4_4g37240 Fragaria vesca HOM05D007813 ORTHO05D009861 1.5e-12 77.0 157 36.9
Nitab4.5_0001077g0010 Nicotiana tabacum HOM05D007813 ORTHO05D009861 1.5e-12 77.0 116 43.1
Nitab4.5_0008487g0020 Nicotiana tabacum HOM05D007813 ORTHO05D009861 2.6e-12 76.3 123 39.8
Gohir.D02G190500 Gossypium hirsutum HOM05D007813 ORTHO05D009861 3.4e-12 75.9 188 38.3
Gorai.005G213200 Gossypium raimondii HOM05D007813 ORTHO05D009861 5.7e-12 75.1 188 38.3
Gohir.A03G167400 Gossypium hirsutum HOM05D007813 ORTHO05D009861 7.5e-12 74.7 188 37.8
Nitab4.5_0003448g0030 Nicotiana tabacum HOM05D007813 ORTHO05D009861 7.5e-12 74.7 123 39.8
Lj2g0017100 Lotus japonicus HOM05D007813 ORTHO05D009861 9.8e-12 74.3 140 37.1
BcaC09g50873 Brassica carinata HOM05D007813 ORTHO05D009861 2.2e-11 73.2 134 41.0
QL01p000818 Quercus lobata HOM05D007813 ORTHO05D009861 2.2e-11 73.2 151 41.1
Nitab4.5_0004221g0010 Nicotiana tabacum HOM05D007813 ORTHO05D009861 3.7e-11 72.4 96 46.9
Prupe.1G350000 Prunus persica HOM05D007813 ORTHO05D009861 1.4e-10 70.5 161 36.0
MD13G1002400 Malus domestica HOM05D007813 ORTHO05D009861 2.4e-10 69.7 146 37.0
CiPaw.16G001800 Carya illinoinensis HOM05D007813 ORTHO05D009861 3.2e-10 69.3 145 37.2
Glyma.09G285400 Glycine max HOM05D007813 ORTHO05D009861 5.4e-10 68.6 137 38.7
CANSAT78G1292 Cannabis sativa HOM05D007813 ORTHO05D009861 7.0e-10 68.2 163 33.7
Nn3g16575 Nelumbo nucifera HOM05D007813 ORTHO05D009861 9.2e-10 67.8 150 32.7
Ah.01g003370 Amaranthus hybridus HOM05D007813 ORTHO05D009861 1.2e-09 67.4 171 33.3
AUR62014985 Chenopodium quinoa HOM05D007813 ORTHO05D009861 1.6e-09 67.0 157 31.8
RcHm_v2.0_Chr4g0447031 Rosa chinensis HOM05D007813 ORTHO05D009861 1.6e-09 67.0 147 38.8
Lju470C5T0 Lonicera japonica HOM05D007813 ORTHO05D009861 2.0e-09 66.6 114 40.4
HPP92_002530 Vanilla planifolia HOM05D007813 ORTHO05D009861 3.5e-09 65.9 159 35.2
CDE02G1922 Ceratophyllum demersum HOM05D000644 ORTHO05D000504 7.8e-09 64.7 163 32.5
Migut.E00672 Erythranthe guttata HOM05D007813 ORTHO05D009861 1.0e-08 64.3 136 37.5
TAR374G1573 Trochodendron aralioides HOM05D007813 ORTHO05D009861 5.0e-08 62.0 163 36.8
Ca_23410_v3 Cicer arietinum L. HOM05D007813 ORTHO05D009861 6.6e-08 61.6 118 35.6
Solyc01g089857.1 Solanum lycopersicum HOM05D007813 ORTHO05D009861 1.5e-07 60.5 129 36.4
TPR.G29991 Trifolium pratense HOM05D007813 ORTHO05D009861 3.3e-07 59.3 141 34.8
Medtr8g022020 Medicago truncatula HOM05D007813 ORTHO05D009861 7.3e-07 58.2 151 31.1


User provided reference genes

Program Settings