Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0332551 Helianthus annuus HOM05D006857 ORTHO05D008679 4.1e-52 208.0 120 100.0
HanXRQChr06g0182801 Helianthus annuus HOM05D006857 ORTHO05D008679 7.0e-20 100.9 49 98.0
HanXRQChr17g0562081 Helianthus annuus HOM05D006857 ORTHO05D222057 2.7e-19 99.0 71 93.0
ECA234G1558 Erigeron canadensis HOM05D006857 ORTHO05D005985 1.3e-13 80.1 49 73.5
Lsat_1_v5_gn_2_41360 Lactuca sativa HOM05D006857 ORTHO05D008679 8.3e-13 77.4 51 72.5
TPR.G11804 Trifolium pratense HOM05D006857 ORTHO05D008679 7.7e-11 70.9 50 68.0
Potri.008G171900 Populus trichocarpa HOM05D006857 ORTHO05D008679 1.0e-10 70.5 50 64.0
Hund20529 Selenicereus undatus HOM05D006857 ORTHO05D008679 1.0e-10 70.5 50 70.0
Lalb_Chr03g0036951 Lupinus albus HOM05D006857 ORTHO05D008679 1.7e-10 69.7 50 68.0
Manes.03G158900 Manihot esculenta HOM05D006857 ORTHO05D008679 2.9e-10 68.9 50 66.0
Sabra08G0131200 Salix brachista HOM05D006857 ORTHO05D008679 3.8e-10 68.6 50 62.0
CANSAT78G0655 Cannabis sativa HOM05D006857 ORTHO05D008679 5.0e-10 68.2 50 66.0
Psat7g076560 Pisum sativum HOM05D006857 ORTHO05D008679 5.0e-10 68.2 50 66.0
VMungo0720G0849 Vigna mungo HOM05D006857 ORTHO05D008679 5.0e-10 68.2 52 63.5
Ca_17963_v3 Cicer arietinum L. HOM05D006857 ORTHO05D008679 6.6e-10 67.8 50 64.0
Phvul.007G231500 Phaseolus vulgaris HOM05D006857 ORTHO05D008679 6.6e-10 67.8 50 66.0
CAN.G524.29 Capsicum annuum HOM05D006857 ORTHO05D008679 1.1e-09 67.0 50 64.0
Lj6C621T18 Lonicera japonica HOM05D006857 ORTHO05D008679 1.1e-09 67.0 50 66.0
Sc19g0005530 Simmondsia chinensis HOM05D006857 ORTHO05D008679 1.1e-09 67.0 52 63.5
ATR0787G032 Amborella trichopoda HOM05D006857 ORTHO05D008679 1.9e-09 66.2 50 64.0
MBI10_g35430_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 1.9e-09 66.2 52 67.3
Nn1g02958 Nelumbo nucifera HOM05D006857 ORTHO05D008679 1.9e-09 66.2 52 65.4
CSS0034732 Camellia sinensis var. sinensis HOM05D006857 ORTHO05D008679 2.5e-09 65.9 50 70.0
Glyma.10G132600 Glycine max HOM05D006857 ORTHO05D008679 2.5e-09 65.9 50 62.0
Rhsim04G0172300 Rhododendron simsii HOM05D006857 ORTHO05D008679 2.5e-09 65.9 50 66.0
Aqoxy2G03746 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 4.2e-09 65.1 50 64.0
Aqoxy7G02302 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 4.2e-09 65.1 50 64.0
arahy.Tifrunner.gnm1.ann1.I81STG Arachis hypogaea HOM05D006857 ORTHO05D008679 4.2e-09 65.1 50 64.0
arahy.Tifrunner.gnm1.ann1.SJBM1Y Arachis hypogaea HOM05D006857 ORTHO05D008679 4.2e-09 65.1 50 64.0
Cfa014781 Carpinus fangiana HOM05D006857 ORTHO05D008679 4.2e-09 65.1 52 59.6
Oeu002936.2 Olea europaea HOM05D006857 ORTHO05D008679 4.2e-09 65.1 50 64.0
QL06p021004 Quercus lobata HOM05D006857 ORTHO05D008679 4.2e-09 65.1 50 60.0
GSVIVG01027915001 Vitis vinifera HOM05D006857 ORTHO05D008679 4.2e-09 65.1 50 62.0
EL10Ac3g06657 Beta vulgaris HOM05D006857 ORTHO05D008679 7.2e-09 64.3 50 62.0
Cc03_g06310 Coffea canephora HOM05D006857 ORTHO05D008679 7.2e-09 64.3 50 64.0
PSO017G4333 Papaver somniferum HOM05D006857 ORTHO05D008679 7.2e-09 64.3 50 62.0
Cpa.g.sc44.1 Carica papaya HOM05D006857 ORTHO05D008679 9.5e-09 63.9 50 62.0
ClCG05G004000 Citrullus lanatus HOM05D006857 ORTHO05D008679 9.5e-09 63.9 52 57.7
MELO3C006377.2 Cucumis melo HOM05D006857 ORTHO05D008679 9.5e-09 63.9 54 57.4
Lj6g0000537 Lotus japonicus HOM05D006857 ORTHO05D008679 9.5e-09 63.9 50 60.0
Zm00001eb077400 Zea mays HOM05D006857 ORTHO05D008679 9.5e-09 63.9 52 59.6
Solyc09g090690.4 Solanum lycopersicum HOM05D006857 ORTHO05D008679 1.2e-08 63.5 50 62.0
Sopen09g033630 Solanum pennellii HOM05D006857 ORTHO05D008679 1.2e-08 63.5 50 62.0
PGSC0003DMG400017145 Solanum tuberosum HOM05D006857 ORTHO05D008679 1.2e-08 63.5 50 62.0
Sed0022275 Sechium edule HOM05D006857 ORTHO05D008679 1.6e-08 63.2 52 57.7
TAR362G0064 Trochodendron aralioides HOM05D006857 ORTHO05D008679 1.6e-08 63.2 50 62.0
Atru.chr4.1915 Acer truncatum HOM05D006857 ORTHO05D008679 2.1e-08 62.8 50 62.0
Actinidia35816 Actinidia chinensis HOM05D006857 ORTHO05D008679 2.1e-08 62.8 50 64.0
Ciclev10005032m.g Citrus clementina HOM05D006857 ORTHO05D008679 2.1e-08 62.8 50 60.0
DCAR_002298 Daucus carota HOM05D004684 ORTHO05D006904 2.1e-08 62.8 50 60.0
Peaxi162Scf00153g01846 Petunia axillaris HOM05D006857 ORTHO05D008679 2.1e-08 62.8 50 62.0
CsaV3_3G011690 Cucumis sativus L. HOM05D006857 ORTHO05D008679 2.8e-08 62.4 52 55.8
Haze_11458 Corylus avellana HOM05D006857 ORTHO05D008679 3.6e-08 62.0 52 57.7
Medtr8g085480 Medicago truncatula HOM05D006857 ORTHO05D008679 3.6e-08 62.0 50 60.0
COL.COLO4_15963 Corchorus olitorius HOM05D006857 ORTHO05D008679 4.7e-08 61.6 50 58.0
Dinv27112 Davidia involucrata HOM05D006857 ORTHO05D008679 4.7e-08 61.6 48 64.6
Nitab4.5_0000194g0200 Nicotiana tabacum HOM05D006857 ORTHO05D008679 4.7e-08 61.6 50 60.0
TWI09G0838 Tripterygium wilfordii HOM05D006857 ORTHO05D008679 4.7e-08 61.6 50 62.0
CiPaw.02G107000 Carya illinoinensis HOM05D006857 ORTHO05D008679 6.1e-08 61.2 51 60.8
Nitab4.5_0013063g0010 Nicotiana tabacum HOM05D006857 ORTHO05D008679 6.1e-08 61.2 50 62.0
PSO063G2784 Papaver somniferum HOM05D006857 ORTHO05D008679 6.1e-08 61.2 50 60.0
Prupe.1G048100 Prunus persica HOM05D006857 ORTHO05D008679 6.1e-08 61.2 50 60.0
SGA_v2.0_scaffold67G22686 Striga asiatica HOM05D006857 ORTHO05D008679 6.1e-08 61.2 51 56.9
Aqoxy7G02465 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 8.0e-08 60.8 50 62.0
MSTRG.4172 Avicennia marina HOM05D006857 ORTHO05D008679 8.0e-08 60.8 51 62.7
AUR62018068 Chenopodium quinoa HOM05D006857 ORTHO05D008679 8.0e-08 60.8 50 58.0
Thecc.04G264000 Theobroma cacao HOM05D006857 ORTHO05D008679 8.0e-08 60.8 50 62.0
AUR62015271 Chenopodium quinoa HOM05D006857 ORTHO05D008679 1.0e-07 60.5 50 58.0
MD07G1289900 Malus domestica HOM05D006857 ORTHO05D008679 1.0e-07 60.5 50 56.0
Gohir.D10G158400 Gossypium hirsutum HOM05D006857 ORTHO05D008679 1.4e-07 60.1 50 58.0
Gorai.011G177900 Gossypium raimondii HOM05D006857 ORTHO05D008679 1.4e-07 60.1 50 58.0
Os04g0510700 Oryza sativa ssp. japonica HOM05D006857 ORTHO05D008679 1.4e-07 60.1 50 60.0
Duzib151G0230 Durio zibethinus HOM05D006857 ORTHO05D008679 1.8e-07 59.7 50 58.0
Ah.04g153670 Amaranthus hybridus HOM05D006857 ORTHO05D008679 2.3e-07 59.3 50 56.0
FvH4_5g26950 Fragaria vesca HOM05D006857 ORTHO05D008679 2.3e-07 59.3 51 60.8
Sp7g10880 Schrenkiella parvula HOM05D006857 ORTHO05D008679 2.3e-07 59.3 50 62.0
vmacro08554 Vaccinium macrocarpon HOM05D006857 ORTHO05D008679 3.0e-07 58.9 50 62.0
Migut.G00555 Erythranthe guttata HOM05D006857 ORTHO05D008679 4.0e-07 58.5 51 62.7
MD16G1226200 Malus domestica HOM05D006857 ORTHO05D008679 4.0e-07 58.5 50 56.0
PGR031G1141 Punica granatum HOM05D006857 ORTHO05D008679 4.0e-07 58.5 50 58.0
PGR031G1585 Punica granatum HOM05D006857 ORTHO05D008679 4.0e-07 58.5 50 58.0
SalBow3G1529 Salvia bowleyana HOM05D006857 ORTHO05D008679 4.0e-07 58.5 51 56.9
BcaC08g44309 Brassica carinata HOM05D006857 ORTHO05D008679 5.2e-07 58.2 50 58.0
A05p16520 Brassica napus HOM05D006857 ORTHO05D008679 5.2e-07 58.2 50 58.0
C06p17330 Brassica napus HOM05D006857 ORTHO05D008679 5.2e-07 58.2 50 58.0
BolC6t36929H Brassica oleracea HOM05D006857 ORTHO05D008679 5.2e-07 58.2 50 58.0
BraA05t20557Z Brassica rapa HOM05D006857 ORTHO05D008679 5.2e-07 58.2 50 58.0
CARHR218870 Cardamine hirsuta HOM05D006857 ORTHO05D008679 5.2e-07 58.2 50 62.0
FvH4_4g04570 Fragaria vesca HOM05D006857 ORTHO05D008679 5.2e-07 58.2 51 58.8
Thhalv10026810m.g Eutrema salsugineum HOM05D006857 ORTHO05D008679 6.8e-07 57.8 50 62.0
FAN17G2805 Fragaria x ananassa HOM05D006857 ORTHO05D008679 6.8e-07 57.8 51 58.8
Aa31LG9G4440 Aethionema arabicum HOM05D006857 ORTHO05D008679 8.9e-07 57.4 50 58.0
FAN13G3085 Fragaria x ananassa HOM05D006857 ORTHO05D008679 8.9e-07 57.4 49 61.2
THA.LOC104804575 Tarenaya hassleriana HOM05D006857 ORTHO05D008679 8.9e-07 57.4 50 54.0
RcHm_v2.0_Chr4g0395361 Rosa chinensis HOM05D006857 ORTHO05D008679 1.5e-06 56.6 52 53.8
AL9U10380 Arabidopsis lyrata HOM05D006857 ORTHO05D008679 2.6e-06 55.8 50 60.0
Eucgr.H00127 Eucalyptus grandis HOM05D006857 ORTHO05D008679 2.6e-06 55.8 50 60.0
AT4G13330 Arabidopsis thaliana HOM05D006857 ORTHO05D008679 3.4e-06 55.5 50 60.0
Carub.0007s2931 Capsella rubella HOM05D006857 ORTHO05D008679 3.4e-06 55.5 50 60.0
HanXRQChr04g0118861 Helianthus annuus HOM05D002702 ORTHO05D003416 4.4e-06 55.1 32 90.6
Hma1.2p1_0112F.1_g054740 Hydrangea macrophylla HOM05D006857 ORTHO05D008679 9.8e-06 53.9 41 61.0


User provided reference genes

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