Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0332121 Helianthus annuus HOM05D003841 ORTHO05D004602 2.0e-167 592.4 311 100.0
Lsat_1_v5_gn_7_107821 Lactuca sativa HOM05D003841 ORTHO05D004602 1.7e-94 350.1 310 66.8
ECA236G3199 Erigeron canadensis HOM05D003841 ORTHO05D004602 8.0e-84 314.7 322 57.8
Dinv02831 Davidia involucrata HOM05D003841 ORTHO05D004602 8.3e-65 251.5 338 48.8
CSS0048456 Camellia sinensis var. sinensis HOM05D003841 ORTHO05D004602 5.9e-63 245.4 353 48.4
Lj1A861T58 Lonicera japonica HOM05D003841 ORTHO05D004602 4.3e-61 239.2 335 47.2
Dinv22328 Davidia involucrata HOM05D003841 ORTHO05D004602 8.3e-57 224.9 342 45.0
Cc05_g12980 Coffea canephora HOM05D003841 ORTHO05D004602 2.7e-55 219.9 338 45.9
Actinidia35303 Actinidia chinensis HOM05D003841 ORTHO05D004602 1.0e-54 218.0 357 44.0
Lj8A163G39 Lonicera japonica HOM05D003841 ORTHO05D004602 2.3e-54 216.9 340 45.6
Nitab4.5_0003052g0050 Nicotiana tabacum HOM05D003841 ORTHO05D004602 3.9e-54 216.1 332 43.4
Nitab4.5_0000552g0100 Nicotiana tabacum HOM05D003841 ORTHO05D004602 1.1e-53 214.5 335 42.7
Peaxi162Scf01365g00027 Petunia axillaris HOM05D003841 ORTHO05D004602 1.5e-53 214.2 340 45.6
CSS0046033 Camellia sinensis var. sinensis HOM05D003841 ORTHO05D004602 4.0e-51 206.1 292 47.3
Oeu005438.1 Olea europaea HOM05D003841 ORTHO05D004602 5.2e-51 205.7 344 42.2
TAR627G0073 Trochodendron aralioides HOM05D003841 ORTHO05D004602 6.4e-49 198.7 349 41.0
SGA_v2.0_scaffold9G05000 Striga asiatica HOM05D003841 ORTHO05D004602 4.1e-48 196.1 335 44.2
RhsimUnG0254800 Rhododendron simsii HOM05D003841 ORTHO05D004602 7.8e-47 191.8 342 43.9
Manes.15G079400 Manihot esculenta HOM05D003841 ORTHO05D004602 1.0e-46 191.4 332 40.1
Sopen07g032000 Solanum pennellii HOM05D003841 ORTHO05D004602 1.0e-46 191.4 337 40.1
Lsat_1_v5_gn_2_59361 Lactuca sativa HOM05D003841 ORTHO05D004602 2.3e-46 190.3 153 68.0
QL08p014515 Quercus lobata HOM05D003841 ORTHO05D004602 3.0e-46 189.9 339 40.1
Solyc07g063870.3 Solanum lycopersicum HOM05D003841 ORTHO05D004602 5.1e-46 189.1 335 40.0
Ciclev10008955m.g Citrus clementina HOM05D003841 ORTHO05D004602 1.5e-45 187.6 337 41.8
TAR271G0006 Trochodendron aralioides HOM05D003841 ORTHO05D004602 3.3e-45 186.4 350 39.4
Migut.H01878 Erythranthe guttata HOM05D003841 ORTHO05D004602 4.3e-45 186.0 332 41.9
CiPaw.12G124700 Carya illinoinensis HOM05D003841 ORTHO05D004602 1.6e-44 184.1 320 40.0
TAR271G0005 Trochodendron aralioides HOM05D003841 ORTHO05D004602 3.6e-44 183.0 348 39.7
Nn1g06911 Nelumbo nucifera HOM05D003841 ORTHO05D004602 6.2e-44 182.2 331 38.4
Rhsim06G0189000 Rhododendron simsii HOM05D003841 ORTHO05D004602 6.2e-44 182.2 337 41.5
Rhsim06G0190700 Rhododendron simsii HOM05D003841 ORTHO05D004602 6.2e-44 182.2 337 41.5
PGSC0003DMG400019273 Solanum tuberosum HOM05D003841 ORTHO05D000515 1.1e-43 181.4 303 41.6
Oeu052335.1 Olea europaea HOM05D003841 ORTHO05D004602 4.0e-43 179.5 331 40.2
Potri.001G410100 Populus trichocarpa HOM05D003841 ORTHO05D004602 5.2e-43 179.1 340 40.6
Duzib170G0031 Durio zibethinus HOM05D003841 ORTHO05D004602 4.4e-42 176.0 336 41.4
TWI39G0875 Tripterygium wilfordii HOM05D003841 ORTHO05D004602 5.8e-42 175.6 358 38.5
MSTRG.6876 Avicennia marina HOM05D003841 ORTHO05D004602 2.2e-41 173.7 326 41.1
DCAR_010006 Daucus carota HOM05D003841 ORTHO05D004602 8.3e-41 171.8 319 40.1
Duzib213G0276 Durio zibethinus HOM05D003841 ORTHO05D004602 8.3e-41 171.8 334 41.0
EL10Ac4g08014 Beta vulgaris HOM05D003841 ORTHO05D004602 1.9e-40 170.6 318 41.2
Gohir.A13G142900 Gossypium hirsutum HOM05D003841 ORTHO05D004602 1.9e-40 170.6 327 39.8
Gohir.A11G281600 Gossypium hirsutum HOM05D003841 ORTHO05D004602 2.4e-40 170.2 327 39.8
Gorai.007G317200 Gossypium raimondii HOM05D003841 ORTHO05D004602 2.4e-40 170.2 327 39.4
PSO675G5063 Papaver somniferum HOM05D003841 ORTHO05D004602 2.4e-40 170.2 328 37.5
GSVIVG01014549001 Vitis vinifera HOM05D003841 ORTHO05D004602 2.4e-40 170.2 222 48.6
vmacro11787 Vaccinium macrocarpon HOM05D003841 ORTHO05D004602 4.1e-40 169.5 363 37.5
Cfa020471 Carpinus fangiana HOM05D003841 ORTHO05D004602 7.1e-40 168.7 329 38.3
Gohir.D11G294200 Gossypium hirsutum HOM05D003841 ORTHO05D004602 9.2e-40 168.3 327 38.8
Actinidia10692 Actinidia chinensis HOM05D003841 ORTHO05D004602 1.2e-39 167.9 271 43.9
arahy.Tifrunner.gnm1.ann1.GYU1HX Arachis hypogaea HOM05D003841 ORTHO05D004602 2.7e-39 166.8 338 36.4
TWI38G0390 Tripterygium wilfordii HOM05D003841 ORTHO05D004602 2.7e-39 166.8 353 38.0
Gohir.D13G147500 Gossypium hirsutum HOM05D003841 ORTHO05D004602 4.6e-39 166.0 323 41.5
Gorai.013G165300 Gossypium raimondii HOM05D003841 ORTHO05D004602 4.6e-39 166.0 323 41.2
Sabra16G0281100 Salix brachista HOM05D003841 ORTHO05D004602 4.6e-39 166.0 345 37.4
SalBow7G4379 Salvia bowleyana HOM05D003841 ORTHO05D004602 4.6e-39 166.0 330 40.3
vmacro09595 Vaccinium macrocarpon HOM05D003841 ORTHO05D004602 6.0e-39 165.6 481 32.4
PSO541G4862 Papaver somniferum HOM05D003841 ORTHO05D004602 7.8e-39 165.2 334 38.0
Potri.011G130000 Populus trichocarpa HOM05D003841 ORTHO05D004602 2.3e-38 163.7 341 38.1
arahy.Tifrunner.gnm1.ann1.SIF99T Arachis hypogaea HOM05D003841 ORTHO05D004602 5.1e-38 162.5 338 37.3
COL.COLO4_09535 Corchorus olitorius HOM05D003841 ORTHO05D004602 1.9e-37 160.6 339 37.5
AUR62029272 Chenopodium quinoa HOM05D003841 ORTHO05D004602 2.5e-37 160.2 328 39.0
Medtr4g081550 Medicago truncatula HOM05D003841 ORTHO05D004602 2.5e-37 160.2 327 38.2
Psat7g160280 Pisum sativum HOM05D003841 ORTHO05D004602 4.3e-37 159.5 327 35.8
AUR62041149 Chenopodium quinoa HOM05D003841 ORTHO05D004602 7.3e-37 158.7 324 39.2
ClCG05G014990 Citrullus lanatus HOM05D003841 ORTHO05D004602 7.3e-37 158.7 323 37.5
Sed0013156 Sechium edule HOM05D003841 ORTHO05D004602 1.2e-36 157.9 335 37.9
Hund23360 Selenicereus undatus HOM05D003841 ORTHO05D004602 1.6e-36 157.5 314 38.2
Haze_09572 Corylus avellana HOM05D003841 ORTHO05D004602 2.8e-36 156.8 342 34.5
FvH4_3g21510 Fragaria vesca HOM05D003841 ORTHO05D004602 6.2e-36 155.6 335 38.2
THA.LOC104799894 Tarenaya hassleriana HOM05D003841 ORTHO05D004602 6.2e-36 155.6 335 39.4
DCAR_022502 Daucus carota HOM05D003841 ORTHO05D004602 8.1e-36 155.2 337 38.6
TPR.G34029 Trifolium pratense HOM05D003841 ORTHO05D004602 8.1e-36 155.2 330 37.3
FAN11G1553 Fragaria x ananassa HOM05D003841 ORTHO05D004602 1.1e-35 154.8 335 37.6
Ah.06g183230 Amaranthus hybridus HOM05D003841 ORTHO05D004602 1.4e-35 154.5 315 38.4
Migut.M01831 Erythranthe guttata HOM05D003841 ORTHO05D004602 1.8e-35 154.1 321 41.1
Thecc.07G059100 Theobroma cacao HOM05D003841 ORTHO05D004602 1.8e-35 154.1 333 39.0
Actinidia05162 Actinidia chinensis HOM05D003841 ORTHO05D004602 3.1e-35 153.3 359 36.8
MSTRG.14400 Avicennia marina HOM05D003841 ORTHO05D004602 4.0e-35 152.9 362 34.5
CANSAT11G1059 Cannabis sativa HOM05D003841 ORTHO05D004602 1.5e-34 151.0 317 36.6
VMungo1127G0850 Vigna mungo HOM05D003841 ORTHO05D004602 5.8e-34 149.1 334 35.0
Sc03g0009430 Simmondsia chinensis HOM05D003841 ORTHO05D004602 7.6e-34 148.7 318 35.8
Ca_18832_v3 Cicer arietinum L. HOM05D003841 ORTHO05D004602 9.9e-34 148.3 333 34.8
Ca_30091_v3 Cicer arietinum L. HOM05D003841 ORTHO05D004602 9.9e-34 148.3 333 34.8
FAN21G0547 Fragaria x ananassa HOM05D003841 ORTHO05D004602 1.3e-33 147.9 334 36.8
Phvul.011G146700 Phaseolus vulgaris HOM05D003841 ORTHO05D004602 2.9e-33 146.7 339 35.7
MELO3C018156.2 Cucumis melo HOM05D003841 ORTHO05D004602 3.8e-33 146.4 327 36.1
FAN25G3758 Fragaria x ananassa HOM05D003841 ORTHO05D004602 4.9e-33 146.0 328 37.5
Lalb_Chr01g0006261 Lupinus albus HOM05D003841 ORTHO05D004602 8.4e-33 145.2 333 33.9
CsaV3_3G022650 Cucumis sativus L. HOM05D003841 ORTHO05D004602 1.1e-32 144.8 329 35.9
Eucgr.F03390 Eucalyptus grandis HOM05D003841 ORTHO05D004602 1.1e-32 144.8 344 35.5
Glyma.06G262900 Glycine max HOM05D003841 ORTHO05D004602 1.1e-32 144.8 337 33.5
Lalb_Chr22g0357311 Lupinus albus HOM05D003841 ORTHO05D004602 5.4e-32 142.5 342 35.1
Aqoxy1G03844 Aquilegia oxysepala HOM05D003841 ORTHO05D004602 2.1e-31 140.6 346 34.4
Aa31LG3G10490 Aethionema arabicum HOM05D003841 ORTHO05D004602 2.7e-31 140.2 324 35.2
Lj3g0010893 Lotus japonicus HOM05D003841 ORTHO05D004602 3.5e-31 139.8 338 34.0
Carub.0008s1482 Capsella rubella HOM05D003841 ORTHO05D004602 6.0e-31 139.0 314 36.9
DCAR_008683 Daucus carota HOM05D003841 ORTHO05D004602 1.0e-30 138.3 320 37.8
FAN16G3040 Fragaria x ananassa HOM05D003841 ORTHO05D004602 1.0e-30 138.3 333 35.7
SGA_v2.0_scaffold70G23570 Striga asiatica HOM05D003841 ORTHO05D004602 1.7e-30 137.5 321 36.8
Hund02157 Selenicereus undatus HOM05D003841 ORTHO05D004602 2.3e-30 137.1 310 39.4
TAR623G1765 Trochodendron aralioides HOM05D003841 ORTHO05D004602 3.0e-30 136.7 333 34.2
Glyma.13G284700 Glycine max HOM05D003841 ORTHO05D004602 5.1e-30 136.0 323 33.4
unitig_746.g26819 Utricularia gibba HOM05D003841 ORTHO05D004602 1.1e-29 134.8 303 35.0
Prupe.4G197300 Prunus persica HOM05D003841 ORTHO05D004602 1.5e-29 134.4 335 36.7
AL8G29910 Arabidopsis lyrata HOM05D003841 ORTHO05D004602 3.3e-29 133.3 327 34.9
AT5G54540 Arabidopsis thaliana HOM05D003841 ORTHO05D004602 7.3e-29 132.1 319 34.2
unitig_899.g15555 Utricularia gibba HOM05D003841 ORTHO05D004602 9.6e-29 131.7 323 35.6
CDE05G3666 Ceratophyllum demersum HOM05D003841 ORTHO05D004602 2.1e-28 130.6 316 31.0
Sp6g16510 Schrenkiella parvula HOM05D003841 ORTHO05D004602 4.8e-28 129.4 319 33.9
Glyma.12G139800 Glycine max HOM05D003841 ORTHO05D004602 6.2e-28 129.0 349 30.4
CARHR267820 Cardamine hirsuta HOM05D003841 ORTHO05D004602 8.1e-28 128.6 321 34.9
ATR0804G047 Amborella trichopoda HOM05D003841 ORTHO05D004602 1.1e-27 128.3 334 33.8
MD11G1230100 Malus domestica HOM05D003841 ORTHO05D004602 5.3e-27 125.9 343 33.2
CDE05G3612 Ceratophyllum demersum HOM05D003841 ORTHO05D004602 6.9e-27 125.6 318 30.2
MBI18_g38396_MAGBIO Magnolia biondii HOM05D003841 ORTHO05D004602 6.9e-27 125.6 337 34.1
PSO675G0068 Papaver somniferum HOM05D003841 ORTHO05D004602 6.9e-27 125.6 319 32.6
Lj3g0010292 Lotus japonicus HOM05D003841 ORTHO05D004602 9.0e-27 125.2 325 32.9
Glyma.12G216500 Glycine max HOM05D003841 ORTHO05D004602 5.8e-26 122.5 323 32.2
HPP92_004148 Vanilla planifolia HOM05D003841 ORTHO05D004602 5.8e-26 122.5 329 33.7
BcaB08g35813 Brassica carinata HOM05D003841 ORTHO05D004602 7.6e-26 122.1 333 35.4
A10p11770 Brassica napus HOM05D003841 ORTHO05D004602 7.6e-26 122.1 322 34.8
BraA10t43276Z Brassica rapa HOM05D003841 ORTHO05D004602 1.3e-25 121.3 326 34.4
Zm00001eb413050 Zea mays HOM05D003841 ORTHO05D004602 1.3e-25 121.3 334 32.3
CAN.G64.40 Capsicum annuum HOM05D003841 ORTHO05D004602 1.7e-25 120.9 170 42.9
MD03G1215500 Malus domestica HOM05D003841 ORTHO05D004602 1.1e-24 118.2 339 33.9
Zm00001eb171810 Zea mays HOM05D003841 ORTHO05D004602 1.1e-24 118.2 339 32.4
A02p10210 Brassica napus HOM05D003841 ORTHO05D004602 1.9e-24 117.5 322 34.8
CAN.G1160.11 Capsicum annuum HOM05D003841 ORTHO05D004602 2.4e-24 117.1 206 37.4
PSO541G5517 Papaver somniferum HOM05D003841 ORTHO05D004602 4.2e-24 116.3 220 35.5
Thhalv10014255m.g Eutrema salsugineum HOM05D003841 ORTHO05D004602 5.4e-24 115.9 321 33.6
BcaC04g20329 Brassica carinata HOM05D003841 ORTHO05D004602 7.1e-24 115.5 322 33.2
C02p16910 Brassica napus HOM05D003841 ORTHO05D004602 7.1e-24 115.5 321 34.9
Sabra11G0117400 Salix brachista HOM05D003841 ORTHO05D004602 1.6e-23 114.4 294 36.7
arahy.Tifrunner.gnm1.ann1.SKE74K Arachis hypogaea HOM05D003841 ORTHO05D004602 2.3e-22 110.5 331 32.6
C09p44880 Brassica napus HOM05D003841 ORTHO05D004602 3.0e-22 110.2 322 32.6
BolC9t57359H Brassica oleracea HOM05D003841 ORTHO05D004602 5.1e-22 109.4 337 31.8
BraA02t06092Z Brassica rapa HOM05D003841 ORTHO05D004602 1.5e-21 107.8 316 33.2
arahy.Tifrunner.gnm1.ann1.SRRR95 Arachis hypogaea HOM05D003841 ORTHO05D004602 4.3e-21 106.3 336 33.0
RcHm_v2.0_Chr5g0036951 Rosa chinensis HOM05D003841 ORTHO05D004602 7.3e-21 105.5 238 34.5
Oeu052334.1 Olea europaea HOM05D003841 ORTHO05D004602 6.2e-20 102.4 227 33.5
HPP92_005894 Vanilla planifolia HOM05D003841 ORTHO05D004602 1.8e-19 100.9 325 30.5
Os08g0179900 Oryza sativa ssp. japonica HOM05D003841 ORTHO05D004602 5.3e-19 99.4 251 30.7
Oeu052339.1 Olea europaea HOM05D003841 ORTHO05D004602 1.2e-18 98.2 170 37.1
Gohir.D11G294233 Gossypium hirsutum HOM05D003841 ORTHO05D004602 4.5e-18 96.3 218 36.7
Gorai.007G317300 Gossypium raimondii HOM05D003841 ORTHO05D004602 4.5e-18 96.3 218 36.7
Sed0013484 Sechium edule HOM05D003841 ORTHO05D004602 4.5e-18 96.3 268 29.5
CAN.G952.3 Capsicum annuum HOM05D003841 ORTHO05D004602 9.9e-18 95.1 177 39.0
MELO3C016604.2 Cucumis melo HOM05D003841 ORTHO05D004602 9.9e-18 95.1 302 27.8
ClCG10G006140 Citrullus lanatus HOM05D003841 ORTHO05D004602 2.2e-17 94.0 217 32.7
CAN.G22.51 Capsicum annuum HOM05D000121 ORTHO05D000102 3.2e-16 90.1 102 48.0
CsaV3_3G005690 Cucumis sativus L. HOM05D003841 ORTHO05D004602 9.3e-16 88.6 281 27.8
PSO339G6399 Papaver somniferum HOM05D003841 ORTHO05D004602 7.9e-15 85.5 334 29.0
Ah.04g165190 Amaranthus hybridus HOM05D003841 ORTHO05D004602 1.3e-14 84.7 206 36.4
Cfa021072 Carpinus fangiana HOM05D003841 ORTHO05D004602 1.8e-14 84.3 125 43.2
Gohir.A11G281650 Gossypium hirsutum HOM05D003841 ORTHO05D004602 3.0e-14 83.6 209 34.9
PSO384G0968 Papaver somniferum HOM05D003841 ORTHO05D004602 5.1e-14 82.8 336 29.5
BcaB05g22143 Brassica carinata HOM05D003841 ORTHO05D004602 1.1e-13 81.6 311 29.9
Oeu052338.1 Olea europaea HOM05D003841 ORTHO05D004602 2.5e-13 80.5 210 33.3
Sed0016497 Sechium edule HOM05D003841 ORTHO05D004602 3.7e-12 76.6 224 32.1
Cpa.g.sc80.126 Carica papaya HOM05D003841 ORTHO05D004602 1.1e-11 75.1 195 35.9
Os03g0201000 Oryza sativa ssp. japonica HOM05D003841 ORTHO05D049799 9.0e-11 72.0 162 34.0
CAN.G183.13 Capsicum annuum HOM05D003841 ORTHO05D004602 2.6e-10 70.5 197 28.4
Sabra16G0276700 Salix brachista HOM05D006433 ORTHO05D005382 3.8e-09 66.6 118 41.5
VMungo1080G1564 Vigna mungo HOM05D003841 ORTHO05D004602 1.1e-08 65.1 164 32.9
Phvul.005G089400 Phaseolus vulgaris HOM05D003841 ORTHO05D004602 7.1e-08 62.4 75 42.7
PGR031G0981 Punica granatum HOM05D003841 ORTHO05D004602 7.1e-08 62.4 160 31.2
Mapoly0042s0124 Marchantia polymorpha HOM05D002766 ORTHO05D002809 3.5e-07 60.1 364 24.5
Ciclev10005283m.g Citrus clementina HOM05D002766 ORTHO05D002809 7.9e-07 58.9 245 24.9
SEGI_16254 Sequoiadendron giganteum HOM05D002766 ORTHO05D002809 7.9e-07 58.9 346 25.1
SEGI_39337 Sequoiadendron giganteum HOM05D002766 ORTHO05D002809 7.9e-07 58.9 262 27.9
VMungo1027G0001 Vigna mungo HOM05D003841 ORTHO05D004602 1.0e-06 58.5 177 27.1
Pp3c17_23830 Physcomitrium patens HOM05D039964 ORTHO05D002809 1.8e-06 57.8 290 24.8
CAN.G935.4 Capsicum annuum HOM05D003841 ORTHO05D004602 3.0e-06 57.0 97 37.1
CAN.G362.43 Capsicum annuum HOM05D003841 ORTHO05D004602 5.1e-06 56.2 39 64.1


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