Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0331041 Helianthus annuus HOM05D000034 ORTHO05D000037 9.0e-29 129.4 59 100.0
HanXRQChr03g0077651 Helianthus annuus HOM05D000034 ORTHO05D000037 1.2e-17 92.4 59 74.6
Rhsim04G0111300 Rhododendron simsii HOM05D000034 ORTHO05D000037 1.3e-11 72.4 51 62.7
Rhsim04G0145700 Rhododendron simsii HOM05D000034 ORTHO05D000037 1.3e-11 72.4 51 62.7
Rhsim05G0210200 Rhododendron simsii HOM05D000034 ORTHO05D000037 1.3e-11 72.4 51 62.7
Rhsim06G0160000 Rhododendron simsii HOM05D000034 ORTHO05D000285 6.5e-11 70.1 58 55.2
Rhsim05G0142800 Rhododendron simsii HOM05D000034 ORTHO05D000037 8.5e-11 69.7 58 55.2
Rhsim08G0056200 Rhododendron simsii HOM05D000034 ORTHO05D000037 8.5e-11 69.7 58 55.2
HanXRQChr12g0382961 Helianthus annuus HOM05D000034 ORTHO05D000037 1.9e-10 68.6 58 53.4
HanXRQChr10g0279481 Helianthus annuus HOM05D000034 ORTHO05D000285 2.5e-10 68.2 58 55.2
PSO832G4219 Papaver somniferum HOM05D000034 ORTHO05D000037 3.2e-10 67.8 59 52.5
Nn7g38140 Nelumbo nucifera HOM05D000034 ORTHO05D000037 4.2e-10 67.4 58 55.2
SHI20928 Sapria himalayana HOM05D000034 ORTHO05D000037 5.5e-10 67.0 59 54.2
Aqoxy1G03317 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 7.2e-10 66.6 56 57.1
ECA232G1773 Erigeron canadensis HOM05D000034 ORTHO05D000037 1.2e-09 65.9 58 53.4
ECA238G2489 Erigeron canadensis HOM05D000034 ORTHO05D000037 2.1e-09 65.1 58 51.7
HanXRQChr07g0185941 Helianthus annuus HOM05D000034 ORTHO05D000037 2.1e-09 65.1 58 51.7
SHI20142 Sapria himalayana HOM05D000034 ORTHO05D000037 4.7e-09 63.9 58 48.3
Rhsim09G0068200 Rhododendron simsii HOM05D000034 ORTHO05D000037 7.9e-09 63.2 52 55.8
ECA233G5785 Erigeron canadensis HOM05D001746 ORTHO05D001823 1.4e-08 62.4 35 77.1
PSO170G6726 Papaver somniferum HOM05D000034 ORTHO05D000037 1.4e-08 62.4 58 50.0
PSO210G5707 Papaver somniferum HOM05D000034 ORTHO05D000037 1.4e-08 62.4 58 50.0
PSO478G0302 Papaver somniferum HOM05D000034 ORTHO05D000037 1.4e-08 62.4 58 50.0
PSO801G0789 Papaver somniferum HOM05D000034 ORTHO05D000037 1.4e-08 62.4 58 50.0
SHI11206 Sapria himalayana HOM05D000034 ORTHO05D000037 1.4e-08 62.4 58 51.7
SHI03288 Sapria himalayana HOM05D000034 ORTHO05D000037 2.3e-08 61.6 58 53.4
SHI03909 Sapria himalayana HOM05D000034 ORTHO05D000037 2.3e-08 61.6 53 52.8
SHI10898 Sapria himalayana HOM05D000034 ORTHO05D000037 2.3e-08 61.6 58 53.4
PSO063G6700 Papaver somniferum HOM05D000034 ORTHO05D000037 3.0e-08 61.2 58 50.0
PSO210G4734 Papaver somniferum HOM05D000034 ORTHO05D000037 3.0e-08 61.2 58 50.0
PSO541G0934 Papaver somniferum HOM05D000034 ORTHO05D000037 3.0e-08 61.2 58 50.0
PSO782G3468 Papaver somniferum HOM05D000034 ORTHO05D000037 3.0e-08 61.2 58 50.0
SHI10579 Sapria himalayana HOM05D000034 ORTHO05D000037 3.0e-08 61.2 58 51.7
PSO675G1246 Papaver somniferum HOM05D000034 ORTHO05D000037 5.1e-08 60.5 58 50.0
ECA247G4088 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.7e-08 60.1 51 52.9
PSO210G7822 Papaver somniferum HOM05D000034 ORTHO05D000037 8.8e-08 59.7 58 48.3
SHI09403 Sapria himalayana HOM05D000034 ORTHO05D000037 8.8e-08 59.7 53 54.7
SHI02034 Sapria himalayana HOM05D000034 ORTHO05D000037 1.1e-07 59.3 51 56.9
SHI20365 Sapria himalayana HOM05D000034 ORTHO05D000037 1.1e-07 59.3 58 51.7
SHI19211 Sapria himalayana HOM05D000034 ORTHO05D000037 2.0e-07 58.5 56 53.6
ECA233G0323 Erigeron canadensis HOM05D000034 ORTHO05D000037 2.6e-07 58.2 60 45.0
PSO063G4406 Papaver somniferum HOM05D000034 ORTHO05D000037 2.6e-07 58.2 58 48.3
SHI38235 Sapria himalayana HOM05D000034 ORTHO05D000037 2.6e-07 58.2 58 51.7
Aqoxy3G01210 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 4.4e-07 57.4 59 45.8
PSO210G2784 Papaver somniferum HOM05D000034 ORTHO05D000037 7.4e-07 56.6 58 46.6
SHI30049 Sapria himalayana HOM05D000034 ORTHO05D000037 7.4e-07 56.6 59 47.5
Cc08_g05390 Coffea canephora HOM05D000034 ORTHO05D000037 9.7e-07 56.2 57 47.4
ECA246G4856 Erigeron canadensis HOM05D001083 ORTHO05D001637 9.7e-07 56.2 60 43.3
arahy.Tifrunner.gnm1.ann1.W62SBL Arachis hypogaea HOM05D000034 ORTHO05D000037 1.3e-06 55.8 63 41.3
CSS0001254 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.3e-06 55.8 63 42.9
CSS0001522 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.3e-06 55.8 63 42.9
CSS0002925 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.3e-06 55.8 63 42.9
CSS0004838 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.3e-06 55.8 63 42.9
CSS0009060 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.3e-06 55.8 63 42.9
CSS0010359 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.3e-06 55.8 63 42.9
CSS0037429 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.3e-06 55.8 63 42.9
Cc06_g20430 Coffea canephora HOM05D000034 ORTHO05D000037 1.3e-06 55.8 57 45.6
ECA234G2067 Erigeron canadensis HOM05D000034 ORTHO05D000037 1.3e-06 55.8 60 43.3
PSO210G0503 Papaver somniferum HOM05D000034 ORTHO05D000037 1.3e-06 55.8 58 46.6
SHI23572 Sapria himalayana HOM05D008681 ORTHO05D000037 1.3e-06 55.8 39 59.0
CSS0015900 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.7e-06 55.5 63 42.9
CANSAT78G0685 Cannabis sativa HOM05D000034 ORTHO05D000037 1.7e-06 55.5 56 41.1
ECA240G4515 Erigeron canadensis HOM05D000034 ORTHO05D000037 1.7e-06 55.5 59 44.1
Cc02_g10140 Coffea canephora HOM05D000034 ORTHO05D000037 2.2e-06 55.1 57 45.6
ECA233G1549 Erigeron canadensis HOM05D000034 ORTHO05D000037 2.2e-06 55.1 60 43.3
TWI23G0160 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 2.2e-06 55.1 63 41.3
TWI34G1702 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 2.2e-06 55.1 63 41.3
TWI38G2340 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 2.2e-06 55.1 63 41.3
CANSAT78G1769 Cannabis sativa HOM05D000034 ORTHO05D000037 2.8e-06 54.7 56 41.1
PSO017G4039 Papaver somniferum HOM05D000034 ORTHO05D000037 2.8e-06 54.7 58 46.6
RcHm_v2.0_Chr1g0354781 Rosa chinensis HOM05D000034 ORTHO05D000037 2.8e-06 54.7 63 39.7
SHI00882 Sapria himalayana HOM05D000034 ORTHO05D000037 2.8e-06 54.7 51 52.9
CANSAT64G2926 Cannabis sativa HOM05D000034 ORTHO05D000037 3.7e-06 54.3 63 38.1
TWI53G0605 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 3.7e-06 54.3 63 39.7
TWI60G0087 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 3.7e-06 54.3 63 39.7
ECA246G3575 Erigeron canadensis HOM05D001106 ORTHO05D000037 4.8e-06 53.9 58 48.3
HanXRQChr03g0088121 Helianthus annuus HOM05D000034 ORTHO05D000037 4.8e-06 53.9 57 42.1
HanXRQChr07g0199291 Helianthus annuus HOM05D000034 ORTHO05D000037 4.8e-06 53.9 57 42.1
SHI00873 Sapria himalayana HOM05D000034 ORTHO05D000037 4.8e-06 53.9 52 51.9
TWI14G0766 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 4.8e-06 53.9 63 39.7
TWI34G0916 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 4.8e-06 53.9 63 41.3
TWI38G1947 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 4.8e-06 53.9 63 38.1
TWI39G1305 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 4.8e-06 53.9 63 39.7
TWI60G0194 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 4.8e-06 53.9 63 38.1
TAR555G0001 Trochodendron aralioides HOM05D000034 ORTHO05D000037 4.8e-06 53.9 63 42.9
Atru.chr10.1596 Acer truncatum HOM05D000034 ORTHO05D000037 6.3e-06 53.5 63 36.5
CANSAT01G2719 Cannabis sativa HOM05D000034 ORTHO05D000037 6.3e-06 53.5 63 38.1
arahy.Tifrunner.gnm1.ann1.2L6KQP Arachis hypogaea HOM05D000034 ORTHO05D000037 8.2e-06 53.1 61 39.3
arahy.Tifrunner.gnm1.ann1.XSC15N Arachis hypogaea HOM05D000034 ORTHO05D000037 8.2e-06 53.1 59 40.7
HanXRQChr10g0313541 Helianthus annuus HOM05D000034 ORTHO05D000037 8.2e-06 53.1 57 43.9
Lj3g0017061 Lotus japonicus HOM05D000034 ORTHO05D000037 8.2e-06 53.1 63 38.1
LjContig00272g0009285 Lotus japonicus HOM05D000034 ORTHO05D000037 8.2e-06 53.1 63 38.1
SHI08359 Sapria himalayana HOM05D008681 ORTHO05D000037 8.2e-06 53.1 41 56.1
TWI53G0208 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 8.2e-06 53.1 49 46.9


User provided reference genes

Program Settings