Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0330921 Helianthus annuus HOM05D000461 ORTHO05D009768 3.7e-263 911.0 453 100.0
Lsat_1_v5_gn_7_106360 Lactuca sativa HOM05D000461 ORTHO05D009768 1.9e-243 845.5 452 91.4
ECA236G2753 Erigeron canadensis HOM05D000461 ORTHO05D009768 7.0e-230 800.4 452 87.8
Hma1.2p1_1003F.1_g246700 Hydrangea macrophylla HOM05D000461 ORTHO05D009768 2.1e-218 762.3 433 85.9
Dinv08334 Davidia involucrata HOM05D000461 ORTHO05D009768 8.8e-217 756.9 445 82.7
Migut.M00870 Erythranthe guttata HOM05D000461 ORTHO05D009768 9.2e-214 746.9 409 88.3
TAR626G0736 Trochodendron aralioides HOM05D000461 ORTHO05D009768 2.0e-213 745.7 435 82.5
Cc05_g12580 Coffea canephora HOM05D000461 ORTHO05D009768 2.7e-213 745.3 429 84.4
QL93p2023_0115 Quercus lobata HOM05D000461 ORTHO05D009768 7.8e-213 743.8 407 88.2
Prupe.4G188800 Prunus persica HOM05D000461 ORTHO05D009768 1.5e-211 739.6 426 83.6
Nn1g03933 Nelumbo nucifera HOM05D000461 ORTHO05D009768 2.5e-211 738.8 416 85.3
SGA_v2.0_scaffold34G13718 Striga asiatica HOM05D000461 ORTHO05D009768 4.3e-211 738.0 408 87.0
Lj3g0022224 Lotus japonicus HOM05D000461 ORTHO05D009768 7.3e-211 737.3 427 83.1
MD03G1220100 Malus domestica HOM05D000461 ORTHO05D009768 7.3e-211 737.3 427 82.7
Cfa020516 Carpinus fangiana HOM05D000461 ORTHO05D009768 2.8e-210 735.3 405 87.2
Potri.011G127400 Populus trichocarpa HOM05D000461 ORTHO05D009768 6.1e-210 734.2 439 81.5
Lalb_Chr19g0134451 Lupinus albus HOM05D000461 ORTHO05D009768 1.4e-209 733.0 451 80.3
Peaxi162Scf01111g00017 Petunia axillaris HOM05D000461 ORTHO05D009768 1.8e-209 732.6 424 83.0
MSTRG.6849 Avicennia marina HOM05D000461 ORTHO05D009768 3.0e-209 731.9 423 84.9
Sopen07g031690 Solanum pennellii HOM05D000461 ORTHO05D009768 8.9e-209 730.3 424 82.8
PGSC0003DMG400019289 Solanum tuberosum HOM05D000461 ORTHO05D009768 8.9e-209 730.3 433 81.1
VMungo1127G1042 Vigna mungo HOM05D000461 ORTHO05D009768 8.9e-209 730.3 427 83.1
Glyma.12G147900 Glycine max HOM05D000461 ORTHO05D009768 1.2e-208 729.9 430 82.8
RcHm_v2.0_Chr5g0035161 Rosa chinensis HOM05D000461 ORTHO05D009768 1.2e-208 729.9 424 82.5
Rhsim04G0018400 Rhododendron simsii HOM05D000461 ORTHO05D009768 1.5e-208 729.6 451 78.5
arahy.Tifrunner.gnm1.ann1.58XN2N Arachis hypogaea HOM05D000461 ORTHO05D009768 2.0e-208 729.2 444 80.9
Nitab4.5_0002565g0060 Nicotiana tabacum HOM05D000461 ORTHO05D009768 4.4e-208 728.0 422 82.7
Solyc07g063510.3 Solanum lycopersicum HOM05D000461 ORTHO05D009768 4.4e-208 728.0 424 82.5
arahy.Tifrunner.gnm1.ann1.QNW6LA Arachis hypogaea HOM05D000461 ORTHO05D009768 7.5e-208 727.2 444 80.6
Phvul.011G154500 Phaseolus vulgaris HOM05D000461 ORTHO05D009768 9.8e-208 726.9 408 85.8
Cpa.g.sc80.105 Carica papaya HOM05D000461 ORTHO05D009768 8.3e-207 723.8 405 86.2
Gorai.002G075600 Gossypium raimondii HOM05D000461 ORTHO05D009768 1.4e-206 723.0 433 81.8
Manes.03G115700 Manihot esculenta HOM05D000461 ORTHO05D009768 4.1e-206 721.5 429 82.1
QL08p018730 Quercus lobata HOM05D000461 ORTHO05D009768 7.0e-206 720.7 456 78.7
Ah.04g164990 Amaranthus hybridus HOM05D000461 ORTHO05D009768 9.2e-206 720.3 424 82.3
FvH4_3g20850 Fragaria vesca HOM05D000461 ORTHO05D009768 9.2e-206 720.3 423 82.0
TWI39G0712 Tripterygium wilfordii HOM05D000461 ORTHO05D009768 1.6e-205 719.5 408 83.6
Gohir.D01G055500 Gossypium hirsutum HOM05D000461 ORTHO05D009768 2.0e-205 719.2 433 81.1
Sc03g0009640 Simmondsia chinensis HOM05D000461 ORTHO05D009768 2.7e-205 718.8 429 80.9
Sed0023337 Sechium edule HOM05D000461 ORTHO05D009768 4.6e-205 718.0 442 79.4
Medtr8g093250 Medicago truncatula HOM05D000461 ORTHO05D009768 5.9e-205 717.6 421 83.4
Atru.chr2.2833 Acer truncatum HOM05D000461 ORTHO05D009768 7.8e-205 717.2 413 83.5
CAN.G162.98 Capsicum annuum HOM05D000461 ORTHO05D009768 1.3e-204 716.5 424 82.1
MBI02_g10553_MAGBIO Magnolia biondii HOM05D000461 ORTHO05D009768 1.7e-204 716.1 440 80.0
COL.COLO4_09469 Corchorus olitorius HOM05D000461 ORTHO05D009768 5.0e-204 714.5 404 84.2
TPR.G37406 Trifolium pratense HOM05D000461 ORTHO05D009768 1.9e-203 712.6 436 80.3
Ca_17659_v3 Cicer arietinum L. HOM05D000461 ORTHO05D009768 4.3e-203 711.4 423 82.0
Eucgr.H00422 Eucalyptus grandis HOM05D000461 ORTHO05D009768 4.3e-203 711.4 420 81.7
CsaV3_3G044400 Cucumis sativus L. HOM05D000461 ORTHO05D009768 1.2e-202 709.9 441 80.0
vmacro09551 Vaccinium macrocarpon HOM05D000461 ORTHO05D009768 2.8e-202 708.8 455 76.9
AUR62015610 Chenopodium quinoa HOM05D000461 ORTHO05D009768 1.1e-198 696.8 480 74.0
CANSAT11G0348 Cannabis sativa HOM05D000461 ORTHO05D009768 3.2e-198 695.3 479 73.7
HPP92_016586 Vanilla planifolia HOM05D000461 ORTHO05D009768 2.0e-197 692.6 425 77.4
SalBow8G3533 Salvia bowleyana HOM05D000461 ORTHO05D009768 5.0e-196 688.0 387 85.8
DCAR_013076 Daucus carota HOM05D000461 ORTHO05D009768 1.9e-195 686.0 399 84.5
Lj1C852T3 Lonicera japonica HOM05D000461 ORTHO05D009768 1.2e-194 683.3 430 79.3
Haze_09517 Corylus avellana HOM05D000461 ORTHO05D009768 2.8e-194 682.2 404 82.4
Duzib213G0388 Durio zibethinus HOM05D000461 ORTHO05D009768 5.8e-192 674.5 409 80.0
SEGI_18811 Sequoiadendron giganteum HOM05D000461 ORTHO05D009768 5.4e-190 667.9 408 77.0
EL10Ac4g08080 Beta vulgaris HOM05D000461 ORTHO05D009768 9.2e-190 667.2 408 79.9
CiPaw.11G175300 Carya illinoinensis HOM05D000461 ORTHO05D009768 1.2e-189 666.8 368 86.7
Thecc.07G073000 Theobroma cacao HOM05D000461 ORTHO05D009768 3.5e-189 665.2 434 76.3
unitig_747.g21565 Utricularia gibba HOM05D000461 ORTHO05D009768 1.2e-186 656.8 432 75.5
AUR62029323 Chenopodium quinoa HOM05D000461 ORTHO05D009768 1.6e-186 656.4 457 73.3
Nitab4.5_0000297g0070 Nicotiana tabacum HOM05D000461 ORTHO05D009768 1.4e-185 653.3 421 77.2
Zm00001eb069190 Zea mays HOM05D000461 ORTHO05D009768 2.9e-183 645.6 408 76.2
ClCG11G018420 Citrullus lanatus HOM05D000461 ORTHO05D009768 3.2e-182 642.1 423 75.4
Mapoly0032s0012 Marchantia polymorpha HOM05D000461 ORTHO05D009768 3.5e-181 638.6 443 69.5
Pp3c15_6180 Physcomitrium patens HOM05D000461 ORTHO05D009768 2.5e-179 632.5 421 71.0
Hund27427 Selenicereus undatus HOM05D000461 ORTHO05D009768 4.3e-179 631.7 442 71.7
MELO3C018201.2 Cucumis melo HOM05D000461 ORTHO05D009768 5.1e-172 608.2 420 73.6
AagrBONN_evm.TU.Sc2ySwM_344.1693 Anthoceros agrestis HOM05D000461 ORTHO05D009768 3.1e-169 599.0 435 66.0
SMO137G0173 Selaginella moellendorffii HOM05D000461 ORTHO05D009768 1.1e-163 580.5 407 68.6
Oeu019359.1 Olea europaea HOM05D000461 ORTHO05D009768 2.9e-159 565.8 362 77.6
CBR_g31136 Chara braunii HOM05D000461 ORTHO05D009768 1.2e-157 560.5 407 64.9
CDE12G0333 Ceratophyllum demersum HOM05D000461 ORTHO05D009768 1.5e-155 553.5 362 74.0
Psat7g047120 Pisum sativum HOM05D000461 ORTHO05D009768 2.4e-153 546.2 337 79.8
Cre06.g301650 Chlamydomonas reinhardtii HOM05D000461 ORTHO05D009768 2.5e-134 483.0 406 57.6
PRCOL_00003908 Prasinoderma coloniale HOM05D000461 ORTHO05D009768 5.5e-126 455.3 395 58.0
GSVIVG01014420001 Vitis vinifera HOM05D000461 ORTHO05D009768 4.0e-108 396.0 228 82.5
Glyma.06G253602 Glycine max HOM05D000461 ORTHO05D009768 7.2e-102 375.2 243 75.3
Gohir.A01G068201 Gossypium hirsutum HOM05D000461 ORTHO05D009768 2.0e-83 313.9 216 75.5
Zm00001eb291490 Zea mays HOM05D000461 ORTHO05D009768 2.8e-77 293.5 183 77.0
Zm00001eb057620 Zea mays HOM05D000461 ORTHO05D009768 8.1e-77 292.0 183 76.5
Zm00001eb222780 Zea mays HOM05D000461 ORTHO05D009768 8.1e-77 292.0 183 76.5
Zm00001eb308580 Zea mays HOM05D000461 ORTHO05D009768 8.1e-77 292.0 183 76.5
ATR0274G001 Amborella trichopoda HOM05D000461 ORTHO05D009768 3.8e-66 256.5 146 84.2
Gohir.A01G068251 Gossypium hirsutum HOM05D000461 ORTHO05D009768 1.7e-63 247.7 140 84.3
SEGI_34047 Sequoiadendron giganteum HOM05D000461 ORTHO05D009768 6.0e-56 222.6 261 47.1
Os04g0636300 Oryza sativa ssp. japonica HOM05D000461 ORTHO05D009768 2.5e-46 190.7 140 67.1
GSVIVG01014419001 Vitis vinifera HOM05D000461 ORTHO05D009768 2.4e-36 157.5 94 83.0
arahy.Tifrunner.gnm1.ann1.AV15VC Arachis hypogaea HOM05D000296 ORTHO05D000175 7.4e-14 82.8 44 90.9
Lalb_Chr19g0134431 Lupinus albus HOM05D000461 ORTHO05D038317 7.7e-11 72.8 85 52.9
ATR0693G093 Amborella trichopoda HOM05D000461 ORTHO05D038317 1.9e-09 68.2 44 72.7
SEGI_16587 Sequoiadendron giganteum HOM05D000415 ORTHO05D385778 1.4e-07 62.0 47 55.3
Nn1g06725 Nelumbo nucifera HOM05D000461 ORTHO05D009768 4.4e-06 57.0 43 67.4


User provided reference genes

Program Settings