Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0330911 Helianthus annuus HOM05D004820 ORTHO05D005946 8.5e-28 126.3 66 100.0
Lsat_1_v5_gn_5_187781 Lactuca sativa HOM05D004820 ORTHO05D005946 3.4e-08 61.2 47 72.3
Sc05g0005630 Simmondsia chinensis HOM05D004820 ORTHO05D005946 2.2e-07 58.5 52 63.5
TPR.G9917 Trifolium pratense HOM05D004820 ORTHO05D005946 2.9e-07 58.2 45 73.3
Thecc.01G277300 Theobroma cacao HOM05D004820 ORTHO05D005946 6.4e-07 57.0 45 71.1
Lalb_Chr06g0162971 Lupinus albus HOM05D004820 ORTHO05D005946 1.1e-06 56.2 54 57.4
Atru.chr5.1456 Acer truncatum HOM05D004820 ORTHO05D005946 1.9e-06 55.5 52 59.6
Cpa.g.sc52.45 Carica papaya HOM05D004820 ORTHO05D005946 1.9e-06 55.5 52 61.5
Manes.01G206900 Manihot esculenta HOM05D004820 ORTHO05D005946 2.4e-06 55.1 45 66.7
PSO210G1690 Papaver somniferum HOM05D004820 ORTHO05D005946 2.4e-06 55.1 43 72.1
SGA_v2.0_scaffold81G26015 Striga asiatica HOM05D004820 ORTHO05D005946 2.4e-06 55.1 52 57.7
Duzib138G0452 Durio zibethinus HOM05D004820 ORTHO05D005946 3.2e-06 54.7 45 66.7
arahy.Tifrunner.gnm1.ann1.HALK3W Arachis hypogaea HOM05D004820 ORTHO05D005946 4.1e-06 54.3 45 68.9
arahy.Tifrunner.gnm1.ann1.JHLY8X Arachis hypogaea HOM05D004820 ORTHO05D005946 4.1e-06 54.3 45 68.9
arahy.Tifrunner.gnm1.ann1.NQ54M2 Arachis hypogaea HOM05D004820 ORTHO05D005946 4.1e-06 54.3 45 68.9
arahy.Tifrunner.gnm1.ann1.X2D3U2 Arachis hypogaea HOM05D004820 ORTHO05D005946 4.1e-06 54.3 45 68.9
Gohir.A08G186300 Gossypium hirsutum HOM05D004820 ORTHO05D005946 4.1e-06 54.3 44 68.2
Gohir.D08G204400 Gossypium hirsutum HOM05D004820 ORTHO05D005946 4.1e-06 54.3 44 68.2
Gorai.004G216400 Gossypium raimondii HOM05D004820 ORTHO05D005946 4.1e-06 54.3 44 68.2
Nn4g26288 Nelumbo nucifera HOM05D004820 ORTHO05D005946 4.1e-06 54.3 52 57.7
Glyma.03G155000 Glycine max HOM05D004820 ORTHO05D005946 5.4e-06 53.9 45 66.7
Glyma.19G157200 Glycine max HOM05D004820 ORTHO05D005946 5.4e-06 53.9 54 57.4
THA.LOC104801242 Tarenaya hassleriana HOM05D004820 ORTHO05D005946 5.4e-06 53.9 41 75.6
Potri.005G210600 Populus trichocarpa HOM05D004820 ORTHO05D005946 7.0e-06 53.5 45 66.7
Sabra05G0160800 Salix brachista HOM05D004820 ORTHO05D005946 7.0e-06 53.5 45 66.7


User provided reference genes

Program Settings