Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0330871 Helianthus annuus HOM05D000461 ORTHO05D009042 4.2e-125 451.4 240 100.0
Lsat_1_v5_gn_7_106400 Lactuca sativa HOM05D000461 ORTHO05D009042 1.6e-76 290.0 244 64.3
ECA236G1699 Erigeron canadensis HOM05D003383 ORTHO05D003890 6.4e-57 224.9 142 77.5
CiPaw.11G175500 Carya illinoinensis HOM05D000461 ORTHO05D009042 2.1e-55 219.9 175 67.4
Cfa020516 Carpinus fangiana HOM05D000461 ORTHO05D009768 9.6e-53 211.1 175 62.3
Ciclev10009303m.g Citrus clementina HOM05D000461 ORTHO05D009042 1.6e-52 210.3 249 55.0
Dinv08335 Davidia involucrata HOM05D000461 ORTHO05D009042 2.8e-52 209.5 172 61.0
QL08p018706 Quercus lobata HOM05D000461 ORTHO05D009042 3.1e-51 206.1 174 63.8
Cc05_g12620 Coffea canephora HOM05D000461 ORTHO05D009042 2.0e-50 203.4 171 64.9
Cpa.g.sc80.106 Carica papaya HOM05D000461 ORTHO05D009042 3.4e-50 202.6 184 62.0
QL93p2023_0091 Quercus lobata HOM05D000461 ORTHO05D009042 3.4e-50 202.6 174 62.6
MD11G1238100 Malus domestica HOM05D000461 ORTHO05D009042 4.5e-50 202.2 220 54.1
Potri.001G405800 Populus trichocarpa HOM05D000461 ORTHO05D009042 7.6e-50 201.4 181 61.3
Hma1.2p1_1003F.1_g246730 Hydrangea macrophylla HOM05D000461 ORTHO05D009042 9.9e-50 201.1 189 58.7
Dinv22369 Davidia involucrata HOM05D000461 ORTHO05D009042 1.3e-49 200.7 261 48.7
CSS0025788 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D009042 2.9e-49 199.5 172 59.3
THA.LOC104799911 Tarenaya hassleriana HOM05D000461 ORTHO05D009042 3.8e-49 199.1 171 62.0
Atru.chr2.2831 Acer truncatum HOM05D000461 ORTHO05D009042 8.4e-49 198.0 215 54.4
PGR031G2091 Punica granatum HOM05D000461 ORTHO05D009042 1.1e-48 197.6 179 57.5
AT4G27390 Arabidopsis thaliana HOM05D000461 ORTHO05D009042 1.9e-48 196.8 198 53.5
Nitab4.5_0000297g0040 Nicotiana tabacum HOM05D000461 ORTHO05D009042 3.2e-48 196.1 241 50.2
Eucgr.F03352 Eucalyptus grandis HOM05D000461 ORTHO05D009042 4.2e-48 195.7 196 55.1
Prupe.4G189000 Prunus persica HOM05D000461 ORTHO05D009042 5.4e-48 195.3 173 60.1
COL.COLO4_09469 Corchorus olitorius HOM05D000461 ORTHO05D009768 1.6e-47 193.7 193 57.0
GSVIVG01014422001 Vitis vinifera HOM05D000461 ORTHO05D009042 2.1e-47 193.4 145 60.7
MD03G1219800 Malus domestica HOM05D000461 ORTHO05D009042 2.7e-47 193.0 145 63.4
Solyc07g063530.3 Solanum lycopersicum HOM05D000461 ORTHO05D009042 3.5e-47 192.6 240 48.3
TPR.G32851 Trifolium pratense HOM05D000461 ORTHO05D009042 3.5e-47 192.6 232 52.6
Ca_29614_v3 Cicer arietinum L. HOM05D000461 ORTHO05D009042 4.6e-47 192.2 175 57.7
TWI39G0508 Tripterygium wilfordii HOM05D000461 ORTHO05D009042 4.6e-47 192.2 191 56.0
Ah.04g164980 Amaranthus hybridus HOM05D000461 ORTHO05D009042 7.9e-47 191.4 190 53.2
Aqoxy1G02771 Aquilegia oxysepala HOM05D000461 ORTHO05D009042 1.0e-46 191.0 223 49.8
CANSAT11G1238 Cannabis sativa HOM05D000461 ORTHO05D009042 1.0e-46 191.0 221 48.9
Duzib213G0849 Durio zibethinus HOM05D000461 ORTHO05D009042 1.0e-46 191.0 200 54.5
Psat5g246400 Pisum sativum HOM05D000461 ORTHO05D009042 1.0e-46 191.0 224 51.3
Sopen07g031710 Solanum pennellii HOM05D000461 ORTHO05D009042 1.0e-46 191.0 143 62.9
FAN21G1502 Fragaria x ananassa HOM05D000461 ORTHO05D009042 1.8e-46 190.3 173 59.0
Glyma.13G281300 Glycine max HOM05D000461 ORTHO05D009042 1.8e-46 190.3 173 61.3
MSTRG.15210 Avicennia marina HOM05D000461 ORTHO05D009042 3.0e-46 189.5 255 47.8
DCAR_013076 Daucus carota HOM05D000461 ORTHO05D009768 3.9e-46 189.1 174 58.0
BcaC06g32696 Brassica carinata HOM05D000461 ORTHO05D009042 5.1e-46 188.7 172 56.4
Medtr2g080290 Medicago truncatula HOM05D000461 ORTHO05D009042 5.1e-46 188.7 171 57.9
Glyma.12G220000 Glycine max HOM05D000461 ORTHO05D009042 6.7e-46 188.3 172 60.5
RcHm_v2.0_Chr5g0035191 Rosa chinensis HOM05D000461 ORTHO05D009042 6.7e-46 188.3 173 58.4
ClCG10G006570 Citrullus lanatus HOM05D000461 ORTHO05D009042 1.1e-45 187.6 187 59.9
Thhalv10026109m.g Eutrema salsugineum HOM05D000461 ORTHO05D009042 1.1e-45 187.6 198 51.0
CsaV3_3G006020 Cucumis sativus L. HOM05D000461 ORTHO05D009042 1.5e-45 187.2 233 51.9
Lalb_Chr01g0017011 Lupinus albus HOM05D000461 ORTHO05D009042 1.5e-45 187.2 236 49.6
Nn1g03924 Nelumbo nucifera HOM05D000461 ORTHO05D009042 1.5e-45 187.2 190 55.3
BolC7t46022H Brassica oleracea HOM05D000461 ORTHO05D009042 1.9e-45 186.8 172 55.8
Manes.03G116000 Manihot esculenta HOM05D000461 ORTHO05D009042 1.9e-45 186.8 233 49.8
CARHR235060 Cardamine hirsuta HOM05D000461 ORTHO05D009042 2.5e-45 186.4 173 54.9
Thecc.07G072900 Theobroma cacao HOM05D000461 ORTHO05D009042 3.3e-45 186.0 251 48.2
A03p57230 Brassica napus HOM05D000461 ORTHO05D009042 4.3e-45 185.7 192 52.6
BraA03t14789Z Brassica rapa HOM05D000461 ORTHO05D009042 4.3e-45 185.7 192 52.6
Phvul.005G086500 Phaseolus vulgaris HOM05D000461 ORTHO05D009042 4.3e-45 185.7 244 49.2
Sabra16G0269500 Salix brachista HOM05D000461 ORTHO05D009042 5.6e-45 185.3 274 45.3
C07p55420 Brassica napus HOM05D000461 ORTHO05D009042 7.4e-45 184.9 172 55.2
TAR626G1568 Trochodendron aralioides HOM05D000461 ORTHO05D009042 7.4e-45 184.9 159 58.5
Sed0008890 Sechium edule HOM05D000461 ORTHO05D009042 1.3e-44 184.1 176 58.5
FAN11G0265 Fragaria x ananassa HOM05D000461 ORTHO05D009042 1.6e-44 183.7 180 57.8
AL7G25410 Arabidopsis lyrata HOM05D000461 ORTHO05D009042 2.1e-44 183.3 200 52.0
Lj3g0027305 Lotus japonicus HOM05D000461 ORTHO05D009042 6.2e-44 181.8 195 55.4
Aa31LG5G10130 Aethionema arabicum HOM05D000461 ORTHO05D009042 8.1e-44 181.4 179 57.0
FAN16G2536 Fragaria x ananassa HOM05D000461 ORTHO05D009042 1.1e-43 181.0 178 57.3
Sp7g25320 Schrenkiella parvula HOM05D000461 ORTHO05D009042 1.1e-43 181.0 203 49.8
CDE05G1014 Ceratophyllum demersum HOM05D000461 ORTHO05D009042 1.4e-43 180.6 173 54.3
Migut.M00872 Erythranthe guttata HOM05D000461 ORTHO05D009042 1.8e-43 180.3 230 47.0
Sc03g0009630 Simmondsia chinensis HOM05D000461 ORTHO05D009042 1.8e-43 180.3 176 51.7
Carub.0007s1348 Capsella rubella HOM05D000461 ORTHO05D009042 6.9e-43 178.3 173 53.8
Rhsim04G0018200 Rhododendron simsii HOM05D000461 ORTHO05D009042 9.0e-43 177.9 230 45.7
Gohir.D01G055600 Gossypium hirsutum HOM05D000461 ORTHO05D009042 1.2e-42 177.6 143 58.7
Sabra16G0267700 Salix brachista HOM05D000461 ORTHO05D009042 1.5e-42 177.2 277 44.0
Gohir.A01G068300 Gossypium hirsutum HOM05D000461 ORTHO05D009042 2.0e-42 176.8 143 58.7
SGA_v2.0_scaffold73G24312 Striga asiatica HOM05D000461 ORTHO05D009042 2.0e-42 176.8 240 49.6
Lalb_Chr25g0286691 Lupinus albus HOM05D000461 ORTHO05D009042 3.4e-42 176.0 229 46.7
Gorai.002G075700 Gossypium raimondii HOM05D000461 ORTHO05D009042 5.8e-42 175.3 147 59.9
Nitab4.5_0002565g0040 Nicotiana tabacum HOM05D000461 ORTHO05D009042 1.7e-41 173.7 183 52.5
PSO210G3087 Papaver somniferum HOM05D000461 ORTHO05D009042 1.7e-41 173.7 232 48.3
Actinidia25643 Actinidia chinensis HOM05D000461 ORTHO05D009042 2.9e-41 172.9 179 56.4
arahy.Tifrunner.gnm1.ann1.20QRXD Arachis hypogaea HOM05D000461 ORTHO05D009042 1.9e-40 170.2 205 52.7
Oeu005436.1 Olea europaea HOM05D000461 ORTHO05D009042 9.3e-40 167.9 125 61.6
EL10Ac4g08079 Beta vulgaris HOM05D000461 ORTHO05D009042 2.1e-39 166.8 232 42.2
arahy.Tifrunner.gnm1.ann1.IDBP1F Arachis hypogaea HOM05D000461 ORTHO05D009042 6.0e-39 165.2 204 52.5
Actinidia18752 Actinidia chinensis HOM05D000461 ORTHO05D009042 8.7e-38 161.4 234 46.2
PSO832G2223 Papaver somniferum HOM05D000461 ORTHO05D009042 1.1e-37 161.0 184 53.3
AUR62029322 Chenopodium quinoa HOM05D000461 ORTHO05D009042 9.6e-37 157.9 180 47.8
Peaxi162Scf01216g00058 Petunia axillaris HOM05D000461 ORTHO05D009042 5.3e-35 152.1 211 46.4
FvH4_3g20860 Fragaria vesca HOM05D000461 ORTHO05D009042 2.5e-32 143.3 158 53.2
AUR62015609 Chenopodium quinoa HOM05D000461 ORTHO05D009042 3.2e-32 142.9 256 40.6
Zm00001eb352790 Zea mays HOM05D000461 ORTHO05D009042 9.3e-32 141.4 149 48.3
vmacro09553 Vaccinium macrocarpon HOM05D000461 ORTHO05D009042 2.1e-31 140.2 298 36.9
Os05g0502500 Oryza sativa ssp. japonica HOM05D000461 ORTHO05D009042 2.7e-31 139.8 178 44.9
Actinidia35273 Actinidia chinensis HOM05D000461 ORTHO05D009042 5.1e-30 135.6 172 49.4
Hund28424 Selenicereus undatus HOM05D000461 ORTHO05D009042 1.4e-27 127.5 197 42.6
Hund28429 Selenicereus undatus HOM05D000461 ORTHO05D009042 1.4e-27 127.5 197 42.6
HPP92_001809 Vanilla planifolia HOM05D000461 ORTHO05D009042 3.1e-27 126.3 128 46.1
RcHm_v2.0_Chr5g0035211 Rosa chinensis HOM05D000461 ORTHO05D009042 3.4e-26 122.9 110 53.6
PGSC0003DMG400019287 Solanum tuberosum HOM05D000461 ORTHO05D009042 5.0e-25 119.0 100 52.0
MELO3C016549.2 Cucumis melo HOM05D000461 ORTHO05D009042 1.2e-23 114.4 125 48.8
Mapoly0059s0039 Marchantia polymorpha HOM05D000461 ORTHO05D009042 1.2e-23 114.4 155 38.7
SMO347G0332 Selaginella moellendorffii HOM05D000461 ORTHO05D009042 1.3e-22 110.9 169 39.6
Hma1.2p1_1003F.1_g246740 Hydrangea macrophylla HOM05D000461 ORTHO05D009042 1.8e-22 110.5 87 55.2
Haze_09518 Corylus avellana HOM05D000461 ORTHO05D009042 2.5e-21 106.7 197 39.1
Pp3c5_7600 Physcomitrium patens HOM05D000461 ORTHO05D009042 1.4e-19 100.9 160 38.1
CSS0035681 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D009042 2.4e-19 100.1 92 62.0
CBR_g3118 Chara braunii HOM05D000461 ORTHO05D009042 9.1e-19 98.2 147 37.4
VMungo1080G0679 Vigna mungo HOM05D000461 ORTHO05D009042 8.5e-17 91.7 87 54.0
Manes.15G162800 Manihot esculenta HOM05D000461 ORTHO05D009042 3.2e-16 89.7 88 52.3
ATR0693G207 Amborella trichopoda HOM05D000461 ORTHO05D009042 2.7e-15 86.7 85 54.1
unitig_85.g27405 Utricularia gibba HOM05D000461 ORTHO05D009042 2.2e-09 67.0 143 34.3


User provided reference genes

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