Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0330281 Helianthus annuus HOM05D004627 ORTHO05D005745 5.0e-54 214.2 106 100.0
HanXRQChr09g0275371 Helianthus annuus HOM05D004627 ORTHO05D005745 2.8e-49 198.4 100 96.0
ECA232G3019 Erigeron canadensis HOM05D004627 ORTHO05D005745 1.5e-42 176.0 100 84.0
Lsat_1_v5_gn_4_103420 Lactuca sativa HOM05D004627 ORTHO05D005745 2.0e-42 175.6 107 79.4
HanXRQChr16g0501021 Helianthus annuus HOM05D004627 ORTHO05D005745 2.4e-40 168.7 106 78.3
Lj5A62T32 Lonicera japonica HOM05D004627 ORTHO05D005745 6.6e-38 160.6 100 79.0
Prupe.3G073400 Prunus persica HOM05D004627 ORTHO05D005745 8.6e-38 160.2 99 76.8
GSVIVG01017132001 Vitis vinifera HOM05D004627 ORTHO05D005745 1.5e-37 159.5 99 76.8
Cfa002052 Carpinus fangiana HOM05D004627 ORTHO05D005745 5.6e-37 157.5 99 74.7
Dinv30525 Davidia involucrata HOM05D004627 ORTHO05D005745 9.5e-37 156.8 100 74.0
Oeu033491.1 Olea europaea HOM05D004627 ORTHO05D005745 9.5e-37 156.8 98 76.5
Haze_16452 Corylus avellana HOM05D004627 ORTHO05D005745 1.2e-36 156.4 99 73.7
FAN09G4341 Fragaria x ananassa HOM05D004627 ORTHO05D005745 2.1e-36 155.6 99 73.7
RcHm_v2.0_Chr2g0137571 Rosa chinensis HOM05D004627 ORTHO05D005745 2.1e-36 155.6 99 73.7
CiPaw.01G240400 Carya illinoinensis HOM05D004627 ORTHO05D005745 2.8e-36 155.2 99 73.7
Migut.I00850 Erythranthe guttata HOM05D004627 ORTHO05D005745 4.7e-36 154.5 98 74.5
FvH4_6g30940 Fragaria vesca HOM05D004627 ORTHO05D005745 1.0e-35 153.3 99 72.7
FAN02G1252 Fragaria x ananassa HOM05D004627 ORTHO05D005745 1.0e-35 153.3 99 72.7
FAN05G4220 Fragaria x ananassa HOM05D004627 ORTHO05D005745 1.0e-35 153.3 99 72.7
FAN14G2812 Fragaria x ananassa HOM05D004627 ORTHO05D005745 1.0e-35 153.3 99 72.7
MD00G1200900 Malus domestica HOM05D004627 ORTHO05D005745 1.0e-35 153.3 99 73.7
MD17G1197500 Malus domestica HOM05D004627 ORTHO05D005745 1.0e-35 153.3 99 73.7
QL05p025307 Quercus lobata HOM05D004627 ORTHO05D005745 1.0e-35 153.3 99 73.7
SalBow2G3381 Salvia bowleyana HOM05D004627 ORTHO05D005745 1.0e-35 153.3 98 74.5
Cc04_g03560 Coffea canephora HOM05D004627 ORTHO05D005745 1.8e-35 152.5 98 74.5
CANSAT56G0577 Cannabis sativa HOM05D004627 ORTHO05D005745 2.3e-35 152.1 99 72.7
Eucgr.J03011 Eucalyptus grandis HOM05D004627 ORTHO05D005745 2.3e-35 152.1 99 74.7
PGR102G1515 Punica granatum HOM05D004627 ORTHO05D005745 4.0e-35 151.4 99 71.7
Medtr2g102283 Medicago truncatula HOM05D004627 ORTHO05D005745 6.8e-35 150.6 99 70.7
Nn8g39259 Nelumbo nucifera HOM05D004627 ORTHO05D005745 6.8e-35 150.6 99 72.7
Psat1g004520 Pisum sativum HOM05D004627 ORTHO05D005745 6.8e-35 150.6 99 71.7
Potri.001G179000 Populus trichocarpa HOM05D004627 ORTHO05D005745 6.8e-35 150.6 99 72.7
Lj3g0017413 Lotus japonicus HOM05D004627 ORTHO05D005745 8.9e-35 150.2 101 71.3
Sabra01G0147900 Salix brachista HOM05D004627 ORTHO05D005745 8.9e-35 150.2 99 72.7
Eucgr.F03009 Eucalyptus grandis HOM05D004627 ORTHO05D005745 1.2e-34 149.8 99 69.7
Nn2g11815 Nelumbo nucifera HOM05D004627 ORTHO05D005745 1.5e-34 149.4 99 71.7
Cpa.g.sc253.2 Carica papaya HOM05D004627 ORTHO05D005745 2.0e-34 149.1 98 71.4
Glyma.15G013400 Glycine max HOM05D004627 ORTHO05D005745 2.6e-34 148.7 99 72.7
Ciclev10024994m.g Citrus clementina HOM05D004627 ORTHO05D005745 3.4e-34 148.3 99 71.7
Gorai.009G132600 Gossypium raimondii HOM05D004627 ORTHO05D005745 3.4e-34 148.3 99 71.7
Nitab4.5_0003885g0070 Nicotiana tabacum HOM05D004627 ORTHO05D005745 3.4e-34 148.3 98 72.4
Thecc.06G083900 Theobroma cacao HOM05D004627 ORTHO05D005745 3.4e-34 148.3 99 71.7
Glyma.13G360500 Glycine max HOM05D004627 ORTHO05D005745 4.4e-34 147.9 99 71.7
Manes.11G052170 Manihot esculenta HOM05D004627 ORTHO05D005745 4.4e-34 147.9 99 70.7
Nitab4.5_0006801g0030 Nicotiana tabacum HOM05D004627 ORTHO05D005745 4.4e-34 147.9 98 71.4
TWI18G0348 Tripterygium wilfordii HOM05D004627 ORTHO05D005745 4.4e-34 147.9 99 69.7
Lalb_Chr24g0395771 Lupinus albus HOM05D004627 ORTHO05D005745 5.7e-34 147.5 98 72.4
unitig_21.g20514 Utricularia gibba HOM05D004627 ORTHO05D005745 5.7e-34 147.5 98 69.4
CDE02G4618 Ceratophyllum demersum HOM05D004627 ORTHO05D005745 7.5e-34 147.1 99 70.7
Sopen03g039200 Solanum pennellii HOM05D004627 ORTHO05D005745 7.5e-34 147.1 98 71.4
PGSC0003DMG401002640 Solanum tuberosum HOM05D004627 ORTHO05D005745 7.5e-34 147.1 98 71.4
MELO3C012953.2 Cucumis melo HOM05D004627 ORTHO05D005745 9.8e-34 146.7 99 68.7
Gohir.A02G122400 Gossypium hirsutum HOM05D004627 ORTHO05D005745 9.8e-34 146.7 99 70.7
Gohir.D03G074100 Gossypium hirsutum HOM05D004627 ORTHO05D005745 9.8e-34 146.7 99 70.7
Peaxi162Scf00015g00330 Petunia axillaris HOM05D004627 ORTHO05D005745 9.8e-34 146.7 98 71.4
Solyc03g120310.3 Solanum lycopersicum HOM05D004627 ORTHO05D005745 9.8e-34 146.7 98 70.4
HPP92_003643 Vanilla planifolia HOM05D004627 ORTHO05D005745 9.8e-34 146.7 99 70.7
Gohir.A05G127500 Gossypium hirsutum HOM05D004627 ORTHO05D005745 1.3e-33 146.4 99 70.7
Gohir.D05G128400 Gossypium hirsutum HOM05D004627 ORTHO05D005745 1.3e-33 146.4 99 71.7
Atru.chr1.3229 Acer truncatum HOM05D004627 ORTHO05D005745 1.7e-33 146.0 99 72.7
Ca_01108_v3 Cicer arietinum L. HOM05D004627 ORTHO05D005745 1.7e-33 146.0 99 69.7
Phvul.005G172300 Phaseolus vulgaris HOM05D004627 ORTHO05D005745 1.7e-33 146.0 99 69.7
Sc10g0007450 Simmondsia chinensis HOM05D004627 ORTHO05D005745 1.7e-33 146.0 100 69.0
Actinidia15828 Actinidia chinensis HOM05D004627 ORTHO05D005745 2.2e-33 145.6 99 71.7
CSS0033891 Camellia sinensis var. sinensis HOM05D004627 ORTHO05D005745 2.2e-33 145.6 99 69.7
DCAR_021317 Daucus carota HOM05D004627 ORTHO05D005745 2.9e-33 145.2 97 73.2
Gorai.002G058400 Gossypium raimondii HOM05D004627 ORTHO05D005745 2.9e-33 145.2 99 69.7
Aa31LG8G3110 Aethionema arabicum HOM05D004627 ORTHO05D005745 3.7e-33 144.8 99 70.7
ClCG07G012970 Citrullus lanatus HOM05D004627 ORTHO05D005745 3.7e-33 144.8 99 67.7
CAN.G438.55 Capsicum annuum HOM05D004627 ORTHO05D005745 4.9e-33 144.4 98 70.4
Sed0021846 Sechium edule HOM05D004627 ORTHO05D005745 4.9e-33 144.4 99 69.7
TAR624G0215 Trochodendron aralioides HOM05D004627 ORTHO05D005745 4.9e-33 144.4 99 69.7
vmacro18926 Vaccinium macrocarpon HOM05D004627 ORTHO05D005745 4.9e-33 144.4 99 73.7
arahy.Tifrunner.gnm1.ann1.LL8CI2 Arachis hypogaea HOM05D004627 ORTHO05D005745 6.4e-33 144.1 99 70.7
arahy.Tifrunner.gnm1.ann1.ZNJT9X Arachis hypogaea HOM05D004627 ORTHO05D005745 6.4e-33 144.1 99 70.7
COL.COLO4_30343 Corchorus olitorius HOM05D004627 ORTHO05D005745 6.4e-33 144.1 99 69.7
Gohir.A10G079400 Gossypium hirsutum HOM05D004627 ORTHO05D005745 8.3e-33 143.7 96 70.8
Gohir.D10G072100 Gossypium hirsutum HOM05D004627 ORTHO05D005745 8.3e-33 143.7 96 70.8
Gorai.011G077500 Gossypium raimondii HOM05D004627 ORTHO05D005745 8.3e-33 143.7 96 70.8
Rhsim08G0219700 Rhododendron simsii HOM05D004627 ORTHO05D005745 8.3e-33 143.7 99 72.7
CsaV3_3G026250 Cucumis sativus L. HOM05D004627 ORTHO05D005745 1.1e-32 143.3 98 69.4
SGA_v2.0_scaffold5G02627 Striga asiatica HOM05D004627 ORTHO05D005745 1.1e-32 143.3 98 67.3
Actinidia01796 Actinidia chinensis HOM05D004627 ORTHO05D005745 1.4e-32 142.9 99 69.7
DCAR_016226 Daucus carota HOM05D004627 ORTHO05D005745 1.4e-32 142.9 99 69.7
Thhalv10011288m.g Eutrema salsugineum HOM05D004627 ORTHO05D005745 1.8e-32 142.5 99 69.7
Carub.0001s4141 Capsella rubella HOM05D004627 ORTHO05D005745 2.4e-32 142.1 102 67.6
THA.LOC104818012 Tarenaya hassleriana HOM05D004627 ORTHO05D005745 3.2e-32 141.7 99 68.7
Aqoxy7G01825 Aquilegia oxysepala HOM05D004627 ORTHO05D005745 4.1e-32 141.4 100 66.0
BcaB02g10992 Brassica carinata HOM05D004627 ORTHO05D005745 9.2e-32 140.2 99 68.7
PSO063G7267 Papaver somniferum HOM05D004627 ORTHO05D005745 9.2e-32 140.2 99 65.7
BcaC08g43994 Brassica carinata HOM05D004627 ORTHO05D005745 1.2e-31 139.8 99 68.7
C06p14000 Brassica napus HOM05D004627 ORTHO05D005745 1.2e-31 139.8 99 68.7
BolC6t36577H Brassica oleracea HOM05D004627 ORTHO05D005745 1.2e-31 139.8 99 68.7
AUR62016434 Chenopodium quinoa HOM05D004627 ORTHO05D005745 1.2e-31 139.8 99 65.7
Thhalv10020188m.g Eutrema salsugineum HOM05D004627 ORTHO05D005745 1.2e-31 139.8 99 68.7
A05p19010 Brassica napus HOM05D004627 ORTHO05D005745 1.6e-31 139.4 99 68.7
A05p33520 Brassica napus HOM05D004627 ORTHO05D005745 1.6e-31 139.4 99 68.7
BraA05t20798Z Brassica rapa HOM05D004627 ORTHO05D005745 1.6e-31 139.4 99 68.7
CDE04G1816 Ceratophyllum demersum HOM05D004627 ORTHO05D005745 1.6e-31 139.4 99 66.7
Sp3g14260 Schrenkiella parvula HOM05D004627 ORTHO05D005745 1.6e-31 139.4 99 68.7
AL1G60680 Arabidopsis lyrata HOM05D004627 ORTHO05D005745 2.0e-31 139.0 99 67.7
BcaB06g25694 Brassica carinata HOM05D004627 ORTHO05D005745 2.0e-31 139.0 99 68.7
AUR62011619 Chenopodium quinoa HOM05D004627 ORTHO05D005745 2.0e-31 139.0 99 64.6
AT1G52420 Arabidopsis thaliana HOM05D004627 ORTHO05D005745 3.5e-31 138.3 99 67.7
CARHR091080 Cardamine hirsuta HOM05D004627 ORTHO05D005745 4.6e-31 137.9 99 67.7
PSO782G5143 Papaver somniferum HOM05D004627 ORTHO05D005745 5.9e-31 137.5 99 63.6
AT3G15940 Arabidopsis thaliana HOM05D004627 ORTHO05D005745 7.8e-31 137.1 99 65.7
BcaC05g28923 Brassica carinata HOM05D004627 ORTHO05D005745 1.3e-30 136.3 99 67.7
C05p50500 Brassica napus HOM05D004627 ORTHO05D005745 1.3e-30 136.3 99 67.7
BolC5t33797H Brassica oleracea HOM05D004627 ORTHO05D005745 1.3e-30 136.3 99 67.7
BraA05t22173Z Brassica rapa HOM05D004627 ORTHO05D005745 1.3e-30 136.3 99 66.7
arahy.Tifrunner.gnm1.ann1.JYD53Y Arachis hypogaea HOM05D004627 ORTHO05D005745 1.7e-30 136.0 99 64.6
Carub.0003s1568 Capsella rubella HOM05D004627 ORTHO05D005745 1.7e-30 136.0 99 66.7
AL3G28570 Arabidopsis lyrata HOM05D004627 ORTHO05D005745 2.3e-30 135.6 99 66.7
arahy.Tifrunner.gnm1.ann1.4HBL4W Arachis hypogaea HOM05D004627 ORTHO05D005745 2.3e-30 135.6 99 64.6
EL10Ac9g21984 Beta vulgaris HOM05D004627 ORTHO05D005745 2.3e-30 135.6 99 65.7
Sp1g39040 Schrenkiella parvula HOM05D004627 ORTHO05D005745 2.3e-30 135.6 99 66.7
CARHR042560 Cardamine hirsuta HOM05D004627 ORTHO05D005745 3.0e-30 135.2 99 67.7
Phvul.010G151400 Phaseolus vulgaris HOM05D004627 ORTHO05D005745 5.0e-30 134.4 99 65.7
Ah.01g021200 Amaranthus hybridus HOM05D004627 ORTHO05D005745 6.6e-30 134.0 99 64.6
Hund00604 Selenicereus undatus HOM05D004627 ORTHO05D005745 3.3e-29 131.7 99 62.6
ATR0037G016 Amborella trichopoda HOM05D004627 ORTHO05D005745 1.6e-28 129.4 95 63.2
Lj3g0022997 Lotus japonicus HOM05D004627 ORTHO05D005745 2.1e-28 129.0 99 66.7
Glyma.07G034500 Glycine max HOM05D004627 ORTHO05D005745 6.2e-28 127.5 99 62.6
Glyma.08G207600 Glycine max HOM05D004627 ORTHO05D005745 6.2e-28 127.5 99 63.6
PGR102G1468 Punica granatum HOM05D004627 ORTHO05D005745 1.0e-27 126.7 99 62.6
Medtr4g011910 Medicago truncatula HOM05D004627 ORTHO05D005745 1.2e-26 123.2 99 65.7
VMungo0331G0981 Vigna mungo HOM05D004627 ORTHO05D005745 1.5e-26 122.9 98 60.2
Psat7g253120 Pisum sativum HOM05D004627 ORTHO05D005745 2.6e-26 122.1 99 62.6
Ca_20401_v3 Cicer arietinum L. HOM05D004627 ORTHO05D005745 3.2e-24 115.2 74 71.6
vmacro18928 Vaccinium macrocarpon HOM05D004627 ORTHO05D005745 4.1e-24 114.8 100 63.0
TPR.G24156 Trifolium pratense HOM05D004627 ORTHO05D005745 1.6e-23 112.8 93 61.3
Medtr4g069840 Medicago truncatula HOM05D004627 ORTHO05D005745 3.5e-23 111.7 99 58.6
HanXRQChr01g0007461 Helianthus annuus HOM05D004627 ORTHO05D005745 1.0e-22 110.2 54 94.4
vmacro18927 Vaccinium macrocarpon HOM05D004627 ORTHO05D005745 3.9e-22 108.2 101 58.4
TPR.G22966 Trifolium pratense HOM05D004627 ORTHO05D005745 5.0e-22 107.8 99 54.5
Rhsim08G0219100 Rhododendron simsii HOM05D004627 ORTHO05D005745 3.6e-20 101.7 94 59.6
Rhsim08G0219000 Rhododendron simsii HOM05D004627 ORTHO05D005745 6.2e-20 100.9 95 56.8
Rhsim08G0219400 Rhododendron simsii HOM05D004627 ORTHO05D005745 1.1e-19 100.1 94 56.4
Rhsim08G0219300 Rhododendron simsii HOM05D004627 ORTHO05D005745 1.8e-19 99.4 94 59.6
AagrBONN_evm.TU.Sc2ySwM_362.2473 Anthoceros agrestis HOM05D004627 ORTHO05D005745 2.0e-18 95.9 97 50.5
Rhsim08G0219600 Rhododendron simsii HOM05D004627 ORTHO05D005745 2.0e-18 95.9 94 54.3
Mapoly0005s0028 Marchantia polymorpha HOM05D004627 ORTHO05D005745 1.9e-16 89.4 98 46.9
SMO147G0020 Selaginella moellendorffii HOM05D004627 ORTHO05D005745 1.0e-14 83.6 77 48.1


User provided reference genes

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