Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0330171 Helianthus annuus HOM05D000252 ORTHO05D222516 2.8e-67 258.5 127 100.0
HanXRQChr14g0432871 Helianthus annuus HOM05D044620 ORTHO05D226111 1.4e-34 149.8 81 91.4
HanXRQChr15g0492851 Helianthus annuus HOM05D044620 ORTHO05D227349 1.4e-34 149.8 81 91.4
HanXRQChr11g0329831 Helianthus annuus HOM05D055804 ORTHO05D008225 7.1e-23 110.9 98 67.3
HanXRQChr05g0137651 Helianthus annuus HOM05D000252 ORTHO05D008225 2.7e-14 82.4 80 55.0
ECA247G3881 Erigeron canadensis HOM05D005921 ORTHO05D007374 1.9e-12 76.3 80 51.2
Lsat_1_v5_gn_1_5160 Lactuca sativa HOM05D000252 ORTHO05D008225 1.9e-12 76.3 80 51.2
Glyma.02G078600 Glycine max HOM05D000252 ORTHO05D008225 3.3e-12 75.5 80 51.2
MBI04_g33334_MAGBIO Magnolia biondii HOM05D000252 ORTHO05D008225 3.3e-12 75.5 80 50.0
Peaxi162Scf00360g00617 Petunia axillaris HOM05D000252 ORTHO05D008225 5.7e-12 74.7 80 51.2
Solyc04g072034.1 Solanum lycopersicum HOM05D000252 ORTHO05D008225 5.7e-12 74.7 82 48.8
Sopen04g028040 Solanum pennellii HOM05D000252 ORTHO05D008225 9.7e-12 73.9 82 47.6
CAN.G1183.11 Capsicum annuum HOM05D000252 ORTHO05D008225 1.3e-11 73.6 82 47.6
Lj2g0016577 Lotus japonicus HOM05D000252 ORTHO05D008225 1.3e-11 73.6 80 48.8
Phvul.004G089200 Phaseolus vulgaris HOM05D000252 ORTHO05D008225 1.3e-11 73.6 80 50.0
A09p29350 Brassica napus HOM05D000252 ORTHO05D008225 1.7e-11 73.2 82 48.8
BraA09t38502Z Brassica rapa HOM05D000252 ORTHO05D008225 1.7e-11 73.2 82 48.8
EL10Ac1g01610 Beta vulgaris HOM05D000252 ORTHO05D008225 2.2e-11 72.8 82 52.4
VMungo0464G0845 Vigna mungo HOM05D000252 ORTHO05D008225 2.2e-11 72.8 82 48.8
AT4G09750 Arabidopsis thaliana HOM05D000252 ORTHO05D008225 2.8e-11 72.4 82 50.0
BcaC04g20974 Brassica carinata HOM05D000252 ORTHO05D008225 2.8e-11 72.4 82 48.8
C09p37410 Brassica napus HOM05D000252 ORTHO05D008225 2.8e-11 72.4 82 48.8
BolC9t56571H Brassica oleracea HOM05D000252 ORTHO05D008225 2.8e-11 72.4 82 48.8
Cpa.g.sc26.104 Carica papaya HOM05D000252 ORTHO05D008225 2.8e-11 72.4 82 47.6
Sp6g07750 Schrenkiella parvula HOM05D000252 ORTHO05D008225 2.8e-11 72.4 82 48.8
Sc02g0003800 Simmondsia chinensis HOM05D000252 ORTHO05D008225 2.8e-11 72.4 80 50.0
Migut.C00148 Erythranthe guttata HOM05D000252 ORTHO05D008225 3.7e-11 72.0 82 50.0
TAR381G0219 Trochodendron aralioides HOM05D000252 ORTHO05D008225 3.7e-11 72.0 80 48.8
Ah.05g168210 Amaranthus hybridus HOM05D000252 ORTHO05D008225 4.8e-11 71.6 80 50.0
AL6G43390 Arabidopsis lyrata HOM05D000252 ORTHO05D008225 4.8e-11 71.6 82 48.8
arahy.Tifrunner.gnm1.ann1.NU16HH Arachis hypogaea HOM05D000252 ORTHO05D008225 4.8e-11 71.6 80 50.0
Carub.0006s2822 Capsella rubella HOM05D000252 ORTHO05D008225 4.8e-11 71.6 82 50.0
AUR62034887 Chenopodium quinoa HOM05D000252 ORTHO05D008225 4.8e-11 71.6 82 48.8
Thhalv10028805m.g Eutrema salsugineum HOM05D000252 ORTHO05D008225 4.8e-11 71.6 82 47.6
Solyc04g072033.1 Solanum lycopersicum HOM05D000252 ORTHO05D008225 4.8e-11 71.6 82 46.3
CARHR260740 Cardamine hirsuta HOM05D000252 ORTHO05D008225 6.3e-11 71.2 82 48.8
PGSC0003DMG402025057 Solanum tuberosum HOM05D000252 ORTHO05D008225 6.3e-11 71.2 82 46.3
THA.LOC104806768 Tarenaya hassleriana HOM05D000252 ORTHO05D008225 6.3e-11 71.2 82 47.6
vmacro21129 Vaccinium macrocarpon HOM05D000252 ORTHO05D008225 6.3e-11 71.2 80 48.8
Aqoxy5G02021 Aquilegia oxysepala HOM05D000252 ORTHO05D008225 8.2e-11 70.9 80 47.5
AUR62026630 Chenopodium quinoa HOM05D000252 ORTHO05D008225 8.2e-11 70.9 82 50.0
Nn1g05994 Nelumbo nucifera HOM05D000252 ORTHO05D008225 8.2e-11 70.9 81 45.7
Nitab4.5_0000099g0270 Nicotiana tabacum HOM05D000252 ORTHO05D008225 8.2e-11 70.9 82 47.6
Prupe.8G041900 Prunus persica HOM05D000252 ORTHO05D008225 8.2e-11 70.9 80 50.0
Lalb_Chr03g0035631 Lupinus albus HOM05D000252 ORTHO05D008225 1.1e-10 70.5 80 50.0
Atru.chr13.1997 Acer truncatum HOM05D000252 ORTHO05D008225 1.4e-10 70.1 82 48.8
BcaB01g01425 Brassica carinata HOM05D000252 ORTHO05D008225 1.4e-10 70.1 82 47.6
CiPaw.15G012100 Carya illinoinensis HOM05D000252 ORTHO05D008225 1.4e-10 70.1 80 48.8
Ca_04665_v3 Cicer arietinum L. HOM05D000252 ORTHO05D008225 1.4e-10 70.1 80 48.8
Gohir.A06G111600 Gossypium hirsutum HOM05D000252 ORTHO05D008225 1.4e-10 70.1 91 45.1
Gorai.010G133600 Gossypium raimondii HOM05D000252 ORTHO05D008225 1.4e-10 70.1 91 45.1
Manes.18G095400 Manihot esculenta HOM05D000252 ORTHO05D008225 1.4e-10 70.1 84 48.8
arahy.Tifrunner.gnm1.ann1.LWF4SI Arachis hypogaea HOM05D000252 ORTHO05D008225 1.8e-10 69.7 80 48.8
Sed0027840 Sechium edule HOM05D000252 ORTHO05D008225 1.8e-10 69.7 82 47.6
unitig_0.g2072 Utricularia gibba HOM05D000252 ORTHO05D008225 1.8e-10 69.7 80 48.8
Lj7A385T61 Lonicera japonica HOM05D000252 ORTHO05D008225 2.4e-10 69.3 82 47.6
Psat0s3597g0040 Pisum sativum HOM05D000252 ORTHO05D008225 2.4e-10 69.3 80 47.5
BolC2t09362H Brassica oleracea HOM05D000252 ORTHO05D008225 3.1e-10 68.9 83 48.2
Eucgr.F04171 Eucalyptus grandis HOM05D000252 ORTHO05D008225 3.1e-10 68.9 80 46.2
Sopen04g028050 Solanum pennellii HOM05D000252 ORTHO05D008225 3.1e-10 68.9 80 46.2
TPR.G30966 Trifolium pratense HOM05D000252 ORTHO05D008225 3.1e-10 68.9 80 47.5
Manes.18G095300 Manihot esculenta HOM05D000252 ORTHO05D008225 4.1e-10 68.6 84 47.6
Potri.005G197700 Populus trichocarpa HOM05D000252 ORTHO05D008225 4.1e-10 68.6 80 47.5
ATR0322G044 Amborella trichopoda HOM05D000252 ORTHO05D008225 5.3e-10 68.2 80 48.8
PSO170G6236 Papaver somniferum HOM05D000252 ORTHO05D008225 5.3e-10 68.2 80 46.2
PSO210G0631 Papaver somniferum HOM05D000252 ORTHO05D008225 5.3e-10 68.2 80 46.2
Rhsim06G0128200 Rhododendron simsii HOM05D000252 ORTHO05D008225 5.3e-10 68.2 80 46.2
TPR.G955 Trifolium pratense HOM05D000252 ORTHO05D008225 5.3e-10 68.2 80 47.5
FvH4_2g12970 Fragaria vesca HOM05D000252 ORTHO05D008225 6.9e-10 67.8 80 48.8
FAN15G0190 Fragaria x ananassa HOM05D000252 ORTHO05D008225 6.9e-10 67.8 80 48.8
FAN24G1341 Fragaria x ananassa HOM05D000252 ORTHO05D008225 6.9e-10 67.8 80 48.8
FAN27G1385 Fragaria x ananassa HOM05D000252 ORTHO05D008225 6.9e-10 67.8 81 48.1
MD10G1036200 Malus domestica HOM05D000252 ORTHO05D008225 6.9e-10 67.8 80 50.0
Medtr6g041980 Medicago truncatula HOM05D000252 ORTHO05D008225 6.9e-10 67.8 80 45.0
Hund17493 Selenicereus undatus HOM05D000252 ORTHO05D008225 6.9e-10 67.8 82 46.3
Dinv41028 Davidia involucrata HOM05D000252 ORTHO05D008225 9.1e-10 67.4 80 46.2
PGR102G2743 Punica granatum HOM05D000252 ORTHO05D008225 9.1e-10 67.4 80 43.8
Sabra05G0150400 Salix brachista HOM05D000252 ORTHO05D008225 9.1e-10 67.4 80 47.5
Cc10_g15360 Coffea canephora HOM05D000252 ORTHO05D008225 1.2e-09 67.0 80 47.5
COL.COLO4_13738 Corchorus olitorius HOM05D002713 ORTHO05D008225 1.2e-09 67.0 80 46.2
DCAR_014320 Daucus carota HOM05D000252 ORTHO05D008225 1.2e-09 67.0 82 43.9
Gohir.D06G115900 Gossypium hirsutum HOM05D000252 ORTHO05D008225 1.2e-09 67.0 91 44.0
GSVIVG01001427001 Vitis vinifera HOM05D000252 ORTHO05D008225 1.2e-09 67.0 81 46.9
MSTRG.973 Avicennia marina HOM05D000252 ORTHO05D008225 2.0e-09 66.2 80 46.2
CsaV3_7G024450 Cucumis sativus L. HOM05D002084 ORTHO05D008225 2.0e-09 66.2 80 43.8
RcHm_v2.0_Chr6g0274101 Rosa chinensis HOM05D000252 ORTHO05D008225 2.0e-09 66.2 80 47.5
COL.COLO4_22296 Corchorus olitorius HOM05D000252 ORTHO05D008225 2.6e-09 65.9 80 47.5
Haze_17808 Corylus avellana HOM05D000252 ORTHO05D008225 2.6e-09 65.9 82 46.3
SMO147G0257 Selaginella moellendorffii HOM05D000252 ORTHO05D008225 2.6e-09 65.9 53 54.7
Thecc.08G160400 Theobroma cacao HOM05D000252 ORTHO05D008225 2.6e-09 65.9 84 45.2
FAN20G2468 Fragaria x ananassa HOM05D000252 ORTHO05D008225 3.4e-09 65.5 80 47.5
MELO3C024061.2 Cucumis melo HOM05D000252 ORTHO05D008225 7.7e-09 64.3 80 45.0
Oeu046073.1 Olea europaea HOM05D000252 ORTHO05D008225 1.0e-08 63.9 79 44.3
SEGI_33347 Sequoiadendron giganteum HOM05D000252 ORTHO05D008225 1.0e-08 63.9 82 41.5
TWI34G0678 Tripterygium wilfordii HOM05D000252 ORTHO05D008225 1.3e-08 63.5 80 45.0
Eucgr.F04169 Eucalyptus grandis HOM05D000252 ORTHO05D008225 1.7e-08 63.2 80 46.2
SalBow7G3195 Salvia bowleyana HOM05D000252 ORTHO05D008225 1.7e-08 63.2 82 43.9
CDE06G1125 Ceratophyllum demersum HOM05D000252 ORTHO05D008225 2.2e-08 62.8 80 46.2
Ciclev10001743m.g Citrus clementina HOM05D000252 ORTHO05D008225 3.8e-08 62.0 80 42.5
Zm00001eb386150 Zea mays HOM05D000252 ORTHO05D008225 3.8e-08 62.0 80 43.8
PSO135G0690 Papaver somniferum HOM05D000252 ORTHO05D008225 1.1e-07 60.5 83 43.4
HPP92_021783 Vanilla planifolia HOM05D000252 ORTHO05D008225 1.4e-07 60.1 42 64.3
Nitab4.5_0003770g0020 Nicotiana tabacum HOM05D000252 ORTHO05D008225 4.2e-07 58.5 82 40.2
PSO384G2237 Papaver somniferum HOM05D000252 ORTHO05D008225 4.2e-07 58.5 83 42.2
Duzib116G0862 Durio zibethinus HOM05D000252 ORTHO05D008225 5.5e-07 58.2 42 61.9
Os06g0590301 Oryza sativa ssp. japonica HOM05D000252 ORTHO05D008225 9.4e-07 57.4 80 38.8
QL02p037260 Quercus lobata HOM05D000252 ORTHO05D008225 1.6e-06 56.6 40 62.5
QL02p037306 Quercus lobata HOM05D000252 ORTHO05D008225 1.6e-06 56.6 40 62.5
Rhsim06G0091800 Rhododendron simsii HOM05D000003 ORTHO05D000126 2.1e-06 56.2 40 65.0
EL10Ac9g22793 Beta vulgaris HOM05D000252 ORTHO05D008225 6.1e-06 54.7 42 59.5


User provided reference genes

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